Dermacentor silvarum: 119441765
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Entry
119441765 CDS
T07348
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03020
RNA polymerase
dsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119441765
09124 Replication and repair
03420 Nucleotide excision repair
119441765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119441765
03400 DNA repair and recombination proteins [BR:
dsv03400
]
119441765
Enzymes [BR:
dsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119441765
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119441765
DNA repair and recombination proteins [BR:
dsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119441765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
119441765
NCBI-ProteinID:
XP_037562301
LinkDB
All DBs
Position
2:130594180..130659744
Genome browser
AA seq
1942 aa
AA seq
DB search
MSQIVTSDSKATLREVKRVQFGILSPDEIRRMSVTEGGIRYPEIYEGGRPKLGGLMDPRQ
GVIDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHCGFLTKTIKILRCVCFYCSKLLVNPN
NPKIKEIAGKTKGQPRKRLAHVYDLCKGKNICEGGDEIDTKLGPDSQVQEDTNKKQGHGG
CGRYQPSIRRSGLDLTAEWKHINEDSQEKKIVLTAERVWEILKHISEEECVILGMDPRYA
KPDWMLVTVLPVPPLAVRPAVVMFGSARNQDDLTHKLADIVKANNELIRNEQSGAAAHII
AENIKMLQFHVATLVDNEMPGLPRAMQKSGRPLKSIKQRLKSKEGRIRGNLMGKRVDFSA
RTVITPDPNLRINEVGVPRSIAQNLTFPEIVTPFNIDKMHDLVRRGNNQYPGAKYIIRDN
GERIDLRFHPKASDLHLQCGYRVERHVRDGDIIVFNRQPTLHKMSMMGHKIKVLPWSTFR
MNLSVTTPYNADFDGDEMNLHVPQSLETRAEVEQLAMVPRQIITPQSNKPVMGIVQDTLT
AVRKMTKRDIFLEKDQMMTILMFLPIWDGKMPMPAVLKPKPLWTGKQIFSLIIPGNVNLI
RTHSTHPDEEDDGPYKWISPGDTKVLIEHGELISGIVCKKTVGASSGSLMHVVFAELGHE
VAGAFYGHIQTVVNAWLLLEGHTIGIGDTIADKQTFIDIKNTIEKAKHDVIDVIEKAHND
ELEPSPGNTLRQTFENQVNRILNDARDKTGASAQKSLSEFNNFKAMVVSGAKGSKINISQ
VIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGG
REGLIDTAVKTAETGYIQRRLIKAMESVMIAYDGTVRNSNGQVIQLRYGEDGLDGGTVEF
QSMPTLKPSNKSFEKKFRFDTCNERYLRKVFTEDVVRELMGSATAVSELEKEWERLRKDR
EILRTIFPTGDSKVVLPCNLQRMLWNAQKIFRVNLRAPTDLSPLRVVQGVEELVKKLVIV
PGEDHLSIQANENATFLFRALLRATLCSKRVAEEFRLSTESFEWLLGEIETRFHQSQGQP
GEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFL
TGAAARDAEKAKDVLCRLEHTTLRKVTANTAIYYDPDPQNTVISEDQEFVNVYYEMPDFD
PTRISPWLLRVELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMN
SDDGKFQDEEEQVDKMEDDVFLRCIEANMLSDMTLQGIEAITKVYMHLPTTDNKKRIVLT
ETGEFKAIAEWLLETDGTSLMRVLSERDVDPVRTYSNDICEIFAVLGIEAVRKAVEKEMN
HVISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAA
SHAEVDYLKGVSENIIMGQLARMGTGAFDLMLDAEKCKYGIEIPMNLPGMMGSLCGPGVF
FGSAATPMAGMSPQMTPWATGATPAYGSGWSPNVGSGMTPGGAGFSPSASSDASGFSPGA
CSPAWSPQPGSPASSPASPYIPSPSSPNYSPSSPAYAPSSPSLTPASPTYSPTSPSYSPT
SPSYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYS
PGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSP
QYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPG
YSPSSPTYSPTSPNIEEDSDND
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagatcgtgacctccgactcaaaggctaccttgcgggaggtgaagagggtgcaa
tttggcatcctcagccccgatgaaatacggcgcatgtcagtgacagaagggggcatcagg
