KEGG   Dermacentor silvarum: 119446721
Entry
119446721         CDS       T07348                                 
Name
(RefSeq) replication factor C subunit 5-like
  KO
K10756  replication factor C subunit 3/5
Organism
dsv  Dermacentor silvarum
Pathway
dsv03030  DNA replication
dsv03410  Base excision repair
dsv03420  Nucleotide excision repair
dsv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119446721
   03410 Base excision repair
    119446721
   03420 Nucleotide excision repair
    119446721
   03430 Mismatch repair
    119446721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsv03032]
    119446721
   03036 Chromosome and associated proteins [BR:dsv03036]
    119446721
   03400 DNA repair and recombination proteins [BR:dsv03400]
    119446721
DNA replication proteins [BR:dsv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    119446721
  DNA Replication Termination Factors
   ELG1-RFC complex
    119446721
Chromosome and associated proteins [BR:dsv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    119446721
DNA repair and recombination proteins [BR:dsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     119446721
  Check point factors
   HRAD17(Rad24)-RFC complex
    119446721
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_24 AAA_11 AAA_22 RuvB_N AAA_assoc_2 AAA_14 DEAD AAA_16 DUF815 ResIII RCF1-5-like_lid AAA_7 AAA_5 AAA_30 AAA_19 Mg_chelatase TIP49 BrkDBD DNAX_ATPase_lid Delta_lysin Glyco_hydro_57 AAA_28
Other DBs
NCBI-GeneID: 119446721
NCBI-ProteinID: XP_037567171
LinkDB
Position
3:complement(221114152..221128517)
AA seq 325 aa
MSTATTNLPWVEKYRPQKLDDLIAHEDIISTIGRFIKEDKLPHLLFYGPPGTGKTSTILA
CAQQIYSPREFSSKVLELNASDDRGIGIVRGEILSFASTKTIFNSGFKLIVLDEADAMTN
DAQNALRRVIEKFTENARFCLICNYLSKIIPALQSRCTRFRFGPLTASQMSPRIDHVITQ
ERLTVTADGKKALMDLAQGDMRKALNILQSTSMAFDEVNETNVYLCVGHPLKEDISDIVS
TLLNEDFAFSYNHINKLKVGKGLALQDVLTQVHLYVHRVELPDKVKMYLIDKMAEIEYRL
AAGTSEKIQLSSLISAFQVARQLAT
NT seq 978 nt   +upstreamnt  +downstreamnt
atgagtactgctactacaaacttaccatgggtcgagaagtacaggcctcagaaactggac
gacttgattgcacacgaagacataattagcacaattgggaggtttataaaagaagacaag
ctaccgcacttgctattctatgggcctccggggacgggcaaaacatctaccatactggcc
tgcgcccagcagatctacagtcccagagaattcagctccaaagtacttgagctcaatgca
tcagatgacagaggaatcggtattgtccgtggggagatcttgagctttgcaagcacaaaa
acaatattcaactctggtttcaagctgattgtgcttgatgaagctgatgctatgacaaat
gatgcacaaaatgcattacgtcgagtgatagagaaatttacggaaaatgcccggttctgc
ctcatctgcaactacctctccaagatcataccagctttgcaatcacgatgcactcggttt
cgatttgggcccctcacagcttcccaaatgtcacctcgtatcgatcacgtaatcacccaa
gaaaggctgaccgtcacagctgatggcaagaaagcactcatggatctggctcagggtgac
atgaggaaagcactgaacattcttcagagcacaagtatggcctttgacgaagtgaatgag
accaatgtctatctctgcgtgggtcacccactcaaggaagacatcagtgacattgtcagc
accctgctcaatgaagacttcgctttctcctacaaccacatcaacaagctaaaagtggga
aaaggcttggctcttcaagatgtgctgacacaggttcatttgtatgtccatagagttgaa
cttccagataaagtgaagatgtacctgattgacaaaatggcagaaattgagtatcgactt
gcagctggcacaagtgaaaagattcagctaagttcgctcatctcggcatttcaggttgcc
agacagttggctacataa

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