KEGG   Dermacentor silvarum: 119451027
Entry
119451027         CDS       T07348                                 
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
dsv  Dermacentor silvarum
Pathway
dsv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    119451027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsv03400]
    119451027
DNA repair and recombination proteins [BR:dsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     119451027
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP PilJ
Other DBs
NCBI-GeneID: 119451027
NCBI-ProteinID: XP_037570387
LinkDB
Position
4:227965013..228348926
AA seq 1187 aa
MAKNTLLAYFSKKPSPPVVSSGTSVNGGDKSSSLEASKVDAGVSCPYRLHDLVWAKLEGY
PYWPAMVSAPPGEGAFVKKHATQPSVHVQFFDSSPSRAWVKLRLTKPFTGVGDPAAHSSD
PRWTRGVSEAEKALALDPGDRVALLPVTDGSAAGNSTDEEDEQPSPKRRRLISDSSSEDE
FQPGKNEDGSDSDSASSGVDENTISDLEPESPEKSPPSKRPASKSPAVRKLASPKAKPAA
MVVATSGTWAHLSYDFLKEGKRRDAAGRLATHPDFNPHTLHVPESVKEKLTPAMRQWWEM
KAKHFDVILFFKVGKFYELYHMDAVTGVEELGLVFMKGDFAHSGFPEIAYGRYSEALIQK
GYKVARVEQTETPQMMEERCRKMHRPSKFDRVVRREICRITCRATRTFGPQDGQLCNPEP
AYLLAIVHSQASTSMDFGICFVDTSVGKFHLGQFRDDHFCSKLRTAVSHHPPVHVLYESD
PMLPTGLRQVLEGPLHAVSRQALRPGKELWDVPLTLRHLREGAYFGKEYPSALQSFLDPG
DPTYLTPQEDGCLALKALGACIWYLSESLIEEEVLTMRSFEKYVPPQANQATPDLNSLIL
DGVSLQNLEVLRNPSGGTEGTLLSTMDFCCTPFGKRLFQQWLCSPPCQVDVIEDRQRAVD
DLLRFPHEVQQTRELLRSLPDLERLLARIHSQGLARKSSSHPDQRAILYEDTAYNKRKIA
NLLQALQGFQKATQVAPLWVDVLPSLTSQVLTMCLSVGSEAGQFPDLADSLKFFENAFDH
EQARKEGRVTPMAGVDDDYDQAMQSIKEANKALQDYLGQQSRHFHCKASFVGSGKNRFQI
EVPESCARLADSSYQLQGQRKGFRRYYTEEVKRLVADLVSAEEAQETAVKDIMRRIFEHF
DRRRTQWEAAIHCLALLDGLLSLAHYSGSLTDASCTPRFLPCQAQPFLLVKAGRHPCLLE
HLGAAALIPNDLSLGGGKAPVLSLLTGPNMGGKSTLMRQAGLLVIIAHMGARVPADACEL
TPVDRIFTRLGASDRITSGESTFFVEVNETSAILRHASQHSLVLLDELGRGTSTHDGMAL
AHAVVQELASAICCCTLFSTHYHHLVEGFRLHPAVQLAHMACMVEDENAEDPTQETIVFL
YKCVPGPCPKSYGFNAAKLAGIPQQVIRRAFEKSHRLQERVQVACVC
NT seq 3564 nt   +upstreamnt  +downstreamnt
atggcgaagaacacactgttagcgtatttcagcaagaaaccgagcccgccagtggtgagc
agtgggacttcagtgaatggcggagacaaaagttcgtcgctggaagcatctaaagttgat
gcaggggtgtcgtgtccttaccgtcttcacgacctggtttgggccaagctggaaggctac
ccctactggccagccatggtgtcggcacctcctggagagggtgcctttgtcaagaaacat
gccacgcaaccatcggtgcatgtccaattctttgactcatccccatctcgagcatgggtc
aagctcaggctaactaagccattcacgggagtgggggacccagctgcccattcttccgat
ccccgctggacccgtggtgtgtcagaggcagagaaggctctcgccctggaccccggtgac
cgtgtggccctgctccctgtgactgatggctcagctgcaggcaacagcactgatgaagag
gatgaacagccgtccccgaagaggcggcgcctgatctcggacagcagctctgaggatgag
ttccagccgggtaaaaatgaggatggaagcgattcagactcggccagcagtggcgtggac
gagaacactatctcggacctcgaacccgagtcacctgaaaagagcccgccgagcaagcgt
ccagcctccaagtcgcctgcagtccggaagctggcatcacccaaggccaagcctgctgcc
atggtggtggcaactagcgggacgtgggcacacctctcgtacgacttcctcaaggagggc
aagcgcagggatgctgctggtcgcctggctacccacccggatttcaatccacacacgttg
catgtcccagaaagtgtcaaggagaagctgactccggccatgcgtcagtggtgggagatg
