Dermacentor silvarum: 119449410
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Entry
119449410 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dsv
Dermacentor silvarum
Pathway
dsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119449410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119449410
03036 Chromosome and associated proteins [BR:
dsv03036
]
119449410
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119449410
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119449410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
DUF5023
Motif
Other DBs
NCBI-GeneID:
119449410
NCBI-ProteinID:
XP_037568508
LinkDB
All DBs
Position
4:9281478..9467667
Genome browser
AA seq
1891 aa
AA seq
DB search
MFGNQNPFGTTTGFGTGSTFGSTQPTPFGQTGSAFGTSAFGATSAPSTSGGGLFGSTTQQ
TGSLFGSTGSTFGQPSASATPGFGFGAPATSTSMFGAMNQQPAASTGIFGTPSSSFGQPR
PQFGTSFSTTTPATGTSLFGQPQSTGLFGQTAAAGSSLFGSTAFGTGSVTTGTTIKFKPP
TGTDTMMKNGVSSTISTSHQCITCMKEYENKSLEELRLEDYAANRKGGGQAGMVGFGATS
QASSIFSTPATQQSAFNFGATQNKPLFGTTATGGFAPTGGSLFGQTTTQSQNVFGKPTGF
GMTTPASTSAFGTTTGFGTTGTSVFGQPQQKSLFGQPTGTGLFGSTTATTQPSTGFGTTG
FGTTFGATTQPSAFGVRPAFGTATTSTPSTFGFGSTANTGTSLFGAKQPAFTFGSNTPAF
GATNTTGFGGFSATGTSTGGLFGAAKTTPSFGTTTTPAFGSTGFGTTPAFGTTGTLGTPA
TGGLFGASTAAKPTGFNFGGTTTTTPFAGFGQTGLGAGTTFGSAAPTMGSTDPNAAANQL
QQQQTQQLLQYLSANPYGDNPLFRNVLKETNKREELLKPTNPAAQQALLASHYKVSPMPA
PKLRPKPVGTQTGKTSSLFEGLEDEEDSIEPFSPRQSVKTLIIKPKDTPDKLSASTLLAS
PVLAANRASTPISQSSTSPSSRTPLAVPINDSGRVGSDSPRNQPSFTTPAAQVEKPVSNL
QSLDDTVSSLEVRGRKLRYLSSSDCLDDSSQADPAPDPAKPPHPAGIVLTRPGYFTMPSM
DELASMVGPDGHCIVENFCVAREGYGNVYFPGRTDVAGLNLDDIVHFRRMEITVYPDDDD
KPAVGEGLNRKAQVTLDKVWPINKTTREPIMDPEKLKALNYQEKLERTTARIGGRFLEYR
PETGSWVFEVKHFSKYGLDESDNEVDEVAVQTATSAKLPQQAAATKPADGAADKVTQKPP
SAAGVPSAYTACQESDTATGYGSDDDEMEDMEPSSAGTADRLSSDDTFSPGTGANYKPVT
QQLAEALGVSAEAVQSMKASFFAQDREDDDEEDHELACTHPRLKRALVSSGSYQSPQAFH
MDEARSPSTPTHSRASRSRSAAVYPQPNVSQAFSEFLPSHVLFGATPLPGDFVGTRQPTA
GVARASQAHGDHRLVTSAFSSPGYLPAAEQAAPLRSHPLAEPMVIPVDVEPVPLAQSLFY
EYQHMLADAACVAGYRARCGWGPQWTLTHVGKAFNGTLDEEPMEPAGHLGIFAGQRYPKP
SAAFAVSVERVAVDLDTLRPDDIQKKNVAAMLEVQLTHSCHSLEEGSPIFAPNPGVDCLH
DQDALITRLLTEMGPGHADSAMMRQFHTILGLCIALWGRAPGCNPESDDVTRYSYAKCRK
EALSDWLVDTTKAVIEAEITDLQRKEDSELLVILSYLSGRDVSKACAVAQRSRDFRLGLL
LSQGGSNPICRLMLQKQLDHWKKFKHDRYINPERIRVYALLAGLMVWPTSDPNETINCCA
DLDWKRALALHLWYYCPPTGSISDAVATYEAAFESDQPLRPYARPPYPPCHEDDGSDESY
VLDPEAPLDTCYLLLKLYCDQSQRLDRLLAPVSSVPSQLDFRISWLLHKLLQAFGFSHLS
VTAAETLHTSFAAQLESWGLWPWATFALLHLEGAAGRRKAVTELLMRHASGSRSDSHPDT
GLTGDETFVCDKLAVPPAWVYQAKAIRASAEGNFKDRAFFLLKGKIWDEAHETIVHHLAT
EAVIDDKLGELAELLRPLAEHSSQIQNWSTGGKVFHDFLRVCDTMKKATQGDLGTYDLEA
IRPAVLSLCGSISSLVCKTPRDRLCQAEIAKKTAMVLQLITSADSGAPDSAMHAACRNIE
LLSMPEDYSIEDFELLARTCTENAILCDVTS
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaaccagaatccgttcgggactaccacaggattcgggacggggagtaccttt
gggtctacacagccaacgccatttgggcaaaccggcagtgcttttgggacctcggccttt
