Dermacentor silvarum: 119452129
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Entry
119452129 CDS
T07348
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsv03036
]
119452129
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
119452129
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119452129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
119452129
NCBI-ProteinID:
XP_049521918
LinkDB
All DBs
Position
1:100613111..100828923
Genome browser
AA seq
2151 aa
AA seq
DB search
MATDAYKHAQGWKQRMNVIVLKVNSPTCFLIREAAGAEMSQSGREFISMEANMKQHMRKW
DIQPFTPLLPEIDSIVLVQNPSDKQWYRGCVRKIFDTMTGYRVEVFLVDYGETLMVDRKV
LRKVPSERILDVPFQCVEFSILGLKPVHWTIDPTSITMKFVIGSSWDAASIEYVKSTVEK
ADAVHVQVLGKTTSGGLYGKLFINCNKNVISLDEELVKLNFASLDTQASNEDVILDNDRP
DKNNQQSAEGSQNEGISENAIFWRDIQSKSVSAALKDVLDSVYDTSSSSIASIPLEVCIS
DVSPSESISASGASSPEQSSLSSTTLSIDASSSGTDTPPTLPGLGRGLALMLKLRELKGD
SSSHESDARGREYVEADEPSSSEESEDDGSYTPTVVGTPPRVFGEAETFCSPDSPGPLSS
VPPMPQLVSVRSKLEPTSETPEPAGASQFGEPRARGRARLLHLSPSPSSTSSPFEQSQMP
LPKNLDLSFSTKVHAPDTLTEKCAVSTEAAFTCEPLASEVCAADVKGLSPLAGIPELSAY
QSAGRGHALLRKLASSHSPGQHTSPLSSQSLSSQQNSFAQECPYMLSGSSQPERTVHNGD
NYSSQVVTKASRLKDLLEKKGRLLYVAPLQSCSSKTQGDNLANSPKPDATTDLVPALKIN
DVFAGSSLSCPGSSSNQIPSATMSTREMFLKLLATSNVEASSQPGKELADYSTAMDGFQS
SEDLGQVGFMHSICLTYHFIMALRKKNAGGGDAPRGASWSSTESSVSDDMEFVSDSDSDI
VSPTDETDILGWFHLEAVFVSRIWDLAVLMSITEASCRHFLKHIVVCFQRFYSFFQLFIC
VLSFCFSFCLFNRSPYLNTFPELPSDMDPCEQFKGDVYFKTDYDSCRSPSQPAIFKVRAL
CHGIRVPRPVTHLDQTPFDKSVKSLLCSKGFPGPSCIQSVVWPAVISGRDVVVVAPPHSG
KTFAYLIPLVSRLTEETDYESLPLGVGPLMVVLTSTWKGARRLSEQAKLLIHQKTGPKVC
VLYAGGAEKGKEIELVNGCDILVATPECFLRFLTNYDRLIVNLRRCCHLVLDDGEQLLDK
FAVEVTSVMKEFWRCTERRRPGMLQGQIVVCSTMWTSGLNCFTRMTYSSRTPLIMITSFY
EAAIYAQVPTIACFGDPQSRHEILLRILEGSHNRKVVVCTADRQSAIAVHQLLFSCCVCC
LLLHDELPMAKIWEVTNEWASELPKAKMPVLVVQDSVLPLANIRDAGVLIHYDVPELSKY
NFGFRFSCLADRMRSFDGKGTASTDEPVAHLILSSNNRSLSVQLVKFLNRLGATVPDGLR
KLAAEEETKASKNALVALCPNLKAFGHCERQTAEKRCLYRHQVIREADHSPSWADLPSQG
RVLIVVTKVVNASRFYAWILQHWDAPGSTNESKSKGKENLELQNAMVFLNEYLSQPSNCK
SLVGKALPKVGEVYGLEHSYGQFRRVLVISVVPKSSGPASVTVSHMDYGEQSTVAATRLL
HLPPELTKLQPFAVEVYCCRVQPQDHDLDWTFQAVFKSHELVFRKELLGKIVLRLGNTLW
LDPLVLWEDLPFVDVKVPLKNVRATLIEERLACDNAAHVESLCKLAADAGVTLPVFPEKK
ERNDSDSQNAVINQHCTTFLDTIEFNHVYLWKVTSPSHFYVQPLKFNSCLDVLEDNIQKA
VEKMELAKLKSVHPGAVCIARYNHDRCYRGEVQKVLNNAEVVVFFPDYGDTAKCPPDELL
EPLSWMMLLPYQGVQCSLAGIIPSSGQWTQTAVSMLEDFGYDNNNVNRLLCLRVVKKNAG
