Dermacentor silvarum: 119442184
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Entry
119442184 CDS
T07348
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
dsv
Dermacentor silvarum
Pathway
dsv03013
Nucleocytoplasmic transport
dsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119442184
03015 mRNA surveillance pathway
119442184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119442184
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119442184
mRNA cycle factors
P-body specific factors
119442184
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
119442184
NCBI-ProteinID:
XP_037562882
LinkDB
All DBs
Position
2:175591367..175615771
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AA seq
586 aa
AA seq
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MTQEKAKDECSPRSRSSSEASKSKEKKDKSFLTKVVIRRLPPTMTEDQFLEQISPVPESD
YMYFVKGDLSLGPHAFSRAYINFVNQDEIFIFKEKFDDYIFVDEKGNEFPALVEYAPFQK
IPKRRTRKKDPKCGTIEQDPEYIKFLESLEQPEEVTLPSIDTYIEEIEAREKEIKANNGC
LKVVTPLIEYLQQRKLEKLKLREERREERKRREVEKKRLRDEEKRRRKVDRDRATKEPSI
HRESSSARYDDDLAQFDDAEPAPTKPPVVKSSAKSSRRQQGPASSELRRGPPVQPVDSTE
SRNHSATVGHDRSHRESLDQKPAGRSVSARRAKGDRAAKNEHVPAVLKVLSVVGRASRES
PTSNKRLVQPVVLRNPVREHEPPAATTPKDSGTGVVPKSSAGTGGSHSKAPPVRSSTGGG
SSARKDWDRPKLPRPSKDYPSSKEYSKHKAEQPASSHSRRGSTGSDGRGQETSTPKASAT
TPATDDERSVVESSRGVTSTTSLPAEGKNTSSEKDRERPSAPEESSQSRAKDPRAERRIR
NKDRPSIEIYRPGMRRLSQKGTSSQEETPAASSKPPKSNSSSKPPA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggagaaagcgaaagatgaatgctcgcctcgaagtcgcagctcgagcgaggca
tccaagtctaaggagaagaaggacaagtcatttctcacaaaggttgtaatccgaaggctg
ccgccgacgatgacggaagaccagttcctggagcagatatcccctgttcctgaaagtgat
tacatgtacttcgtcaaaggagacttgagtctcggcccacacgcgttctcgagggcctac
atcaacttcgtcaatcaagatgagatattcatcttcaaggagaagttcgacgattacatt
tttgttgatgagaaaggcaatgagttcccagcccttgtcgagtatgcacccttccaaaaa
atacccaagcggaggactcgcaagaaagatccaaagtgtggcacaattgaacaagaccca
gagtacatcaagtttctggaaagcctagagcaaccggaagaagtgacactaccttcaatt
gatacctacatagaggagattgaagctagggaaaaagaaatcaaagctaacaatggctgc
ctcaaggtggtgacccctctaattgaatatttgcagcagaggaagctggaaaagctgaaa
ttgcgcgaggagcgtcgggaggagcgcaagaggcgggaggtggagaagaaacgtttgcga
gatgaggaaaagaggaggcggaaggtggaccgcgaccgtgcaacgaaggagccaagcata
caccgagagtcatcttcagcccgctatgatgatgaccttgcccaatttgatgatgctgag
cctgcaccaactaagcctccggtggtcaagtcttctgccaaatcatcacgacgacagcag
ggcccagccagctccgagttgcgccgtggtccgccagttcaaccagtcgacagcactgag
tcccgcaatcactcagcgacagttggtcatgaccgatcacatcgggaatcgttggaccag
aaacctgcaggcaggtcagtgagtgctcgaagagcaaagggagaccgcgctgcaaaaaat
gagcatgttccggcagtcctcaaagtgctcagtgtggttggccgagcttctcgagaaagt
ccgacttcgaacaaacgtctcgtgcagcctgtggtgctgaggaaccctgtgcgagagcat
gagccaccagctgcgacaacgccaaaggactcgggaacaggtgtagttccgaaatcaagt
gcaggcacgggtggcagccattccaaggccccaccggtgcgcagttcaacgggcggcggc
agcagtgcacgcaaggactgggatcgacccaagttgcccaggcccagcaaggactacccg
agttccaaagagtacagcaaacacaaggccgaacagcctgcatcctcccatagcaggcgc
ggatcgacaggttcagatggcagaggccaggaaacaagcaccccgaaagcatcggcaacg
actccagccacagatgacgagcgatccgttgttgaaagctctcggggtgttacatccacc
acaagccttccggccgagggcaagaacactagttcagagaaggatcgcgagcgaccatcg
gcacccgaggagtcctcgcagtcccgagctaaagacccgcgagcagagaggaggatacgc
aacaaggatcgaccatctattgagatttaccggcctggaatgagaagactgtctcaaaag
ggcacatcatcacaagaggaaacaccagctgccagctcaaaaccaccaaaaagcaacagc
agtagcaagccacctgcttaa
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