Dermacentor silvarum: 119446182
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Entry
119446182 CDS
T07348
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119446182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119446182
03012 Translation factors [BR:
dsv03012
]
119446182
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119446182
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119446182
Translation factors [BR:
dsv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119446182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
Sigma54_activat
AAA_23
ResIII
AAA_16
PhoH
NACHT
TsaE
AAA_29
Motif
Other DBs
NCBI-GeneID:
119446182
NCBI-ProteinID:
XP_037566471
LinkDB
All DBs
Position
3:complement(181663420..181714762)
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AA seq
950 aa
AA seq
DB search
MFSRHERRGGRGGRGSGRGSGRGSGWNRGGQSRGGRPGSSYPAGLRGKEIGLYFARRGRA
RKEWAAAHQKVAVSIDPESQQDLQQIIRSISLEEGSSHEQLNSINAVAVEYLSNAPTRFG
TGGVGKELKLERIAVLDEKLYQSLEAKSQSREYRSMLEFRKKLPAYTMREQIIEVIENNR
VVVISGETGSGKTTQVPQFILDSYIQKGMGSLCKVICTQPRRISAISVAERVAAERAERC
GDSAGYHIRLECRAPRDRGSILFCTTGILLQQLQGDPYIMGASHVILDEVHERDLQTDFL
SIILKDLLTVRPDLRVILMSATINAELFSGYFGNCPRLEIPGITFPVEVIYLEDVLEQIG
YRGNSVFSRNAGIRRRDRKEFENMRQDAMPFIRSLEGKYSNKTLDTLSEWNELCIDLDLV
HALISEICTKKPEGAILVFLPGWEQINELNKRLKADSSLRGSSLIIPLHSMMPTVNQRQV
FDRPPSGVRKIVLATNIAETSITINDVVYVIDCGKIKMSNFDVDKNLATLDAEWVSMANA
QQRKGRAGRVQPGVCYRLYTSWRESQLEAYQLPEMLRTRLETLILKIKILKLGSAEAFLQ
KAINPPSSEALHLSLQFLITLKALNEDETLTPLGYHLAKLPLDPQTGKMIIMASIFSCLD
PILTVAASLSFKDAFMVPLGKERLVDEAKKRFAGNTKSDHIMLVNVFSQWEEAVKKRDGN
EFCYANFLSWNTLKMLSNMRQQFAEYLHELNFIGSQDIKAREFNQNSDNLKVLQAVICAG
LYPNVAKGQFAKNKRLVRCSTKTDAKAALHPKSVNVSECGFDTQWFVYYTKIRSTKTFLH
DVTPVYPIPLLLFGGFFRHSGDTITLDDWITLQCDDNLAELVQDLRQEFDRILEKKIGAP
GLLAGTISANQRRLLAAIIRVLSTETAFVPEMPDNAFDEDDMDVQVIDKT
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgcggcatgagagacgtggaggaaggggagggagaggttcgggcagaggctcg
ggcagaggctcgggctggaacagaggtggacaaagcagaggtggacgccctggctcgagc
tatccggcaggtctgcgaggaaaggaaattggcctttactttgcacgcaggggccgagct
cgaaaagaatgggccgctgctcaccagaaagttgctgtatcaattgatccagaaagccag
caagacctgcagcagatcattcgcagcattagcctggaagagggctcaagccacgagcag
ctcaattcaatcaatgccgttgcagtggagtacctttcaaatgccccgacacgttttggc
acagggggcgttggtaaagaactgaagcttgagcgcattgctgtgcttgatgaaaagctt
taccaaagcctggaagccaagtcacagtcacgggaatatcgaagcatgctagaattcagg
aagaaactgcctgcctacacgatgcgagagcaaataattgaagtcattgagaacaatcgg
gttgtggtcatcagtggtgaaactggatcaggaaaaaccactcaagtaccacagttcata
ctggactcgtacattcaaaaaggcatggggtccctctgcaaggtcatctgcactcaaccg
cgccgaattagtgcaatatctgtagcagagcgggtggcagctgagcgggcggagcgatgc
ggggactcggctggctatcacatacggctggaatgcagagcacctagagaccgtggctct
atcctcttctgcaccactggaattcttttgcagcagcttcagggtgacccgtacattatg
ggagcctctcacgtgatactcgatgaggttcacgaacgcgacttgcagactgactttctc
agcatcatcctaaaagacctgctaactgtgaggcctgacctgcgcgtgatactcatgagc
gcaacgatcaatgcggaactcttctctggctactttggtaactgcccacggttagaaata
ccgggcatcacatttcctgtggaagtgatctacctcgaagatgttcttgaacaaattggg
taccgaggaaacagtgtgttttctcgcaacgctggtattcgtcgcagagacagaaaggag
tttgagaacatgcgtcaagatgccatgccgtttattcgaagcctcgaaggaaagtattca
aacaaaaccttggacactttgtcagaatggaatgagctgtgcatagacttggacttggta
catgcattgatttcagagatatgtaccaaaaaacctgaaggagcaatactagttttcctt
ccagggtgggagcaaatcaatgagctgaacaaacgtctgaaagctgattcaagtcttcga
ggttcatcgctgataattcccctgcactccatgatgccaactgtcaaccagagacaagtg
ttcgacagacctccctccggagttcgcaaaattgttcttgccaccaacattgcagaaaca
agtatcaccatcaatgatgttgtgtacgtgatcgactgtggcaagatcaagatgtccaac
ttcgatgttgacaaaaacctcgccactctggacgctgagtgggtgtcgatggcaaatgct
caacagcgcaaagggcgggcagggagagtgcagcctggtgtatgctaccggctgtacact
tcctggagagagtctcagctcgaagcctatcagctgccagagatgctccggactagactg
gaaacgctcattctcaagatcaagatactgaaactaggaagtgcagaagcttttctacaa
aaggcaataaatcctccctcctctgaggcattacatctttcccttcagttcttaattaca
ctgaaagctctgaacgaagatgagactttgactcctctgggctaccacttggccaagctg
cctttggaccctcagacgggcaagatgatcatcatggcatccatcttctcctgccttgac
cccatcctcactgtggctgcaagcttgagcttcaaggatgcctttatggtgccgctggga
aaggagagacttgtggatgaagcaaagaagcggttcgctggaaacaccaaaagtgaccac
atcatgcttgtcaatgttttttcacaatgggaagaagcggtaaagaagcgtgatggcaac
gaattctgctatgcaaactttctctcatggaacacactcaagatgttgtcaaatatgcgg
cagcagtttgccgagtacttgcacgagttgaacttcataggttcacaggacatcaaagcc
cgagagttcaaccaaaattcagataacttgaaagtcttgcaagctgtcatctgcgctggt
ctgtacccaaatgttgccaagggacagtttgccaagaataaaagacttgtgaggtgctcc
acaaagactgacgcgaaggccgcactacacccaaagtctgtgaatgtatctgaatgcggc
tttgacactcagtggtttgtgtattataccaaaattcggtctacaaagacattcctgcac
gatgtcactccagtctatcccattccacttctgctctttggaggctttttcaggcacagc
ggggacactatcacgcttgatgactggatcactcttcagtgcgatgataatcttgcagaa
ctcgtccaggacttgcggcaagagtttgatcgcattcttgaaaagaaaatcggtgcacct
gggctgctggcaggaaccatatcagccaaccagcgacggctacttgctgccatcatccga
gtcttgtcaacagagactgcttttgtgcctgagatgccagataatgcttttgatgaggat
gacatggatgttcaggttatcgataaaacgtag
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