Dermacentor silvarum: 119445845
Help
Entry
119445845 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119445845
03036 Chromosome and associated proteins [BR:
dsv03036
]
119445845
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119445845
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119445845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
SH2
HHH_9
Tex_YqgF
HHH_3
Spt6_S1
Tex_N
Motif
Other DBs
NCBI-GeneID:
119445845
NCBI-ProteinID:
XP_037566076
LinkDB
All DBs
Position
3:141040174..141121829
Genome browser
AA seq
1715 aa
AA seq
DB search
MADFLESEAEESDDEEVTGKRPLVDDDDEEEEEEEDDDERLREEMKDLINDEEEEVEEDS
DDDVGGKKKRRHHDDFDDNLEDEDYDLIEENLGVKVQRKKKFKRVRRIEDEESDNEESKD
STNRDAIANELFEGSDAEAAAEQDEERGEGEEEEREGSGSELESDPDDFIVDDDGQPITK
GKKKRHIKYTDQALQEAQDIFGVDFDFDEFSKYQDDYDEEMEEEEYEDEEEEGETRPRPK
KTSRKRQTKKSIFEVYEPVELERGHFTDRDNEIRTTDVPERFQLRAVPVTSASEEEIARE
AEWIYKHAFGNPTISVQSAVDEGAKGSSAASDLAGRHQPPAGRKSVTAVAKIAEALKFMR
NQLFEVPFIAFYRKEYVEPDLNINDLWTVYKWDEKWCQLQQRKKNLQQLFQRMQEFQCDQ
ILQEDPDKPLPENVRPIDENDFQRLKEVQTPEELRDVYQFFLLYYAQEIPEMQEAMRKRK
RKEAEAENNENGENATAKEPEDLDDENQRLKHPVRKRLFDICRDMGLDGLAKKFGLTPEQ
FGENLRDNYQRHEVDQFPVEPLMAATDFVSKRFTTPEEALKAARYMVAVMIAMDPLVRRC
IRETFFERAKISISPTKKGLKEIDENHSCYSVKYLKNKPVRDLEGAQFLNMTQAENEKLL
NITISMDGSTQSNPGVYLDEIKQLYYRDEFSNNVQEWNNQRSEALSFALSKFLYPSFEKE
LKAQLLNEAQEGIIKACSRKLYNWLKVAPYQVDAQMEEDEDFDTRDGIRVFAIAYENNWE
VPAFGALIDGTGEVMEYIRLPHLLKRKNSWREKERELKELDLKVLRKFIRNKKPHVICVG
AQSREAVMVVEDIKGVVSELAENEQMPLINVELQDNDLAMVYMNSKKAENDFRDYPLLLR
QAISLARRMQDPLVEFSQLCTPDEEIFCLKYHPLQDLVPRDDLTNALNLEFVNRTNEVGV
DINLAISHIHTSFLVQFVCGLGPRKGASLLKTLKQSHQRLESRTQLVTVCHMGPKVFINC
AGFIKIDTTSFENSTNAYVEVLDGSRVHPEAYEWARKMAVDALEYDDVTEDVNPAEALEE
ILENPEKLRDLDLDAFAVELERQGYGNKSITLYDIRAELNHRYKDLRTPFRPPNPEETFN
MLTKETPQTFYIGKMVTCQVVGIARRKPHGQQLDQANPIRNDETGLWQCPFCQKNDFPEL
SEVWNHFDAGSCPGQSMGVRVRLDXSDKKVTNPEERVKVGMILHCRITKIDIERFAVDLT
CRSSDLSDVNNEWRPAKDLYYDYEAEEKDRKVDDDSKKKQNRQTYVKRVIVHPSFHNISY
KEAEKLLSTMDQGDVIIRPSSKGVDHLTVTWKVYDGILQHIDVKEQGKENAFSLGSSLMI
NNEEFEDLDEIIARHVQPMASFARDLTTFRYFRDAEGGKREVIEKLLTEEKKRNPSKIHY
FVSASREFPGKFMLSYLPRVKARHEYVTVTPEGFRYRQQMFHSVGSLFRWFKEHFRDPIP
GTPSSVTAVRTPMGQSSYIGATPSINISNVDPQAIQRAAANISNHMFASLSQVAGQTPSF
PTPYGGTYANAYPYHQQPYTPSQAMATPLVTPSYHHAVATPSVTPRYPQTPQTSWAAAQQ
TPRGAHTPRHTPAAPAAAVIQANPIPTVVSGTKSTGNPSIADWKRMAEQWAKQRMEQQDA
SNRASARRTPTTRASPSPMIESTPAGDATPLIDEQ
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcttggagagtgaggccgaggagtcggacgatgaggaggtgaccgggaaa
cgaccattagtggacgatgacgatgaggaagaagaggaggaagaagatgatgatgagagg
ttgagagaagagatgaaggatcttatcaatgatgaagaggaagaagttgaagaggactcg
