Dermacentor silvarum: 119445387
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Entry
119445387 CDS
T07348
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv04120
Ubiquitin mediated proteolysis
dsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119445387
04120 Ubiquitin mediated proteolysis
119445387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsv04121
]
119445387
Enzymes [BR:
dsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119445387
Ubiquitin system [BR:
dsv04121
]
Ubiquitin ligases (E3)
U-box type E3
119445387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
119445387
NCBI-ProteinID:
XP_037565622
EnsemblRapid:
LOC119445387
LinkDB
All DBs
Position
3:complement(24660759..25102559)
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AA seq
994 aa
AA seq
DB search
MCCAVPTIAVATTRAAVPSMSELTPDELRRRRLARLAVSGLCSQDAMETEEEDGHNKSVA
SDGGIDSMETDEPAPDRPPTTAAAVSKSSEDLQACLTELLGASSLELLCSRQLPAAELVQ
LCLAENVQRVRLQAARADEGRRQVLEYLLSCYDRAGLQERTNPRAPPALQEVRTQTVRLA
VLLLQGILTGPSGSWKGSPLLDPLLEQRLPRGFLREMLDVAAGDRTCMCEVFVPLVRGVV
ERMRSCSLQSELFRAPLAALVELTQLRRNGWPICQLMVDDPLWLPTPITASGGRELSRLS
LLGPFLALSPFAEDEPSLVRAYYEDRDPEHIQLAHQTLQAKLEAARAQLHVAMRTLLLSS
REAVLTWLGAVLKANERRCQLQVEPRQVASDGFMLNLAAVLQLLALRVQPDKVDPEYPLC
QGARVDITADTRLCLTAQEAEQFTEEIRFRRPKREAANFSTECLFLALQAAHLGVVPAMA
RYGRRLRVLRELQRLAQEMAAAQPLWEASPAAGRNRRLLAKWRGQARRVAQSKLCADAGL
LDPLLLSRCLGLYNLAAAVFLAVLQSAPMDAPALPKLLAAYPEWYIEDIADFLLFVIQYQ
PQAVEATEAPLVQLLAQLLCAADRLGKPYLSAKLVEVLFCATVAAGGCGQLAGRLLDLPC
AQQQLGPALMRFYTDVESTGAASEFYDKFTIRYHISVLLKALWERPQHREAILAEASRAG
RQFVRFVNMLMNDTTFLLDESLESLKRLHQAAAMDWDALPPGEQQGRRRQLALDERQCRS
YLTLARETVDTLHYLTAHVPDPFLRPELVDRLAAMLNSNLGQLCGPRCKDLKVAQPEKYG
WEPRRLLDQLTDVYLHLDFPPFLAAVARDERSYQPQLFADAAARMRRACVKPQPRLEQFE
QLVARIAAAAEQARRQADYADAPDEFRDPLMDTLMEEPVVLPSGHVVDKATIVRHLLNSS
TDPFNRQPLTEDMLRPDEELRQRITEWKQSRSGQ
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtgctgtccctactatagctgtagccactactcgagcagctgtgccaagtatg
agcgaactgacgcccgacgagctgcgcaggcgacgcctggcacggctagctgtgagtggg
ctgtgctcgcaggacgccatggagacggaggaggaggacggccacaacaagagtgttgcg
tctgatggaggcatcgacagcatggagacagacgagccagccccggacaggccacctact
acagcagccgcggtgtccaaaagtagtgaggacctgcaggcctgcctaacggaactgctg
ggagcatcatcgttggaactgctttgttccaggcagctgcctgctgctgagctcgtgcag
ctgtgtctggcggagaacgtgcaaagggtccggctgcaggctgcaagggctgacgaaggt
cgcaggcaagtgctcgagtacctgctctcctgctacgaccgtgcaggcctccaggagagg
accaacccccgggccccccccgcattgcaggaggtacggacacaaacagtgcggctggcc
gtgctgctgttgcaaggcattctgactggacccagtgggtcgtggaaaggcagccccctg
