KEGG   Dermacentor silvarum: 119446165
Entry
119446165         CDS       T07348                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
dsv  Dermacentor silvarum
Pathway
dsv03030  DNA replication
dsv03410  Base excision repair
dsv03420  Nucleotide excision repair
dsv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119446165
   03410 Base excision repair
    119446165
   03420 Nucleotide excision repair
    119446165
   03430 Mismatch repair
    119446165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsv03032]
    119446165
   03400 DNA repair and recombination proteins [BR:dsv03400]
    119446165
DNA replication proteins [BR:dsv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    119446165
DNA repair and recombination proteins [BR:dsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     119446165
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT AAA_22 AAA_30 RCF1-5-like_lid AAA_14 RuvB_N AAA_5 nSTAND3 HrpB2 AAA_16 RNA_helicase
Other DBs
NCBI-GeneID: 119446165
NCBI-ProteinID: XP_049519911
LinkDB
Position
3:complement(180353963..180399640)
AA seq 1069 aa
MDIRKFFTSSGPAPVKRAADDTKRQPDEKSKSKQSTKAAKEPAKPKALEKKEKKTSPVKV
PKKEKHEPAKPVSAKEKKESGKKPRQRIVMLDSDSEDEEPIPKKAKKQAKECKAVTVDSD
EGSEDPVALKPAERTETAVSKDASPKKPVRKVNGKEPPSQKLVPVSADDFFTSASLSPAS
KLSLKAAQAKKVSTAKESHDDDDFQKTLDRLDEKPQEKQLATRSSPRKTIKDSERSQKSG
KPAESPIARKASPSKGNVQKPEPSQKLEKEKATVKCTPEKRKAESQGSASPLSKKPEKAL
TPKKGSSRTVLKKTEEATPGKQAVKKERSAPSKEEVPKKEKPAAATSPAFRRGNAASYQS
YLNREGPRLLGTRDIPEGAPGCLKGVTLVVTGVLECIERDDAKELLERCGAKVTQSVSRN
TTYVVAGRDSGPAKIRKAEECKVEIIDENALYELIESRSGGAGKRKAEKAEVKEEPEEAS
TPKKKRKVDSEDSSEDHQEKRVPKVSEHAISPNKKSGATAAGETPSTSSGQKTWTPSEMW
VDKYKPQTTKQIIGQQGDKSNCGKLLLWLRNWHKSRAGPKKPIPKWGGGGGDGSAFKAAL
LSGSPGIGKTTTATLAAREAGYSILEMNASDTRSKKSLVEHVAETLGNLTLTGSGMTSKH
VLIMDEVDGMAGNEDRGGVQELIGLIKSTRIPIICICNDRSHPKMRSLLNYCFDLRFQRP
QVKQIQAALMSIACKEGLSISPAIVQEIVMASNQDVRQALHNLSLWSSRAKSMSVAQVKA
DAGKGTKDIKMGPFDVVRKILSSTEGGQSMTLNEKAALFFHDYNMVPLFVQDNYLHIQPL
EAKGDPKKHLRLVSDAADSISYGDVVERQIRQHGNWSLLPMQAFFASVIPGELVRGHMRE
MVSFPAWFGKNSSTTKRHRLLRELKHHTYTRVSADRTQLSMDYVGPLLDSLTKPLIDKGA
DGVPSAVRRMHHYYLQRADLDNLCDLALWPGMGDPMGRIDSKVKAALTRSLNKEAFMMPY
ATGDFVKKKAKKGAGKAGKLAASQGDEENPEEEAEEEDDEPDPTLVDYE
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggacatccgcaagttcttcacctcttctgggccagcgcctgtgaagcgagctgctgat
gatacaaaaagacaacctgatgagaaaagcaagtccaaacagtcgacgaaagcggcgaaa
gagcctgcgaaaccgaaggccttggaaaagaaggagaagaaaacttcacctgtgaaagtt
ccgaagaaagaaaaacatgagccggccaagccagtgtccgcgaaggaaaagaaggaatct
ggaaaaaagccacggcagaggattgtcatgcttgattccgattcggaagacgaagaacca
atccccaaaaaggccaagaagcaagccaaagaatgtaaagctgtaactgttgattctgat
gaaggctcggaagacccagtggctttgaagcctgccgaacgtacggagactgcagtttca
aaggatgcatctccaaagaagcctgtaaggaaagtaaatggcaaggaacctccaagtcag
aaactagtgcccgtttctgctgatgatttcttcacaagtgcttccttgagtcccgcctcc
