Dermacentor silvarum: 119451027
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Entry
119451027 CDS
T07348
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dsv
Dermacentor silvarum
Pathway
dsv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119451027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsv03400
]
119451027
DNA repair and recombination proteins [BR:
dsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119451027
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
PilJ
Motif
Other DBs
NCBI-GeneID:
119451027
NCBI-ProteinID:
XP_037570387
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Position
4:227965013..228348926
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AA seq
1187 aa
AA seq
DB search
MAKNTLLAYFSKKPSPPVVSSGTSVNGGDKSSSLEASKVDAGVSCPYRLHDLVWAKLEGY
PYWPAMVSAPPGEGAFVKKHATQPSVHVQFFDSSPSRAWVKLRLTKPFTGVGDPAAHSSD
PRWTRGVSEAEKALALDPGDRVALLPVTDGSAAGNSTDEEDEQPSPKRRRLISDSSSEDE
FQPGKNEDGSDSDSASSGVDENTISDLEPESPEKSPPSKRPASKSPAVRKLASPKAKPAA
MVVATSGTWAHLSYDFLKEGKRRDAAGRLATHPDFNPHTLHVPESVKEKLTPAMRQWWEM
KAKHFDVILFFKVGKFYELYHMDAVTGVEELGLVFMKGDFAHSGFPEIAYGRYSEALIQK
GYKVARVEQTETPQMMEERCRKMHRPSKFDRVVRREICRITCRATRTFGPQDGQLCNPEP
AYLLAIVHSQASTSMDFGICFVDTSVGKFHLGQFRDDHFCSKLRTAVSHHPPVHVLYESD
PMLPTGLRQVLEGPLHAVSRQALRPGKELWDVPLTLRHLREGAYFGKEYPSALQSFLDPG
DPTYLTPQEDGCLALKALGACIWYLSESLIEEEVLTMRSFEKYVPPQANQATPDLNSLIL
DGVSLQNLEVLRNPSGGTEGTLLSTMDFCCTPFGKRLFQQWLCSPPCQVDVIEDRQRAVD
DLLRFPHEVQQTRELLRSLPDLERLLARIHSQGLARKSSSHPDQRAILYEDTAYNKRKIA
NLLQALQGFQKATQVAPLWVDVLPSLTSQVLTMCLSVGSEAGQFPDLADSLKFFENAFDH
EQARKEGRVTPMAGVDDDYDQAMQSIKEANKALQDYLGQQSRHFHCKASFVGSGKNRFQI
EVPESCARLADSSYQLQGQRKGFRRYYTEEVKRLVADLVSAEEAQETAVKDIMRRIFEHF
DRRRTQWEAAIHCLALLDGLLSLAHYSGSLTDASCTPRFLPCQAQPFLLVKAGRHPCLLE
HLGAAALIPNDLSLGGGKAPVLSLLTGPNMGGKSTLMRQAGLLVIIAHMGARVPADACEL
TPVDRIFTRLGASDRITSGESTFFVEVNETSAILRHASQHSLVLLDELGRGTSTHDGMAL
AHAVVQELASAICCCTLFSTHYHHLVEGFRLHPAVQLAHMACMVEDENAEDPTQETIVFL
YKCVPGPCPKSYGFNAAKLAGIPQQVIRRAFEKSHRLQERVQVACVC
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacacactgttagcgtatttcagcaagaaaccgagcccgccagtggtgagc
agtgggacttcagtgaatggcggagacaaaagttcgtcgctggaagcatctaaagttgat
gcaggggtgtcgtgtccttaccgtcttcacgacctggtttgggccaagctggaaggctac
ccctactggccagccatggtgtcggcacctcctggagagggtgcctttgtcaagaaacat
gccacgcaaccatcggtgcatgtccaattctttgactcatccccatctcgagcatgggtc
aagctcaggctaactaagccattcacgggagtgggggacccagctgcccattcttccgat
ccccgctggacccgtggtgtgtcagaggcagagaaggctctcgccctggaccccggtgac
cgtgtggccctgctccctgtgactgatggctcagctgcaggcaacagcactgatgaagag
gatgaacagccgtccccgaagaggcggcgcctgatctcggacagcagctctgaggatgag
ttccagccgggtaaaaatgaggatggaagcgattcagactcggccagcagtggcgtggac
gagaacactatctcggacctcgaacccgagtcacctgaaaagagcccgccgagcaagcgt
ccagcctccaagtcgcctgcagtccggaagctggcatcacccaaggccaagcctgctgcc
atggtggtggcaactagcgggacgtgggcacacctctcgtacgacttcctcaaggagggc
aagcgcagggatgctgctggtcgcctggctacccacccggatttcaatccacacacgttg