gacgatgatgtaggaggcaaaaagaagcggcggcatcacgatgactttgacgacaatcta
gaagatgaagattacgatcttatagaggaaaacttgggagtcaaagtgcagaggaaaaag
aagttcaagcgtgtgaggagaatagaggacgaagaaagtgacaatgaagaaagcaaggac
agcaccaatcgtgatgccattgccaatgagctgtttgaaggatctgatgcggaggcagct
gctgagcaggatgaagaaagaggagagggagaagaggaggaaagggaaggctcgggctcc
gagcttgagtctgatcccgatgatttcattgtcgatgatgatggccagcctatcacaaaa
ggcaagaagaagaggcatatcaagtacactgaccaggccctgcaggaagctcaggacatt
ttcggtgtcgattttgactttgacgagttctccaagtaccaggatgactacgatgaggaa
atggaagaggaagagtatgaggatgaagaagaggaaggggagactcgcccacgccccaag
aagacgtcacgcaagcgccagacgaagaagagcatttttgaggtgtacgaaccagtcgag
ctggagcgaggccacttcaccgaccgggataacgaaatacggacgacagacgtgcccgaa
cggttccaactacgggcagtgccggtgacgtcggcttccgaggaagagattgcgcgtgag
gctgagtggatctacaagcatgcatttgggaaccccacaatctcggtgcagtcggctgtt
gatgaaggcgccaaggggtcctctgccgcttctgatctggcaggtcgacaccagcctcct
gcagggcgcaagagtgtgacagctgtggcaaagattgccgaggcgctgaagttcatgaga
aatcaactttttgaggttccatttattgccttctaccgaaaggagtacgtggagcctgac
ctcaacattaacgacctctggacagtctacaagtgggatgaaaagtggtgccagctgcag
cagcgtaagaagaatctgcagcagctgtttcagcgcatgcaagagttccagtgtgatcag
atactgcaggaagacccggacaagccgctgccagagaatgtacgacccattgatgaaaac
gacttccagaggctgaaagaggtgcagacgcccgaggagttgcgtgatgtttaccagttc
ttcctgctgtactacgcacaagagatacctgagatgcaggaggcgatgcgtaagcgtaag
aggaaagaggccgaagccgagaataatgaaaacggcgagaatgcaacggccaaggaaccc
gaggacctggatgatgagaatcagcggttgaagcatcctgttcggaagcgtctgtttgac
atttgtcgggacatgggactcgatggccttgcaaagaagtttggcttgacaccagagcag
tttggagagaatctccgagacaattaccagaggcacgaggtggaccagtttccggtcgaa
cccctgatggctgctactgattttgtcagcaagcgcttcacaacacccgaggaggctctg
aaagcagcacgatacatggtggcggtgatgattgctatggaccctctggtacgaaggtgc
atacgtgaaaccttcttcgagagggccaagatcagcatttcaccgacgaagaagggtctc
aaggaaatcgatgagaaccactcatgctattcagtgaagtacctgaaaaacaagcctgtt
cgagatttggaaggagcacagtttcttaacatgacgcaggctgaaaacgagaagctgctc
aatatcaccatttctatggatggaagcactcaatcaaatcctggagtttaccttgatgag
atcaagcagctctactacagggacgagttcagcaacaatgtccaggagtggaacaaccag
cgcagtgaggctctcagctttgccctgagcaaatttctctacccaagctttgagaaggag
ctcaaggcacagctgctcaacgaagcgcaggaaggcatcatcaaggcttgctcccgaaag
ttgtacaactggctgaaggtggccccgtaccaggtggacgcccaaatggaggaggatgag
gactttgacactcgtgatggcattcgggtgtttgccattgcctacgagaacaattgggag
gttcctgctttcggcgcacttatagacggcactggtgaagtgatggagtacatcaggctc
ccccacttgctcaagaggaaaaactcctggcgggagaaggagcgggaactcaaggaactt
gatctaaaggtcctcaggaagttcattcgcaacaagaaacctcatgtaatctgcgttgga
gcacaatccagagaggcagtcatggttgtagaggacatcaaaggcgtggtatctgaacta
gcagagaatgaacagatgcccctgatcaatgtggagctgcaagacaatgacctggcaatg
gtctacatgaactccaagaaggccgagaacgacttccgggactacccgctgctgctgcgg
