Entry |
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Name |
(RefSeq) ATP-dependent RNA helicase DDX42-like
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dsv00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119442816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:dsv03041]
119442816
Enzymes [BR:dsv01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119442816
Spliceosome [BR:dsv03041]
Complex A
U2 snRNP components
U2 snRNP specific factors
119442816
Complex B
119442816
Complex C
U2 SnRNP specific factors
119442816
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:228469109..228510574
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AA seq |
880 aa
MFHKGGEGRPKGFGFGSFAVSSKKSDSQLGRSALQPETTPVPALPVVNRRGYTGLSTITQ
NALDINYGNLRKRPKTEEEYFEQDEEDGRGGQLAYIPAPGSPTWDEQQRREKQQNSSESE
EDPLDAFMADIEKNLKKDKKPSLSKNSKMPEKETKSKDELKGVRDDIENEDDEESYYRYI
EENPNAGADKDDSDIELEYDEDGNPIAPVKSKYIDPLPPIDHSTIKYTEFTKNFYEEHKE
IAALSDAEVDQLRATLGVKVTGAIPPKPVTSFGHLGFDEAMLKAIRKAEYTQPSPIQAQG
VPVALSGRDMIGIAKTGSGKTAAFIWPLLTHIMDQRELAPGEGPIGLILAPTRELAQQIY
LEAKRFGKVYGVAAACCFGGGSKWEQSKALQEGAEIVVATPGRMIDMIKMKATNLERVTF
LVLDEADRMFDMGFEPQVRSICDHVRPDRQTLMFSATFKRKVERLARDVLTDPIKVVQGD
VGEANEDVTQIVLVMPSNPPTSKWNWLTTHLVEFTSVGSVLIFVTKKANAEELANNLKAH
DHNVGLLHGDMEQNDRTKVIASFKKKEFPILVATDVAARGLDIPHVKTVVNYDIARDIDT
HTHRVGRTGRAGEKGVAYTLIMDKEKEFAGHLVRNLEGASQHVPQQLMDLAMQSQWFKKS
RFKQGNGKKLNVGGHGLGFRTRERPGLGSANSSGGLQRQAPAAGPMAGLGSYTASVLSGP
RFVAASGNKTSSDISASSNVTSSASMPRHGAGPQTDRLSSMRAAFQAQYKSQFTAATDTS
WKLGLPRSPPRRPPSPPRHAPFTPPVPFAVPSPLQFTSPASKTEAHQDSQGSDSSTRPHS
QDSSSQHRSFGSDSGQQQGQQPSGTSKEERRKNRKSRWDC |
NT seq |
2643 nt +upstreamnt +downstreamnt
atgttccacaaaggcggcgaagggcggcctaaaggttttggcttcggaagcttcgcggtt
tcttcaaagaaatccgattcgcagcttggtcgcagcgctttgcaaccagaaacgacacct
gtgcccgcattgccggttgttaaccggcgtggctacactggcttgagcactataacgcaa
aacgctttagatatcaactatggaaaccttcgcaagcggccgaagaccgaagaagagtac
tttgaacaggatgaggaagatggccgtggaggtcagttggcatatataccagcccctgga
agccctacatgggatgagcagcagcgtcgggagaaacagcagaattcctctgagagtgag
gaggaccctttagatgctttcatggctgatattgagaaaaacctgaagaaagataagaaa
ccttcgttatccaagaacagcaagatgcctgaaaaggaaaccaaatcaaaggatgaactg
aagggtgtccgtgatgacatagaaaatgaagatgatgaagaatcctactatcgttacatt
gaagagaaccctaatgctggagcagacaaggatgacagtgacattgagctggagtatgat
gaggatggcaatccaattgcccctgtcaagtcaaagtacattgatccactgccacctatc
gaccactcaaccatcaagtacacggaattcaccaagaacttctacgaggaacataaagaa
atagctgcgctcagtgatgctgaagtggatcaattgcgcgcaacgttgggtgtcaaagtg
acaggagctattccaccaaaacctgtgacaagttttggtcatctgggatttgacgaagca
atgctcaaggctatccgcaaggcagagtacacacaaccctcacccatccaagcacaggga
gtcccagttgcactgagtggcagagacatgattggcattgccaagactggctcaggaaag
acagctgctttcatctggcccctcttgacacacatcatggatcagcgggagctcgcacca
ggggaaggtcccattggcctgattttagcaccaaccagggagctggcccaacagatttat
ctcgaagccaagcgctttggaaaagtgtatggtgtagctgctgcctgctgttttggtggt
ggcagtaagtgggagcagtccaaggcactccaggaaggagctgagattgtcgtcgccacc
cctggtcgcatgattgacatgatcaaaatgaaagccactaacctggagcgtgttacattc
ttggtgctggatgaagcagaccgcatgtttgacatgggctttgagccccaggtgcgttcc
atctgtgaccatgttcgtcctgacaggcagaccctcatgttcagtgctacattcaagcgc
aaggtggagcggctggcacgcgatgtgcttacggacccaatcaaggtggttcagggtgat
gtgggagaagctaacgaagatgtgacacaaattgtgctcgtgatgcctagcaacccacca
acgtccaaatggaactggctcaccacacacttggtggaattcacctcagttggcagtgtt
ctcatctttgtcaccaagaaggcaaatgcagaggagctggcaaacaatcttaaagctcac
gaccacaatgtgggtcttctacatggagacatggaacagaatgacagaaccaaggtgatt
gcttctttcaagaaaaaggagtttcctattcttgtggccacagatgttgctgcacgtggt
ctggacatcccccacgtaaagactgtggtgaactatgacatcgctcgtgacatcgacacc
cacacgcacagagttggcaggactggccgtgcaggtgagaaaggggtggcatacacactg
atcatggacaaagagaaggagtttgctggccacctcgtgcgtaacttggaaggggccagc
cagcacgtacctcagcagctgatggaccttgccatgcagagccagtggttcaagaaatca
cgcttcaaacaaggcaatggcaagaaactcaatgtgggaggccatggacttggtttcaga
acaagggagcggccgggccttggcagcgccaacagtagtggtggactccagaggcaggct
cctgcagctggacccatggctgggctgggcagctataccgcgagtgtgctctcaggaccg
aggtttgtggctgcttcaggaaacaagacttcctctgacattagtgccagcagcaatgta
acctcatccgcctccatgcctcgccacggggccggtcctcagacagataggctgtcctcc
atgcgggcagctttccaggctcagtacaagtctcagttcacagcagctacggacacttcg
tggaagctcggactgccacgttcaccaccccgtcgaccaccttcgccaccgcgccacgca
ccgttcactcctcctgttccattcgctgtaccttcgccactgcagtttacgtcaccagcc
tccaagaccgaggcacatcaagattcacaagggagcgactccagcactcgtcctcattct
caggacagttcgagccagcacagatctttcggctcagactcggggcagcaacaaggacag
cagccgagtggcacctctaaagaggaaaggcggaagaacaggaagtcacgctgggattgt
tag |