ERPGTSNYEVLLFSTCHEGRISAANLLVEEKLAIPTDLPKLSFDVNLPHSKVFQEQCTGS
SDSETDEDGEEVTLECQRKLEKYVFDVFSEVRDQVLAPAAAELLQELSCDSGTLGQGDTS
LQPQERGAEAQELCKKVDRKAAAKVKRAKAHSRSSTQDLPPLLESKFKAEHSLQASISWW
QDHSFVYVDILIANVKEYELNVTTAIFRIRMKTAEHEYFAHEGLYAAIRPKKTRLVQKAD
SLSITFEKVQAQLTWKFLTRNKRKVRYIRYKLDQIDVSDDEDDLVSACQAYKDPLFTGSE
YKQPAQILPYDPVAHEERAREMEAGIEDIDDTVEPMYFSIDPNNIFDDFIE
NT seq
6456 nt
NT seq
+upstream
nt +downstream
nt
atggctacagacgcgtataaacacgcacaaggatggaagcagagaatgaatgtcatagtc
ctgaaggtcaactcaccaacttgctttttgataagggaagcagcgggagcagagatgtct
caaagtggaagagaatttatcagcatggaggcaaacatgaaacaacacatgaggaaatgg
gacatccaacctttcacaccactactcccagagattgattcgattgttttggtgcaaaat
ccttcagataaacaatggtaccgtggatgtgtccgcaagatatttgacaccatgactggc
tatagagtggaggtcttcttggttgactatggagagacgctcatggtggaccggaaagtg
ttgcgcaaggtgccaagtgagaggattcttgacgtgccctttcaatgtgttgaattttca
attcttggactgaagcctgtgcactggacaattgacccaacatccattacaatgaaattt
gtgattggttcctcctgggatgctgcttccattgagtatgtgaagtcaacagtggaaaaa
gctgatgcagtgcatgttcaagtgctggggaagactacctcaggaggcttgtatggaaag
cttttcatcaactgcaacaaaaatgtcatatctcttgatgaggagctggtcaagctcaat
ttcgcttctttggatactcaagcaagtaatgaagatgtcattttggataacgacagacct
gacaaaaataatcagcaatcagcggagggatcacaaaatgaaggcatttcggaaaatgcc
atcttttggcgtgacatccagagcaagagtgtttctgcagctttgaaagatgtcctcgac
agtgtctacgacacttcttcaagcagtatagcaagcattcctttggaagtgtgtatatca
gacgtgtctccatcagagtccatttctgctagtggtgcaagctctccagaacagtcgtca
ttgtcctcaaccaccctttccattgatgcatcttcatcaggcacagacacacctcccaca
ttgcctggtcttggccgaggccttgccttaatgctaaagctcagggaacttaagggtgac
agctcatcccatgagtctgatgccaggggcagagaatatgtggaggctgatgaacccagt
tcaagtgaggaaagcgaggatgatggctcttatacccctactgtggtcggcactccacct
agagttttcggggaggctgaaacattctgttctcctgacagcccaggcccactgtcatca
gtacctccaatgccacagcttgtcagtgtcagatctaagctggaaccaacatctgagact
cctgaaccagctggtgccagccagtttggggaacctagagctcgtggtcgagctcggttg
ctccatttgtctcccagtccatcaagtactagttcaccctttgaacaaagtcagatgcct
ttgccaaaaaaccttgatttgagtttcagtaccaaggtgcatgcaccagatacgcttact
gaaaaatgtgcagtgtccactgaagcagcatttacttgtgaaccattggcctctgaagtc
tgtgcagctgatgtgaaaggcctaagtcctcttgcaggcatacctgaactatcagcatac
cagtctgcagggcgtggtcatgcactgttgagaaaactggcatcaagccactcaccaggc
caacacacttctccgctttcatcacagtcgctaagctcacagcaaaatagctttgcacag
gagtgtccctacatgctaagtggcagcagccagcctgaacgcactgtacataatggtgat
aactactcttctcaagtggtgaccaaggccagtcggctgaaggacctgttggaaaagaaa
ggacgtttattgtatgtggcaccattgcaaagctgctcatctaaaactcaaggtgacaat
