Dermacentor silvarum: 119446749
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Entry
119446749 CDS
T07348
Name
(RefSeq) exosome component 10-like isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119446749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119446749
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119446749
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
119446749
NCBI-ProteinID:
XP_037567209
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All DBs
Position
3:222500656..222593392
Genome browser
AA seq
816 aa
AA seq
DB search
MASEEEVPTTAASSQAKFLNLYDDSNKYAEHLLRSVVQATKAANDLPGAGEDFEYFSSFA
SFRQVMLAEGKSVLKLMSSLASHQVGKGKFEGLDLEEKFDLLADINDTVLERVGNNLDEA
DGVKKKADEVVLVTVSANRPIHTSWNKKDPSRAAKFHLLAAKNVTRPQLTFREKVDNSNT
PFVPILRDKPHSLKPLALLPERTADGQECYGHPYEWEIDHFEPSPAQLQAPTEERLPPPL
EETPCTIVETVDQLKDMCTALSKETEIAVDLEHHSYRSFQGFTCLMQISSRSQDYIVDTL
ALRHELQMLNEVFANPKIIKVFHGADMDVVWLQRDFGLYLVGLFDTGQAARVLGLAHFSL
AFLLKHYCKIDADKQFQLADWRIRPLPPEMVNYAQSDTHYLLYIMDRLKQDLADRSNEND
NLLRSVFDRSKQVALKRYEKPSYHEQSYMELYRKSRKTFNSRQLHALCHLYSWRDRTARN
EDESTGYVLPNHMILEISEILPREQQGIVACCNPCPPLVRQNLNELHAIILKARDVPLNQ
SLVPEKSSWPVTVQVDLDSVLHCVHDQPRHEDASLALPTLLDEDAEPVPAEKCTSQLSTK
AMPSLGAIAAKVSHAKPRGSSLVLPYKRYKAAVERDGPEVETIHRETTTGESPEQQMSEE
KTQSEEVNEATERKQEEGEEEETPAAATAAAPYEDTDLAEPLRAPRKTRRGQRGKRKRTE
PDVGLFPDGQTYNSPNVNISSDEAVEDSSKGGIDFKPFDYTAQTPPAKEQKKQPWSYNPE
GPDDMKAGKKKRRRQQVKSRTFGSHSGEPVAKWPKR
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggaagaagaagtacctacaaccgctgcatccagccaagcgaaatttttaaac
ttgtacgatgactccaacaagtatgccgagcacctgctccgttctgttgtacaagcaaca
aaagcagctaatgacctgcctggagctggagaagattttgagtacttcagcagttttgcc
agttttcgtcaagttatgctggcagaagggaagagtgtactcaagctgatgtcttctctg
gccagtcaccaggttgggaaagggaagtttgaaggtcttgacctggaggaaaagtttgat
cttctagctgacatcaatgacactgtgctggagagagtgggaaacaaccttgacgaggca
gatggagtcaagaaaaaggcagatgaggttgtcctcgtgactgtgagtgcaaacaggcct
attcacaccagctggaacaagaaggacccttcccgggcagcaaagttccacctgctggcg
gccaagaacgtgacgcggccgcagctcacttttcgcgaaaaggtggacaacagcaacacc
ccctttgttcccatccttcgagacaagccacactctctgaagccccttgccctgttgcct
gagcgcacagctgatggacaagaatgttatggccatccttatgagtgggagatagatcac
tttgagccatcacccgcacagcttcaggcacccactgaagagaggcttcccccacctctc
gaggagacgccctgtaccattgtggagacagtcgatcaactaaaggacatgtgcacggca
ctgtcgaaggaaaccgagattgctgtggacttggagcatcattcttaccggagcttccag
ggcttcacatgcctgatgcagatctcaagtcgctcccaagactacatcgtggatacattg
gctctgcgtcatgaattgcaaatgctcaatgaagtttttgccaaccccaagatcatcaag
gtctttcacggtgcagacatggacgtggtgtggctgcagcgtgactttggcctgtacctg
gtggggctgttcgatacaggccaggcagccagggtgcttggcctggcccatttctctctg
gccttcctgctcaagcattattgtaagatagacgctgacaagcagttccaacttgctgac
tggcgcataaggcccctgccaccggaaatggttaattatgcacagtcagacactcactac
ttattgtatatcatggatcgccttaaacaagacctggctgatcgcagcaatgaaaatgac
aacctgcttcggtctgtgtttgaccgcagcaagcaggtggctcttaagcgttacgaaaag
cccagctaccacgagcagagctacatggagctgtaccgcaagagccgcaagacattcaac
agtcgacagctgcatgccttgtgccacctgtacagttggagggaccgaactgctcgcaac
gaggatgagagcacgggatatgtgctgcccaaccacatgatcctggagatatcggagatc
ctgccaagggagcagcagggcattgtggcctgctgcaatccatgccctcctcttgtgcgg
cagaacctcaacgagttgcacgctatcatcctgaaagctcgagacgtgccactcaaccag
agcctggtgccagaaaagtcatcctggccagtgactgtacaagtcgacttggatagcgtg
cttcactgcgtccatgatcagccccgacatgaagatgccagtttggctcttcccactctt
ttagatgaagatgctgagcctgtgcctgcagaaaagtgcacttcacagctgtcgaccaaa
gcaatgccaagtttgggggcaatagcagccaaggtttcacatgcaaaaccaaggggcagt
agccttgtcttaccatacaaacgatataaggctgccgtggaacgagatggtcctgaagtt
gagaccatccatagggagacgacaaccggggaatcacctgagcaacaaatgagtgaggag
aagacccagtctgaagaggttaatgaagccacagagagaaagcaggaggagggagaagaa
gaagaaactcctgcagcagccacggcagcagccccatacgaagacacagacctggctgag
ccgctgcgtgcaccacggaagacacgacgtggacagcgtggcaagaggaaaaggactgag
cccgatgtgggactgtttcctgatggccaaacgtacaactcacctaatgtcaacatttca
tctgacgaggcagttgaggacagcagcaaaggaggaatcgattttaagccctttgattac
acagcacaaacacctccagctaaagagcagaaaaaacagccttggagctacaaccccgag
gggcctgatgacatgaaggctggaaaaaagaagcgaagaagacagcaggtcaagagccgc
acatttggaagccacagcggcgagcctgttgccaaatggcccaagcgatga
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