Dermacentor silvarum: 119441936
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Entry
119441936 CDS
T07348
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03022
Basal transcription factors
dsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119441936
09124 Replication and repair
03420 Nucleotide excision repair
119441936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119441936
03400 DNA repair and recombination proteins [BR:
dsv03400
]
119441936
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119441936
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119441936
DNA repair and recombination proteins [BR:
dsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119441936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
Motif
Other DBs
NCBI-GeneID:
119441936
NCBI-ProteinID:
XP_037562535
LinkDB
All DBs
Position
2:complement(154561837..154594510)
Genome browser
AA seq
777 aa
AA seq
DB search
MGKTKGAKRWKKRQEFEENTTEEPGDDDDGNGDGVPAAASQKLSTAATEDEFGAKDYRSQ
MELRPDHTSRPLWVAADGHVFLEAFSPVYKHAHDFLIAISEPVCRPHHIHEYKLTSYSLY
AAVSVGLQTQDIIEYLRRLSKTSIPEGIIEFIKLCTVSYGKVKLVLKHNRYFVESPFPDV
LQKLLKDPVIQACRLRRDAENDTDLSVVTRDILSATLPIKTHATEDKADDKVQAASVPDD
ITAFYEKMEKDEDDVEDSQTVSFEVNQDYIEKLQKRCIELEYPLLAEYDFKNDTVNPDIH
VDLKPSAILRPYQEKSLRKMFGNGRGRSGVIVLPCGAGKSLVGVTACCTVRKRCLVLCNS
GVSVEQWKAQFKMWSTADDSVICRFTSEAKDKPMGCGICITTYSMITHTQRRSWEAEQVM
AWLKEQEWGLMLLDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIQDLNFLIGPK
LYEANWLELQNNGYIAKVQCAEVWCPMTPEFYREYLQARACKKMLLFVMNPNKFRACQFL
IKYHERRNDKIIVFSDNVFSLKHYAIKMNRPYIYGPTSQQERMQILQNFKYNPKVNTIFV
SKVADTSFDLPEANVLIQVSAHGGSRRQEAQRLGRILRAKKGAVAEEYNAFFYSLVSEDT
MEMHYSRKRQRFLVNQGYSYKVITKMEGMDEEDLAYRTKEEQTNLLQQVLAANDADAEEE
RVAGETGPTGHRVQMSRRTGNMSSMSGADSAVYLEYRTDKKKDMGLRHPLFKRFRKT
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaactaaaggtgcgaaacgctggaagaaaaggcaagaatttgaagaaaacacg
acagaagaaccgggcgatgacgacgatggaaacggagatggagtgcctgctgctgctagc
cagaaactcagcaccgctgcaacggaagacgaattcggggccaaggactatcgttcacaa
atggaacttaggcccgatcatacatctcgtcctctttgggtggctgctgatggccatgtc
tttttagaagccttttcaccggtgtataagcatgcgcacgattttttgatagctatatct
gagccagtttgcaggccacaccacattcacgaatacaagctgacatcctattccttgtat
gctgcagtctctgtcggacttcagacgcaagacatcatagaatacttaaggagacttagc
aagactagcattccagagggtatcatagagttcataaagctttgcactgtcagctatggt
aaagtcaaacttgtcttgaagcacaatcggtactttgtggaaagtcctttcccggatgta
ctccagaagcttctcaaggatccagttatacaggcatgccgcttaaggcgggatgcagaa
aatgacacagatctgagcgttgtcacgagggatattctaagtgccacacttcctatcaaa
actcacgctacagaggacaaggctgatgacaaagttcaagcagctagcgtccctgatgac
attactgccttttatgagaaaatggagaaagatgaagatgacgtagaagactctcaaaca
gtgtcatttgaagtcaaccaagactacattgagaagttgcaaaagagatgcatagaactt
gagtatcctttgttggccgagtacgacttcaagaatgacactgtcaacccagatattcat
gttgacctgaagccatctgccatactccgaccatatcaagagaagagcttgagaaagatg
tttggaaatgggcgaggaagatcgggggttattgtccttccatgcggtgctggaaaatcg
ctggtgggtgtcacagcctgctgtaccgtacgcaagcgatgccttgtcttgtgtaactcg
ggcgtgtccgtcgaacagtggaaagcacagttcaaaatgtggtcaacagcagacgacagc
gtcatttgcaggtttacatcagaggccaaggacaagcctatgggctgtgggatctgcatc
actacatattccatgatcacgcacactcagagacgttcctgggaggccgagcaggtcatg
gcttggctgaaagagcaggagtgggggctcatgctgcttgatgaggtgcacaccattcca
gccaagatgttcaggcgagtgttgacaatagtacaagcacactgcaagctgggtctaaca
gccacactggtccgagaagatgacaagatccaggatctcaactttctcattggcccgaaa
ctgtacgaagctaattggctggagctccagaacaacggttacattgccaaggtgcagtgt
gccgaggtgtggtgcccaatgacaccagagttctacagggagtatctgcaagcaagagcg
tgcaagaagatgttattgttcgtcatgaacccaaacaagttcagggcctgccagttcctc
attaaatatcacgaaaggcgaaacgacaagatcatagtattctctgacaatgtcttttcc
ctcaagcattatgccatcaagatgaacaggccatacatctatggtcctacatcccagcaa
gagcgaatgcaaatcctccaaaacttcaagtacaatcccaaagtgaacaccatctttgtg
tccaaggtggccgacacctcttttgatttgccagaggccaatgtcctcatccaggtgtcc
gctcacggaggctccaggaggcaggaggctcagcgattgggtcgtatcctcagggccaag
aaaggtgccgtggctgaagaatacaatgccttcttctattccctggtgtctgaagacact
atggagatgcattactcacgaaagagacagcgcttcctggtgaaccaaggctacagttac
aaggttattaccaagatggaaggcatggacgaggaggaccttgcgtaccgcactaaggaa
gagcagacgaacctgttacagcaggtgctagctgccaatgatgctgatgcagaggaggaa
cgcgttgctggcgagaccggtccaactggccaccgtgtccagatgtcgagaagaactgga
aacatgagctccatgtctggcgctgacagtgcagtgtacctggagtacaggactgataaa
aagaaggacatgggcctgaggcatccacttttcaagcgtttccggaaaacttag
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integrated database retrieval system