caagccatctcattggccaggcggatgcaggatcccttggttgagttctcgcaactctgc
actccagatgaggaaattttttgcctcaagtatcaccctctacaggacttggtaccaagg
gacgatctcaccaatgcactgaacctggagttcgtcaaccggactaatgaagttggtgtg
gacatcaacttggcgatctctcacatacacacgtccttcctggtgcagttcgtgtgtggc
ctcggacctcgcaaaggtgcctcactgcttaagacactgaagcaatcccaccaacgcctc
gaaagccggacacaacttgtgacagtctgccatatgggacctaaagtgttcatcaactgt
gcgggcttcatcaagattgacacaacttcgttcgagaatagcacaaatgcctatgtggag
gtgttggatggctcgcgtgttcatccagaagcttatgagtgggctcgcaagatggctgtg
gatgccctagagtatgatgatgtcaccgaagacgtgaaccccgctgaagccctcgaggaa
attctggagaaccctgaaaagctcagggacttggatctcgatgcatttgcggtagagctt
gaacggcaaggatatggcaacaagagcatcacgctgtacgacattcgggcagaattgaat
cacaggtacaaagacctgcgcactccgttccggccccccaaccccgaagaaacattcaac
atgctcacgaaggagaccccacagaccttctacattggcaagatggtgacttgtcaggtg
gtgggcatcgcacggcggaagcctcacggacagcagctggaccaagccaaccctatccga
aatgatgagacgggcctttggcagtgccctttctgccagaaaaacgacttccctgagctg
agtgaagtgtggaatcattttgatgctggcagctgtccgggacagtctatgggtgtccgg
gtgcgcctggacntcagcgacaagaaggtcaccaaccctgaggagagagtaaaggtcggc
atgattcttcactgcagaataacgaagatagacattgaaaggttcgcggttgatctgact
tgccgatcttctgacctttctgacgtcaacaatgagtggaggcctgcaaaggacctgtac
tatgattatgaggccgaagaaaaggaccggaaagtggatgacgactctaagaagaagcag
aatcggcaaacatacgtgaagcgtgtgattgttcatccatcattccataacatctcttac
aaggaggctgagaagctgcttagcactatggatcaaggtgatgtgatcattcgtcccagc
agcaagggagttgaccacctgacagtgacatggaaggtgtatgatggcatcctgcaacac
attgatgtgaaagagcaggggaaggagaatgcgttcagtcttgggtcttcattgatgatc
aacaacgaggaatttgaggacctggatgaaataatagccaggcatgtacagccaatggca
agctttgcacgtgacttgaccacgtttcggtacttccgggacgctgaaggtggcaaacga
gaagtcattgagaagctgctcactgaggagaagaagcgtaacccttccaagatccactac
tttgtctcagcctcgcgagagttccctggaaagtttatgctctcctacctgccacgagtc
aaggcgcgccatgagtatgtgacggtgacacccgagggcttccgctaccgacagcagatg
ttccactccgtgggctctctgttcaggtggttcaaggagcacttccgggaccccatccct
ggaacgccaagcagtgtgactgcagtgcgcacaccgatgggccagtcatcctacattggt
gccacacccagcatcaacatttcgaatgtcgaccctcaggcgatccagagagcagcagcc
aacatttccaatcacatgtttgcatcattatctcaagtggccggacagacaccgtcattc
ccaacaccatatggtggaacctatgccaatgcatacccttaccaccagcagccgtataca
ccctcacaagcgatggcgacgccactcgtgaccccatcgtaccaccatgcggtagccaca
ccatcagtgacccctcgttacccacagaccccacaaacttcgtgggcggctgcccaacag
acgccacggggtgctcatacacctcggcacacgccagctgcgcccgctgcagctgtcatc
caggccaatcccatccccaccgtcgtgtctggcaccaagagcacaggcaacccatcgatt
gccgactggaagcgcatggcggagcagtgggcaaagcaacgcatggagcagcaagacgca
tcgaaccgtgcgtctgcgcgccgcactccaacaactcgcgcatccccaagccccatgatc
gagtcgacaccggctggcgatgccacaccgctcatagacgagcagtag
DBGET
integrated database retrieval system
