Dermacentor silvarum: 119450216
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Entry
119450216 CDS
T07348
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
dsv
Dermacentor silvarum
Pathway
dsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119450216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119450216
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119450216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
CR6_interact
Nucleoporin_FG
zf-C2HE
Spectrin
Motif
Other DBs
NCBI-GeneID:
119450216
NCBI-ProteinID:
XP_049521678
LinkDB
All DBs
Position
4:72829819..72853458
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AA seq
658 aa
AA seq
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MSSFAFGAAAKPTGFGFTGFGTTTTTTAPTFGTATPGVGFGTTPATSTPAATGFGMTFGQ
PANTAASGTGFTFGQPAASTGTGFAFGQPGATFGQPAAATTTSGFSFGQPAAAPTAATSF
GFGQPAATTTTGFTFGQPTAATTTTGFTFGQPTAATTNTGFSFGQPAAAGTGFGFGAQTT
AAAPTFNFGGTLGTTTAAPTFSFGAASTTAGSTGFSFGGFGANTTTTQSNPFGGTSLFST
GFGTSAAPSFGAVGPSAAAAAAAAAPSASNITNLATALSLPTVFNDERDTILAKWNQLQA
FWGTGKGYFSATAPPVVFTTENPFCRFKAIGYSRLPQAKPQDGLLALLFEKKLEEVQPLQ
AQLVEGLQRALGNKPNVAVCVEGLKSLDVNRCELVVYVMERAQTGQTRRFPSNEVVSYLE
QATVKPQLTNMGVHSTISKAAASKDWLQHYLANPPCGIDPLLWEQAKLDNPDPERLIPVP
MIGFAELRRRFKLQEHEIKQHQCRLDAIAEDISKLQIHHTNTAAKIEEHKRKQQNLYHRI
LKVMVHHEVSRKMGFAIQPEEEHLRTMLESNLAELSAPTQFRGRLNELMSQIKLQNNQMT
FTDTTIHCSLDPNSMSQLKEHLNSQQKGIFELVKIIKNDLEELKNIESSLQVAGGPRR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtttcgcttttggcgccgctgcgaaaccaacgggattcggctttacaggattt
ggcacgactaccacgacgaccgcaccaacgtttggaaccgctacacctggtgtcggcttt
ggtacgacgccagcaacgagcacacctgcagcaactgggttcggcatgacgtttggacag
cctgcgaacacagccgcctctgggacagggttcacatttggccagccagcagcgtccact
ggcacgggttttgcgttcggccagccgggcgcgacgtttggtcagccggcggctgccaca
acaacttccggattctcgtttggccagccagcggcagctcctactgcggccaccagcttt
gggtttggtcagccggcggccacgacaaccactggatttacgttcggtcagccaactgca
gccacgacgaccaccgggttcacgtttggccagccaactgccgccacgaccaacactggc
tttagctttggccagccagcagcagctggcactgggtttggatttggcgcgcaaacgacc
gcagcagcgccaacatttaatttcggcggtaccctaggaaccactacggctgcaccaaca
ttttcgtttggagctgcttcaacaacagctggtagcactggcttttcgtttggaggattc
ggtgccaacacaaccacaacacaaagcaacccatttggaggcacttcactattctcaact
ggctttggaaccagtgcagccccatcatttggtgctgtcggcccctcagcagcggctgcg
gcggcagcagccgcgccttctgccagcaacatcaccaacctggcgacggcactatctctg
cccacagtgttcaatgacgagagggacaccattttggccaagtggaatcagctgcaggca
ttctggggcaccggcaagggctacttctcggccacggcacctcctgtggtgttcaccact
gagaaccccttctgtcgattcaaggccatcggctatagccgcttgccccaagccaagcca
caggacggcctactagcactgctgtttgagaagaagctggaagaggtgcaacccttgcag
gcgcagctggttgaggggcttcagcgtgcgctgggcaacaaaccgaacgtggctgtctgt
gttgaaggtctcaagagccttgatgtcaataggtgcgagctggtcgtgtacgtaatggaa
cgtgctcaaacaggacagacgcgacggtttccatccaatgaagtggtgtcatacctggaa
caagcaactgtgaagccccagttgactaatatgggcgtgcactcaaccatttccaaggca
gccgcatccaaggactggctgcagcactaccttgcgaacccgccctgtggcatagatccg
ttgctgtgggagcaggctaagctggacaacccagacccagagcgactcatcccagtgcct
atgatcggatttgcagagcttcggcgtcgtttcaaacttcaggagcatgagatcaagcaa
catcagtgtcgactagatgcaattgccgaggatatctcgaagctccaaattcaccacacg
aatactgcagcaaaaattgaagaacacaagaggaagcagcagaacttgtaccataggata
ctgaaggtcatggttcaccatgaggtcagccgcaagatgggctttgcgatacagcctgaa
gaggagcatctgcggacgatgctggagtccaacctggctgaactgagtgcgccgacacaa
ttcagggggcgcctaaacgagctgatgtcacagatcaagctgcagaataaccagatgaca
ttcactgacacgacaatacactgcagcctcgacccgaattccatgagccagctcaaagag
cacctgaacagccagcagaagggcatctttgagttggtgaagattattaagaacgatctt
gaagaattgaagaacattgaaagcagtctccaagtggcaggtggcccaagaagatag
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