catgtcccagaaagtgtcaaggagaagctgactccggccatgcgtcagtggtgggagatg
aaggcaaaacattttgatgtgatcctcttcttcaaggtgggcaagttctacgaactgtac
cacatggatgcagtcactggagtggaagaacttggcttggtctttatgaagggtgatttt
gcgcactctggcttccctgaaattgcgtacggccgatactcggaggccctcatccagaag
ggctacaaagtggcacgggtggagcagaccgagaccccccaaatgatggaggaacggtgt
cgcaagatgcaccgtcccagcaagtttgaccgggtggttcggcgtgagatctgccgcatc
acgtgtcgggcgacgcggacctttggacctcaggatggccagctgtgtaaccctgagcca
gcctacctgcttgctattgtgcactcccaggcatcaaccagcatggacttcggcatatgc
tttgttgacacctccgtaggcaagtttcatcttggccagttcagggacgaccacttctgc
tccaagctacgtacagctgtgtcccaccatccacctgttcatgtgctgtacgagagtgac
ccaatgctgcccactggactccgtcaagtgctcgagggtcctctgcacgcagtctcccgg
caggcgctgcggcctggtaaggagctttgggatgtgccgctgacgctgcgccatcttcgt
gagggtgcctactttggcaaggagtatccaagtgccttgcagtccttcctggacccaggg
gaccccacatacctgactccgcaagaggacggctgtcttgctctgaaggcattgggtgcc
tgcatttggtatctgtccgagtctctgatcgaggaagaggttctgacaatgcgcagcttc
gagaagtatgtgccacctcaggccaatcaagccacaccagacctcaacagcttgatcctg
gatggtgtgagcctacaaaatctggaggtgctgcgaaatccatctggtggcacagaggga
accctgctttcaaccatggacttctgctgcaccccatttggcaagcggctgttccagcag
tggctgtgctcccctccatgccaagtggacgtgattgaggaccggcagcgggcagtcgac
gacctgctgcgcttccctcatgaggttcagcagacgcgtgagctgctgcgctcattgcca
gacctcgagaggctgctcgccaggattcacagccagggtttggcacgcaagagttcttcc
cacccggaccagcgcgccatcctgtacgaggacacagcatacaacaagcgcaagattgcc
aatctgctccaggcgctgcaagggttccaaaaggccacacaggtggcaccactctgggtg
gatgtgctaccatcgctgacgtcgcaagtgctgacaatgtgcctctctgtcggcagtgag
gcaggccagttccctgacttggcagactcgctcaagttttttgagaatgcttttgaccat
gagcaagcacggaaggagggccgcgtgacacctatggctggcgtggatgacgactatgat
caggccatgcagagcatcaaggaggccaacaaggccctgcaggactacctgggccaacaa
agccgccacttccactgcaaggcctcctttgtgggctcaggcaagaaccgcttccagatc
gaggtgcccgagtcctgtgcccggcttgctgactcttcctaccagctacagggacagcgc
aagggcttcagacggtactacactgaggaggtgaagcggcttgtggcagacctagtctct
gctgaggaggcccaggagacagccgtcaaggacatcatgcgccgcatctttgaacacttt
gaccgcaggcgaacccaatgggaggcagccatccactgcctggccctgctggatggcctc
ctgtcgctggcacactacagtggctcgctcactgatgcctcttgcacaccacgctttctg
ccatgccaggcacagccgttcctgctggtcaaggcgggacgccatccttgcctgctcgag
cacctgggcgcggccgccctcatccccaatgatttgtccttgggaggaggcaaggctcct
gtgctgagcctcctcacgggaccaaacatgggcggcaagtccactctcatgcgccaagct
ggcctgcttgtgatcatcgcccacatgggagctcgtgtgccagcagatgcctgtgaactc
acccctgttgaccgcatcttcactcggttgggagcaagtgacagaatcacttctggggag
agcaccttctttgtggaagtgaacgagacttcggcgatcttgcggcatgccagccaacac
tccctggtgttactcgacgaactaggccggggcacctccacgcacgatggcatggccttg
gcgcatgccgtggtccaggagctggcatcggccatctgctgttgcacgctgttctccacc
cactaccaccacctggtggagggcttccggctccacccggctgtgcagctagcacacatg
gcatgcatggtggaagacgaaaatgcagaggaccccacgcaggaaaccattgtgttcctc
tacaagtgtgtgccaggcccctgccccaagagctacggcttcaatgctgccaagttggca
ggcattccacagcaggttatcagaagagccttcgagaaatcccatcgtcttcaagagcgt
gttcaggtggcttgtgtttgctga
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