tatcctgaaatctatgagggcggcaggcccaagctgggaggcctcatggacccccggcaa
ggggtcatcgaccgcacctcgcgatgccagacgtgcgcgggcaacatgaccgaatgccct
ggccactttggccacattgacctggccaagccggtgttccactgtggcttcctcaccaag
accatcaagatactgcgatgcgtgtgcttctactgctcgaagctgctcgtcaaccccaac
aatcccaagatcaaggaaatcgcgggcaagacaaaggggcagccacgcaagcgcctggca
cacgtctatgacctctgcaaaggcaagaacatttgcgagggaggtgatgaaatcgacacc
aagcttgggcccgacagccaggttcaggaggacacaaacaaaaagcagggccatggtggt
tgtggccgctaccagccaagcatccgtaggagtggcctggatttgacggctgagtggaag
cacatcaatgaagactctcaggagaagaagattgtcctgacagctgagcgcgtctgggag
atcctcaagcacatctctgaggaggagtgtgtgattcttggcatggaccctcgctatgcc
aagcccgactggatgctggtcacggtcctgccggtgcctccgctcgctgtgcgaccagct
gtcgtcatgttcggctctgcccggaaccaggatgacttgacacacaaactggccgatatt
gtcaaggcaaacaacgagctgatccgcaatgagcaaagtggagcagctgcccacatcatt
gcggagaacatcaagatgcttcaattccacgttgcgaccctggtcgacaatgaaatgcct
ggtctaccccgggccatgcaaaaatctggccgtccgctgaagtccatcaaacagcggctg
aaaagcaaagaagggcgtattcgaggcaacctcatgggcaagcgagtcgacttttcggcc
cggacggtcatcacccctgacccaaacctgcgtatcaacgaggtcggagtacctcgctcc
attgcccagaacctcacgtttcccgagattgtcactccattcaacattgacaaaatgcat
gacttggtgaggcgaggaaacaaccagtaccctggggccaaatacatcatccgggacaat
ggtgaaagaattgatctccggtttcaccccaaggccagtgaccttcatctccagtgtggc
taccgggtggagcggcacgtccgggacggtgacatcattgtgttcaaccgtcagccgacg
ctgcacaaaatgtccatgatggggcataagatcaaggtgctgccttggtccacattccga
atgaacctcagtgtgacaacaccgtacaacgctgattttgacggagacgagatgaacttg
cacgtgccacagtcgctggagacgcgtgccgaggtggagcagctggccatggtgccccga
cagattatcacacctcagtccaacaagcccgtcatgggtattgtgcaggacacactcact
gctgtccgaaagatgaccaagcgggacatctttcttgagaaggaccagatgatgacgatc
ctcatgttcttgcctatctgggatggcaagatgcccatgccagctgtgctgaaacccaag
cccctgtggacgggcaagcagatcttttcgctcatcatccccggcaatgtgaaccttatc
cgcacgcacagtactcacccggatgaggaggatgatggaccctataagtggatatcgccg
ggtgacaccaaggtgctgattgagcatggggagctgatcagcggaatagtgtgcaagaag
acagtgggtgcctcgtcgggctcgctgatgcacgtggtgtttgccgaactgggccacgaa
gtggcaggggccttctacggccacatccagacggtggtcaatgcctggctgcttttggag
ggccacaccatcggcattggtgataccattgccgacaagcagaccttcatcgacatcaag
aacaccatcgagaaggccaagcacgacgtgatagacgtcatcgagaaggcccacaacgac
gagctggagccctcgccaggaaacaccctcaggcagaccttcgaaaaccaggtcaaccgc
atcctgaacgatgctcgtgacaagactggtgccagcgcccagaagtccctgtctgaattc
aacaacttcaaggccatggtggtctctggagccaagggctctaaaattaacatatctcag
gtcattgcctgtgtgggtcaacagaacgtggaaggtaagcggatccctttcggcttccgc
aagcggacgctgccccacttcatcaaagacgactacggtcccgagagtcgtggcttcgtt
gagaactcctacctggccggtctgaccccttccgagtttttcttccacgccatgggagga
agagagggtctcattgatactgctgtcaagactgccgaaacaggttacatccagcgtcgt
ctgatcaaggctatggagagcgtgatgatcgcctatgacggcacggtgcgaaacagcaac
ggccaggtgatccagctgcgttacggagaggatggcctcgacgggggcaccgtcgaattc
cagagcatgcccacccttaaaccttcgaacaagtcttttgagaagaagttccgcttcgac
acttgtaacgagcgatatctgcgtaaggtgttcactgaagacgtggtgcgtgaactcatg
ggcagcgccacagctgtctctgagctggagaaggagtgggaacggctcaggaaggaccgg
gaaatattgcgaaccatctttcctacgggtgacagcaaggttgtgctaccgtgcaacctc
cagaggatgctctggaatgctcagaagattttccgggtgaacctgcgtgcacccacagac