ctggatcccctgctggagcagcggctgccccgtggattcctccgagagatgctggacgtg
gctgccggtgaccgcacctgcatgtgtgaggtgtttgtgcctctggtgcgaggtgtggtg
gagcgtatgcggagctgctccctccaatcggagctgttccgtgcccccctggctgctctg
gtggagctcacgcagctgcgccgtaacggatggcccatctgccagttgatggtggacgac
cccctgtggctgccaacgcccatcacggccagtggaggccgcgagctgagcaggctctcg
ctgcttgggcccttcttggccctgtcaccttttgcagaggatgagcctagcctggtgcgt
gcttactatgaggaccgggacccagagcacattcagctggcccaccagacgctgcaggcc
aaactggaggcagccagggcgcagcttcatgtggcgatgcgcaccctgttgctgtcgagc
cgcgaggcggtgctcacctggttgggggcggtgctcaaggccaacgagcggcgctgccag
ctccaggtggagccccgacaggtggcctcggatggattcatgctcaacctggccgctgtg
ctccagctgctcgcactccgggtacagccggacaaggtggaccctgaatacccactctgt
cagggggcacgggttgacatcacggccgacacccgcctttgcttgacggcccaggaggcg
gagcagttcactgaggagattcggtttcggcgacccaagagagaggcggccaacttttcg
acggagtgtctgttcctggcactgcaagcggcccacttgggcgtggtgcccgcgatggcc
cgctatggacgccggctgcgggtcctgcgggagctgcagcggctcgcccaagagatggcc
gccgcccagcccctgtgggaggcaagccccgctgccgggcgcaaccgtcgcctgctggcc
aagtggcggggccaggcccggcgagtggcccagagcaagctgtgcgccgatgcggggctc
ctggaccccctgctgctgagccggtgcctgggcctgtacaacctggccgccgccgtattc
ctggccgtgctccaatcggccccaatggatgcacctgcattgcccaagctgttggcggcc
taccccgagtggtacatcgaggacatcgccgacttcctgctcttcgtcatccagtatcag
ccgcaggcagtggaagcgactgaggcacccctggtgcagcttctggcacagctgctctgc
gcagctgaccggttgggcaagccctacctgagcgccaaactggtcgaggtgctgttctgt
gccacggtggcagcaggcggctgtggccagctcgctgggcggctgctcgatctgccctgc
gcccagcagcagctgggacccgccctcatgcgcttctacacggatgtcgagtccacgggc
gccgcttccgagttctatgacaagttcaccattcgctaccacatcagtgtgctgctcaag
gccctgtgggaacggccacaacaccgggaggcaattctggccgaggcatcacgggcaggc
cgccagtttgtgcgctttgtcaacatgctgatgaacgacacgaccttcctgttggacgag
tccctggagagcctcaagcggctgcaccaagcggctgcaatggactgggatgcccttcca
cctggtgaacagcaggggcgccgccggcagctggccctggatgagcgccagtgccgctcg
tacctgaccctggccagggagaccgtggacacgctgcactacctgactgcgcacgtgccc
gaccccttcctgcgacccgagctggtagaccggctggcagccatgctcaactcaaacctt
ggccaactgtgtgggccacgctgtaaggacctcaaggtggcgcagcctgagaagtacggc
tgggagcccaggcggctgctggaccagttgaccgacgtttacctgcacttggacttccca
cccttcctggcagctgtagcgcgcgacgagcgctcatatcaaccgcagctgttcgcagat
gcagcagcgcggatgcgacgagcctgtgtcaagccgcagccgcggctcgagcagtttgag
cagctggtggcacgcattgcagccgctgccgagcaggcacggcgccaggccgactatgcc
gacgcgcccgatgaattccgcgacccgctcatggacacgctcatggaggagcctgtggtg
ctgcccagtggccacgtcgtcgacaaggccaccatcgtgcgccacctactcaactccagc
acagacccgttcaacaggcagcccctcacagaggacatgctacgaccggatgaggaactc
cggcagcgtatcactgagtggaagcagtcccggtcaggccagtga
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