ggtgccacatcagcgcccagcactagtggtggtggcctctttgggagcacaactcaacag
actgggagcctgtttggcagcacaggctctacttttggccaaccttctgcatcagccaca
cctggctttggttttggagcacctgcaactagcacgtccatgtttggagccatgaaccag
cagcctgctgccagtacgggaatttttggcaccccgtcatcctccttcgggcagccccgt
ccgcagtttggcacctccttctcaaccaccactcctgccaccggcactagcctcttcggc
cagcctcagagcacaggcctgtttggccagacagccgcggctggaagctctctttttgga
tcaacagcatttggcacgggctctgttactacagggaccacaatcaagttcaagccacca
acaggcactgacacaatgatgaagaatggcgtctcgagcaccatcagcacatctcatcag
tgcatcacctgcatgaaggaatatgagaacaagagtttagaggagcttcggctagaagac
tacgcagccaaccggaaaggtggcggccaggcgggcatggtagggttcggggcgaccagc
caggcaagctctatcttcagcaccccagccactcaacagtcggctttcaactttggagcc
acccagaacaagccgctgtttggaactaccgctaccggtggttttgcacccactggcggc
tcactcttcgggcagacaacaacgcagagtcaaaatgtgtttggtaagccaactgggttt
ggcatgacaaccccggcttcgacgtcagcatttggaaccaccactggatttggcaccact
ggaacctctgtgtttggtcagccacagcaaaagtctctatttggccaaccaaccggaaca
ggtctctttggaagcacaacggcgacaacacagccgtccactggatttggcaccactggt
tttggtaccacatttggtgctacaacgcagccaagtgcttttggggtgcggccagcattt
ggtacagccaccacatctacgccttccacctttgggtttggcagtacagccaataccgga
acatcgctgtttggggctaagcagccagcttttacctttgggtcgaatacaccagccttt
ggtgccaccaacacaacaggcttcggaggcttctctgcgacaggcacttcgacgggtggc
ctctttggtgcggccaagacgacgccatctttcggaaccaccaccactcctgcgtttggc
agcacaggctttggcaccacccccgcttttggcacaacaggtacccttggcactcctgcc
actggaggactgtttggtgcaagcactgcggcaaagcctactggcttcaactttggaggc
acaactactaccacaccttttgcaggctttgggcaaactggtctcggtgctggtactact
tttggcagtgctgcaccaaccatgggaagcacggatcctaatgcagcagcaaatcagcta
cagcagcagcagacacagcagctactccagtacctgtccgccaacccgtatggagacaac
ccgctcttcaggaatgtgctgaaggagaccaacaaacgagaagagctgctaaagcccacc
aacccagcagcccagcaggctctgcttgcctctcactacaaggtgtctcctatgccagca
cctaagttacggccaaaaccggttggaacacagacgggcaagacatcatcactttttgaa
gggttggaagatgaagaagacagcattgagccgttctctccacgccagagtgtcaagacg
ctgatcatcaaacccaaggacactccagacaagcttagtgccagcactctcttagcttcc
ccggtacttgcagcgaaccgtgcatccacacctatttctcagtcatccactagcccgtct
tctaggacaccactggctgttcccatcaacgacagtggtcgtgttggcagtgactcccct
cgcaaccagcctagcttcacaacaccagctgcgcaggtggaaaaacctgtgagcaacctg
caaagtttggatgacacagtgtcatcccttgaggtccgtggccgcaagttgcgctacctg
tccagctcggactgtttggatgactcgtctcaagctgatccggcacccgaccctgcaaaa
cccccacaccctgcaggcattgtgctcactcgaccagggtacttcaccatgccttctatg
gacgagctagcatctatggtgggccctgatgggcactgcatcgtggagaatttttgtgtg
gctcgtgagggctatggcaatgtctactttccaggccgtaccgatgttgcgggtctcaac
cttgatgatattgtgcactttcgtcgtatggaaattactgtgtaccctgatgacgatgac
aagcctgctgtaggcgaaggcctcaaccgcaaagcacaggttactcttgacaaagtatgg
ccaatcaacaagaccactcgtgagccaatcatggacccagaaaagctgaaggcacttaat
tatcaagagaaactggagaggaccactgcaagaattggaggtcgttttctggaatacaga
ccagaaactgggtcttgggtttttgaggtgaaacacttttccaaatatggtttggacgaa
tctgacaatgaagtggacgaggttgctgtccagacagctacatcagccaagttgccacag
caggcagcagccacaaaacctgctgatggcgctgcagacaaagtcactcagaagcctccc
tcagctgctggagtcccttctgcttacactgcctgccaggaatctgacacggcaactgga