ttgtctcctctcagggtagtgcaaggtgtggaggagctggtgaagaaactagtcattgta
cctggtgaggaccacttgagcatccaggccaacgagaacgccacgttcctgttccgtgca
ctgttgcgagccactctgtgctctaagcgtgtggccgaggagttcagactctccacggag
tcgttcgagtggctgctgggcgagattgagacccggttccaccagtcacagggccaacct
ggtgagatggtgggtgccctggccgcccagtctctgggtgagccggccacccagatgacc
ctaaacactttccactacgccggtgtgtcagccaagaacgtcacactgggtgtgccccgt
ctgaaagagatcatcaacatctccaagaagccgaagacaccctcgctcactgtcttcctg
acgggtgccgctgcacgagatgctgagaaggccaaggacgttctgtgccggttggagcac
acaaccctgcgcaaggtgactgccaacacagccatctactacgatcccgacccacagaac
acggtcatatcggaggaccaggagtttgtaaacgtctactatgagatgcccgacttcgac
cccactcgcatatcgccctggctgctccgtgtggagctggaccgcaagcgtatgacggac
aagaagctcaccatggagcagattgccgaaaagatcaacgctggttttggtgatgacctc
aactgcatcttcaatgacgacaacgccgagaagctggtcctacgtatacgaatcatgaac
agcgatgatggcaagttccaagatgaggaagaacaagtggacaagatggaggacgatgtc
ttccttcgttgcattgaggccaacatgctgagtgacatgactctgcaaggcattgaagct
atcactaaggtgtacatgcacctgcctaccacagacaacaagaagcgcattgtccttacc
gagactggcgagttcaaggccattgccgagtggcttcttgaaactgacggcacaagcctc
atgcgagtgctgagcgaacgggacgttgaccctgtccggacatactctaacgacatttgt
gagatcttcgctgtgctgggcattgaggcagtccgaaaggctgtagagaaggagatgaac
cacgtcatctcgttcgacggttcgtacgtcaactaccgccacttggccctcctgtgtgat
gtgatgaccgccaagggacatctgatggccatcacacgtcatggaatcaaccggcaggac
acgggggccctcatgaggtgttcctttgaagagactgttgatgtgctcctggatgctgct
tcacatgctgaggttgactacctgaaaggtgtctctgaaaacattatcatgggacagctg
gcacgtatgggcacaggggcatttgacctgatgcttgatgccgagaagtgcaagtacggc
attgagattcccatgaacctgcctggaatgatgggatccctctgtggccctggagtgttc
tttggtagtgcagccacaccgatggctgggatgtcccctcagatgacaccatgggctact
ggtgccactccggcttacggcagtggctggtcacctaacgtgggaagtggcatgacacca
ggaggtgctggcttctctccctctgcatcaagtgatgctagtggcttcagccctggtgcc
tgcagccctgcatggtcaccgcagccgggttcgccagcctcgtcacctgcgtcaccttat
atacccagccccagctctccaaactactcgccctcttcacctgcttatgcaccttcttcc
ccctctctcactcctgcctccccaacctattccccaacatctccatcctactctcccact
tctccgtcctattcgccaacgtcacccacatactcgcccacttctcccaactactctccc
acatcaccaagttactcgccaacctctccctcctactccccaacaagccccagctactcc
ccaacatcaccatcctactccccgacatcaccgtcctattctccaacaagcccgagctac
tctcccacttcgccatcctactcgccaacttccccatcttactctcctacgtctccttct
tattcccccacttctccatcctactctccgaccagtcccagctattccccaagctctccg
aactacacccctgcatcaccttcctactcgccaacctcgccttcttactccccaacctca
ccttcttactctcccacttctccatcctactccccaaccagcccatcctactcccctagt
tctcccaactattctcctcaaagtcctagctactcaccaggtagtcccagctactctcca
agcagtcccaagtactctccaacctctccctcttactctccgacaagtcctagctattct
cctggctcaccccagtacacgccgtcgtcccccaagtactctcccacttcgccaacatat
tcgccaacgtctccatcgtattctccgtcaagtccgaagtattctccaacgagtccaaag
tactcaccgacaagccccacctacacgccttcgtcgcctaagtatagcccgacctcacct
cagtacagtccaacgtcaccacagtatagccccacgtctccgaagtactctccgacgtca
ccgaagtattctccaacgtcgccaacatattccccgacatcaccgaagtattcacctact
tcacctacttactctcccacaagtcccaagggatcaagctactccccaaccagtccgggc
tactccccatcctcgccgacttatagcccgaccagccccaacatagaagaggatagcgac
aatgactaa
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integrated database retrieval system