aaggcaaaacattttgatgtgatcctcttcttcaaggtgggcaagttctacgaactgtac
cacatggatgcagtcactggagtggaagaacttggcttggtctttatgaagggtgatttt
gcgcactctggcttccctgaaattgcgtacggccgatactcggaggccctcatccagaag
ggctacaaagtggcacgggtggagcagaccgagaccccccaaatgatggaggaacggtgt
cgcaagatgcaccgtcccagcaagtttgaccgggtggttcggcgtgagatctgccgcatc
acgtgtcgggcgacgcggacctttggacctcaggatggccagctgtgtaaccctgagcca
gcctacctgcttgctattgtgcactcccaggcatcaaccagcatggacttcggcatatgc
tttgttgacacctccgtaggcaagtttcatcttggccagttcagggacgaccacttctgc
tccaagctacgtacagctgtgtcccaccatccacctgttcatgtgctgtacgagagtgac
ccaatgctgcccactggactccgtcaagtgctcgagggtcctctgcacgcagtctcccgg
caggcgctgcggcctggtaaggagctttgggatgtgccgctgacgctgcgccatcttcgt
gagggtgcctactttggcaaggagtatccaagtgccttgcagtccttcctggacccaggg
gaccccacatacctgactccgcaagaggacggctgtcttgctctgaaggcattgggtgcc
tgcatttggtatctgtccgagtctctgatcgaggaagaggttctgacaatgcgcagcttc
gagaagtatgtgccacctcaggccaatcaagccacaccagacctcaacagcttgatcctg
gatggtgtgagcctacaaaatctggaggtgctgcgaaatccatctggtggcacagaggga
accctgctttcaaccatggacttctgctgcaccccatttggcaagcggctgttccagcag
tggctgtgctcccctccatgccaagtggacgtgattgaggaccggcagcgggcagtcgac
gacctgctgcgcttccctcatgaggttcagcagacgcgtgagctgctgcgctcattgcca
gacctcgagaggctgctcgccaggattcacagccagggtttggcacgcaagagttcttcc
cacccggaccagcgcgccatcctgtacgaggacacagcatacaacaagcgcaagattgcc
aatctgctccaggcgctgcaagggttccaaaaggccacacaggtggcaccactctgggtg
gatgtgctaccatcgctgacgtcgcaagtgctgacaatgtgcctctctgtcggcagtgag
gcaggccagttccctgacttggcagactcgctcaagttttttgagaatgcttttgaccat
gagcaagcacggaaggagggccgcgtgacacctatggctggcgtggatgacgactatgat
caggccatgcagagcatcaaggaggccaacaaggccctgcaggactacctgggccaacaa
agccgccacttccactgcaaggcctcctttgtgggctcaggcaagaaccgcttccagatc
gaggtgcccgagtcctgtgcccggcttgctgactcttcctaccagctacagggacagcgc
aagggcttcagacggtactacactgaggaggtgaagcggcttgtggcagacctagtctct
gctgaggaggcccaggagacagccgtcaaggacatcatgcgccgcatctttgaacacttt
gaccgcaggcgaacccaatgggaggcagccatccactgcctggccctgctggatggcctc
ctgtcgctggcacactacagtggctcgctcactgatgcctcttgcacaccacgctttctg
ccatgccaggcacagccgttcctgctggtcaaggcgggacgccatccttgcctgctcgag
cacctgggcgcggccgccctcatccccaatgatttgtccttgggaggaggcaaggctcct
gtgctgagcctcctcacgggaccaaacatgggcggcaagtccactctcatgcgccaagct
ggcctgcttgtgatcatcgcccacatgggagctcgtgtgccagcagatgcctgtgaactc
acccctgttgaccgcatcttcactcggttgggagcaagtgacagaatcacttctggggag
agcaccttctttgtggaagtgaacgagacttcggcgatcttgcggcatgccagccaacac
tccctggtgttactcgacgaactaggccggggcacctccacgcacgatggcatggccttg
gcgcatgccgtggtccaggagctggcatcggccatctgctgttgcacgctgttctccacc
cactaccaccacctggtggagggcttccggctccacccggctgtgcagctagcacacatg
gcatgcatggtggaagacgaaaatgcagaggaccccacgcaggaaaccattgtgttcctc
tacaagtgtgtgccaggcccctgccccaagagctacggcttcaatgctgccaagttggca
ggcattccacagcaggttatcagaagagccttcgagaaatcccatcgtcttcaagagcgt
gttcaggtggcttgtgtttgctga

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