Dermacentor silvarum: 119448782
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Entry
119448782 CDS
T07348
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dsv
Dermacentor silvarum
Pathway
dsv03022
Basal transcription factors
dsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119448782
09124 Replication and repair
03420 Nucleotide excision repair
119448782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119448782
03400 DNA repair and recombination proteins [BR:
dsv03400
]
119448782
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119448782
DNA repair and recombination proteins [BR:
dsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119448782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
119448782
NCBI-ProteinID:
XP_049521830
LinkDB
All DBs
Position
4:99531807..99625123
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AA seq
534 aa
AA seq
DB search
MGTSSEDVLLMVSNVRYKKNNGTLYLMAERIAWMLEGKDSFSVSHKYADIKMQKISPEGK
AKVQLQVVLHGAEGSATTFHFVNPLGTQAQLEDRNSVKELLQQLLPKFKRTLNSDLEEKN
RILQEDPRLFELYRNLVVSRVITPEEFWANHAPKKAGSVQVAPSSQPVGVSAAFLVDVQP
QTDGTEGLKYNLTADIIDSIFRTYPAVKRKHLENVPERMTESEFWTRFFQSHYFHRDRLH
TGTRDLFSDCARSDEKDIQEAIAKGFRDPFVDISSFQDIESFNERDLPGSVTYAGSVANH
SMIRRFNHHSMMVLRACGDDKDAPVEPSQEENPVAVKHAKVWEKTQLDDLVGNSGTGSGL
PVRLGQGERHQRGPTTGDSSATPEAHVAPSVLQRELSQWNPSGQGILPASAALSVLGELS
PGGALMKNAQQVPLKDTVSMDVQQDLRSIYTAQFELLRHFWTCFPSTSAQLEEKAINMRS
TLERFQYAQLQPFRDKLLREHHAPDLAGHLDDLLQAAYTKFSSWQSRRLSLGRR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggcacatcttcggaagacgttcttctgatggtaagtaatgtgcgctacaagaagaac
aacgggaccctctacttgatggcagagcgcattgcctggatgttggagggcaaggattcc
ttttccgtgagccacaagtatgccgacatcaaaatgcaaaagatatcgccagagggcaag
gctaaagtgcagctccaagtggttcttcatggcgccgagggttctgcgaccaccttccat
tttgtcaaccctctaggcacccaggctcaattggaagacaggaacagcgtgaaggagctg
ctacagcaactgctgccaaagtttaaaaggactttgaattctgaccttgaagaaaaaaac
aggatccttcaggaagacccacgcctgttcgagctgtacaggaacttggttgtcagccgg
gtgatcacaccagaggagttttgggccaaccacgctccaaaaaaggctgggagcgttcag
gtggccccttcgtcacaacccgttggagtctcagctgcgtttctcgttgacgtccagcca
cagacagatggcacagagggcctgaagtacaacctcacagctgacatcatcgactccata
tttaggacctaccctgccgtgaagcggaaacacctggaaaatgtgcccgagcgcatgact
gaatctgaattctggacgcggttcttccagtcccattactttcaccgagacaggctccac
acaggcacgcgagacctgttttctgactgtgctcgcagtgacgaaaaagatatacaggag
gctattgcaaaaggattccgcgatccatttgtcgacatctcatctttccaagacatcgaa
tcatttaatgaacgagacctgccagggtcggtgacatatgcagggagtgtagcgaatcac
tctatgattcgtagatttaaccatcactccatgatggttctacgtgcctgtggtgatgac
aaagatgcccctgtggaaccttcccaagaagaaaaccctgttgctgtcaagcatgcaaaa
gtgtgggaaaagacgcagctggatgacctggttggcaacagtgggactggcagtgggttg
cccgtgcggctgggccagggagagcggcaccaacgaggacccacgacaggtgacagttcg
gcgacacctgaggctcacgtggcacctagcgtcctgcaacgggagctctcacagtggaac
ccctctggccaagggatactgcctgcttcagctgccctctctgtccttggtgaactatct
cctggtggcgccctgatgaagaatgcacaacaggtgcctctcaaagatacagtgagcatg
gacgtgcagcaagaccttcgcagcatctacacggcccagtttgagcttctgcggcacttc
tggacatgctttcccagcaccagtgcacagcttgaagaaaaggcaattaatatgaggtct
acgctggaacgcttccaatatgcgcaacttcagcctttccgagacaagctgcttcgtgag
catcacgctcctgatttggcgggccacttggacgaccttctgcaggcggcctacacgaaa
tttagcagctggcagtctcgtcgtttgtcgctagggcgaagatga
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