ctggcaaattctcccaagcctgatgcaactacagacttagtgccggcactaaagataaat
gatgtgtttgctggaagttcgctatcatgtcctggtagcagcagtaaccagataccttcg
gcaacaatgtcaaccagagaaatgtttttgaagttacttgccaccagtaatgttgaggct
tcatctcaacctggcaaggagcttgctgactattctacagccatggacgggtttcagtca
tcagaagacttagggcaagttggcttcatgcatagtatttgtcttacctatcatttcata
atggcgcttcgcaagaagaatgccggtggcggcgatgctccaagaggtgcttcttggagc
agcacagaaagcagtgttagtgacgacatggaatttgtgtccgacagcgactcggacatt
gtctcgcccactgacgagactgacattctcggctggtttcatcttgaagcagtgtttgta
agcaggatttgggatttagcagtattgatgtcaattactgaagcaagctgcagacatttt
ttaaagcacatagtagtttgctttcaaagattttacagcttttttcagttgtttatttgt
gtgctttcattctgtttttctttttgcctatttaacaggagcccttatttaaataccttt
cctgaactgccatcagatatggatccctgtgaacagtttaagggtgatgtatacttcaag
actgattatgattcttgcagatcgccatctcagcctgcgattttcaaagttcgggctctc
tgccatggcattagagtacctaggccagtgactcaccttgaccagacaccatttgacaag
tctgtgaaatcactgttgtgttccaaagggtttcctggtccatcatgcattcagtcagtg
gtctggcctgcagtgatatccggtagagatgttgtagttgtggcaccgccacattccggc
aagacgtttgcttacctgatcccactggtttcaagattgaccgaggaaactgactacgag
agtctgcctctaggcgttggacccctaatggtagtcttgacatccacatggaaaggagct
cgccgcctgagtgagcaggccaaactgctcatccatcagaaaacgggtccaaaagtctgc
gtcttgtatgctggaggagcagaaaaaggaaaagagatcgaattggtcaatggctgtgat
attctggtagcaactcctgaatgttttctgcgctttctgaccaattatgatcgtctcatc
gtcaacttgcgtcgatgctgccatttggtgctggatgatggtgaacagctgctggacaag
tttgctgtagaggttacttctgtgatgaaagaattttggcggtgcacagagcggcgccga
ccaggcatgctccaaggccaaattgtggtttgctcaacaatgtggactagtggcctgaac
tgctttacacgtatgacgtactctagcagaacccccttgatcatgatcacttcattctac
gaggctgccatctatgcacaggttccaacaattgcctgctttggtgacccccaaagtcga
catgaaatcttgctcagaattctggaaggcagccacaatcgaaaagtggttgtgtgcact
gccgacagacagtcagccattgctgtgcatcagttgctcttttcatgttgtgtctgttgc
ttgctgcttcatgatgagcttcccatggcgaaaatttgggaggtgacaaatgaatgggca
agtgagcttccgaaggccaagatgcctgtccttgtggttcaagacagtgtgctgccattg
gccaacattcgtgatgctggggttcttatccactacgacgtacctgaattgtccaagtac
aactttggctttcgcttctcctgccttgctgaccgaatgcgttcattcgatggaaagggt
actgcttctactgatgaaccagtggcccacctgatactttcgagcaacaaccgcagtctc
tctgtacagcttgtaaagtttctgaacaggctaggcgccactgttccagatggactgagg
aagcttgctgctgaggaggaaactaaagcatcaaaaaatgccctggtggccctgtgcccg
aatctcaaagcattcggtcattgtgaaaggcagacagcagagaagcgctgcttatatcga
catcaggtcatacgtgaagcagatcactcaccgtcatgggcagacctgccatctcagggc
cgagtcctcattgtagtgaccaaagtggtgaatgcgtcgcgcttttatgcatggattctg
cagcactgggatgcacctggttcaacaaatgaaagcaaatcaaaaggtaaagagaacctg