tatggttctgatgatgacgagatggaggacatggagccatcgtctgctggaacagcagac
aggctcagcagtgatgacacgttctcgcctgggactggtgccaactacaagccggtgact
cagcagctagcagaagcactgggagtgagcgcagaggcagtacaaagcatgaaggcctct
ttttttgcccaggacagggaggatgatgacgaagaggatcatgagctggcctgcactcat
ccacgcttaaagagagctctggtgagcagtggctcataccagagcccacaggcctttcac
atggatgaagccaggtcgccgtccacacccacacattccagagcatcccgctcccgctct
gctgctgtttatccgcaacccaatgtgagccaggccttctccgagttccttccttctcat
gtcctgtttggtgcgactccattgccgggagactttgttggcacaaggcagcccactgca
ggggttgccagagcatcgcaagcccacggtgaccatcgtctggtgacctcagcattcagc
agtcctggttacttgccagctgctgagcaggcagcgccacttcggagccaccctcttgca
gagcccatggtgattcccgtcgatgtggaacctgtacccttggctcagtccctgttctat
gagtatcaacacatgctggcagacgctgcctgcgtggccggctaccgtgctcgctgtggc
tggggaccacaatggacactgactcacgtgggcaaggcattcaatggcactcttgatgaa
gaacctatggagcctgctggccacctcggcatttttgcaggacagcgctatccaaagcca
tcagccgcatttgcagtctcggtggaaagagtggctgttgacttggacacattaagacca
gacgacattcagaagaagaatgtggcagccatgttggaagtccagctgacgcattcgtgc
cattcactggaagaaggcagccccatctttgcacccaatccaggcgtggactgcttgcat
gatcaggatgccttgattacgagactcctgactgaaatgggtcctggtcatgctgactct
gcaatgatgcggcagtttcacactattctgggtctctgcattgccctgtggggtcgtgct
cctggctgcaaccctgagagtgatgatgtcaccagatactcttacgcgaagtgtcgcaag
gaggcactctcagactggctcgtggatacaacaaaagctgtcattgaggctgaaataaca
gaccttcagagaaaggaggacagtgaactgctggtgatactgagctatctgagcgggcgg
gatgtatccaaggcatgtgcggtggcccagcggtcacgagacttccgcttgggtctgcta
ctgtctcaaggtggctccaacccaatctgccgactgatgctgcagaaacagctggaccac
tggaaaaagttcaagcatgaccgatatatcaatccggaacgaatccgggtgtatgcctta
ctggctggattgatggtttggccaacttcagacccaaatgagacaatcaactgctgtgct
gacctcgactggaaaagagctctggcactgcatctgtggtattattgccctccaactggc
agcatcagtgacgctgtggctacttatgaggctgcttttgagagtgaccaaccactacgg
ccctatgcgcggcccccatacccgccttgtcatgaagacgatggaagtgatgagtcctat
gtgttggacccagaggcacctttggacacgtgctatctgctgctcaagctgtactgtgat
cagtcccagaggttggatcggctgttggcgccggtgtcctctgtgccttcccaactggac
ttcaggatcagctggctgctgcacaagctgttgcaagcctttggctttagtcacctgtct
gtaactgcggctgagaccctgcacacaagctttgcggcccagctcgagtcatggggcctg
tggccctgggcaacatttgccctcctgcacctggagggtgctgcaggtcgccgcaaagct
gtcactgagcttctcatgcggcatgcctcggggtcacgcagtgactcccaccctgacact
ggtctcactggagacgagacctttgtctgcgacaaactggctgtgccacctgcttgggtc
taccaggccaaggcaattcgtgctagtgctgaagggaacttcaaggacagagcattcttt
cttctcaagggcaagatttgggatgaagctcatgagaccattgtccatcaccttgcaaca
gaagctgtcattgatgataaacttggtgagcttgcagagcttttgcgaccccttgctgaa
cacagtagccagatccagaactggagcacgggtggcaaagtttttcatgacttccttaga
gtgtgtgacaccatgaagaaagccacacagggtgaccttggaacatacgaccttgaagca
atccggccagcagtgctttctctctgtggctccatttccagcctcgtgtgcaaaacacca
agagacaggctttgccaggcagagatagcaaagaagacggcgatggttcttcagctcatt
accagtgctgacagtggtgcaccagacagcgcaatgcacgcagcgtgtcgcaacattgaa
ctgctctccatgccagaggactactcgatcgaggattttgaactgcttgcccgcacatgt
acagaaaatgcaatcctctgtgatgtcaccagctga
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