aagttgtcactcaaggcggctcaagcgaaaaaggtttcgactgcaaaggagtctcatgat
gacgacgatttccagaaaacacttgacaggctggatgaaaagccacaggaaaagcagctg
gccacacgttcaagcccccggaagaccatcaaagactctgagaggtcccagaaatctgga
aaaccagctgagagtcccattgcaagaaaggcatcaccgtctaaaggtaatgtccagaag
ccagaacccagccagaagcttgagaaggaaaaggccacagtgaaatgcacaccagagaaa
cgaaaagctgaatcacaaggttctgccagccctttgtccaagaagcctgagaaagcactg
acacctaaaaagggaagctcaagaacagtgctaaagaagactgaagaagcaacgcctggc
aagcaagctgtgaagaaagaacgatctgcaccttctaaggaagaggtacccaagaaagag
aagccggccgctgccacttcacctgcctttcggagaggaaatgctgctagctaccagagt
tacctcaacagggaaggcccgaggttgctgggaacacgagacataccagagggtgctcct
ggctgcctgaaaggtgtgacattagtggtgaccggagtgttggaatgcatcgagcgtgat
gatgctaaggagctgctggagcgctgcggcgccaaggtcacgcaaagtgttagccgcaat
accacctacgttgttgcgggccgagactcaggcccagccaagatacgcaaggcagaagag
tgtaaggtggaaataatagatgaaaatgctctgtacgagctgattgaaagtcgttcgggt
ggtgctggcaagcgcaaggctgaaaaagcagaagttaaggaagagccagaggaggcaagt
acaccgaagaaaaaacgaaaagtggattctgaagacagctcggaggaccatcaggaaaag
agggtgccaaaagtcagtgagcacgccatttccccgaacaagaagtcaggagctactgct
gctggggagacgccgtcgacatccagcggccagaagacatggacaccctctgagatgtgg
gtagacaagtacaagccgcaaacgaccaagcagatcatcggccagcagggagacaagagc
aactgtggcaagttgctcctgtggttgcgcaactggcacaagagccgtgctggacccaag
aaaccaattcccaaatggggaggaggtggaggcgatggttccgccttcaaagcagctctt
ctttctggatctcctggcatcggcaagactaccactgctacacttgcagcacgggaagcc
ggctacagcattttggagatgaatgcttcagacactcgttccaagaagagtcttgtcgaa
cacgtggccgagaccctggggaacctcacacttacaggatctggcatgacatccaaacac
gtgctcatcatggatgaagtcgatggcatggcaggcaatgaggacaggggtggagttcag
gagttgattggtctgataaagtccacccggattcccataatatgcatttgcaatgaccgc
tcgcacccgaaaatgcgttccttgttgaactactgttttgacttgcgattccagcgaccg
caggtcaagcaaattcaggctgcgctgatgtccatcgcatgcaaggaaggtctttctatc
agccccgccattgtacaagagattgtcatggcctccaaccaggatgtgcggcaagcactg
cacaacctctcactttggagttcccgagcaaagagcatgagtgtggcacaggtgaaggct
gatgctggcaagggtaccaaggacatcaaaatgggaccgttcgacgtggtgcgcaagatc
ctgtcgagcaccgagggtggccagtctatgacactgaacgagaaggcagcactcttcttt
catgactacaacatggtgccgctgtttgttcaagacaactacttgcacattcagcccttg
gaagccaagggtgatcctaagaagcaccttcgattggtcagcgatgcggccgacagcatc
agctatggcgacgtagtagagcgacagatccggcagcatggcaactggtccctgctcccc
atgcaagctttctttgcaagcgtgattcctggagagcttgttcggggccacatgcgagag
atggtcagctttccagcctggttcggcaagaactcctccacgaccaagcgacatcgcctg
cttcgcgaactcaagcatcacacatacactcgagtatctgctgaccgcacacaactgtcc
atggactatgtgggtcccttgctagactcgctgaccaagccgctgatcgacaaaggtgcg
gacggtgtgccaagtgctgtgcgccgcatgcaccactactacctgcagcgagccgacctg
gacaacctttgtgatctggctttgtggccgggcatgggtgaccccatgggacgcattgac
tctaaggtaaaagctgcactgacacgttccctgaataaggaggccttcatgatgccttat
gccactggcgacttcgtcaaaaagaaggccaagaaaggtgcaggcaaagctgggaaactg
gcggcatcacagggcgacgaggaaaatcctgaagaagaagcagaggaagaagacgacgag
cccgacccaacccttgttgattacgagtag

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