gagcttcagaatgccatggtgtttctgaatgaatacttgtcacagccaagtaactgcaaa
tctctggtcggaaaagccttacccaaagttggtgaagtttatgggctggagcacagctat
gggcaattccgtagggtcttggtaatttcagttgtgccaaagagttctggtccagctagt
gtcactgtttcgcacatggactatggggaacagtcaactgtggctgcaacaagattgctt
catctaccgccagagctaactaagctgcagcctttcgcagtggaagtgtactgctgtcgt
gtccaacctcaggaccacgatctcgattggactttccaggcagtcttcaagtcacatgag
cttgtgtttaggaaagaacttcttggcaagattgtgctgcgacttggaaataccttgtgg
cttgacccacttgtcttgtgggaggaccttccatttgttgatgtaaaggtgcccttaaag
aatgtgagagctaccctcattgaagaacgcctagcttgtgataatgcagcccacgtggag
agcctgtgcaaactggctgccgatgcaggagtcacactacctgtatttccagaaaagaaa
gaaaggaatgacagtgacagccagaatgctgttatcaaccagcattgtaccacgtttctt
gacacgattgagttcaaccatgtgtacctctggaaggtcacctctccatctcatttctac
gtacagcccttgaagttcaattcatgtttggatgtgcttgaggataacatccagaaggct
gtggaaaaaatggaattggccaagctgaagtcggtgcatcccggagcagtgtgcatcgct
cgctacaatcacgatcgttgctatcgtggggaagtgcagaaagttctcaacaatgcagaa
gtcgtcgtattttttcctgactacggagatactgcaaagtgccctccagacgagctgttg
gagcctctttcgtggatgatgttgttaccataccagggcgttcagtgctctttagctgga
atcattccatcctctgggcagtggactcaaacggctgtgtccatgcttgaagattttggc
tacgataacaacaatgtgaatcgtctgctatgtctcagggttgtaaaaaagaatgcagga
gagcgtcctgggacaagtaattatgaggtgctgttgtttagcacctgccatgaaggaaga
atcagtgccgctaatcttcttgtagaggagaaacttgctattccaacagacctgccaaag
ctcagctttgatgtcaaccttccacattcgaaggtatttcaagagcagtgtacaggttca
agtgatagtgaaactgatgaagatggagaagaggtgacgcttgagtgccagaggaaactg
gagaaatatgtgtttgatgtgtttagtgaagttcgtgaccaggtccttgcacctgcagct
gctgagctcttgcaggagttgagttgtgacagtggtacgcttggccaaggagacacttct
ctccagccccaagaaagaggagcagaggcacaagaattgtgcaagaaagttgacagaaag
gctgcagcaaaggttaagcgagccaaagcccattcgcgaagctccacacaggatctccct
ccactgctggagtccaagttcaaggcagagcacagccttcaagcatccatctcatggtgg
caagatcatagctttgtctatgtggacatcttgattgcaaatgtaaaggagtacgagctg
aatgttactacagcaatatttcgcatcagaatgaaaacagcagagcatgagtactttgct
catgaggggctttatgctgccatcagaccaaaaaaaacaagactggtgcagaaagctgac
tctttgagcatcacctttgagaaagtacaagcccagctgacatggaagttcctgactaga
aacaagagaaaggtgcggtacattcgctataaactggatcaaattgacgtgagtgacgat
gaggatgacttagtcagtgcctgccaggcttacaaggaccccctcttcacaggttcagaa
tacaagcaaccagcacagatcttgccatatgacccagtggctcatgaagaaagggcaagg
gaaatggaagcaggcatcgaagacatagatgatacggtcgagcccatgtacttcagcatt
gatccgaataatatttttgatgacttcatcgaataa
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integrated database retrieval system
