KEGG   Dermacentor silvarum: 119452831
Entry
119452831         CDS       T07348                                 
Name
(RefSeq) DNA ligase 1-like isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
dsv  Dermacentor silvarum
Pathway
dsv03030  DNA replication
dsv03410  Base excision repair
dsv03420  Nucleotide excision repair
dsv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119452831
   03410 Base excision repair
    119452831
   03420 Nucleotide excision repair
    119452831
   03430 Mismatch repair
    119452831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsv03032]
    119452831
   03400 DNA repair and recombination proteins [BR:dsv03400]
    119452831
Enzymes [BR:dsv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     119452831
    6.5.1.6  DNA ligase (ATP or NAD+)
     119452831
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     119452831
DNA replication proteins [BR:dsv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    119452831
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     119452831
DNA repair and recombination proteins [BR:dsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     119452831
   NER (nucleotide excision repair)
    Other NER factors
     119452831
   MMR (mismatch excision repair)
    Other MMR factors
     119452831
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 119452831
NCBI-ProteinID: XP_049523265
LinkDB
Position
5:complement(5623380..5650282)
AA seq 776 aa
METESTPEADNKKVKTDPAASPKHKEMETKSTPEADKKVEPKKEKDENKQMDEKKLTKVS
PPTKKEPKDEKPSKKSRSSSPKDEKPSKKSKSPSPKDEKAKEKPQAVAGKKLQNFAFTSG
KSDQNSSAASQVCNYDPTKANYDPVEDACWKKGAKVPYLALAITLDKIDGISGRLRIMEV
LSNFLRSVLILSPDDLLSAVYLCLNKIAPDYQGLELGIGESLLVKALAEATGRTPDKVRA
EASAKGDLGLVAESSRSQQRVLFAPPPLMLSHVFTKLRAIAEMTGNSVQQKKVDIIKVLL
VACRQCEARFLVRSLGGKLRIGLAEASLLTALAHAAALSPPHGDPKASKKRLEEAALLVK
TAYCECPDYERLINALLEEGVDSLPKRCRLSPGIPLKPMLAHPTKAISEVLNRFEGSAFT
CEFKYDGERAQIHLLEDGSVRIYSRNQEDNTGKYPEVVSRIRAAITPDTKTCILDSEAVA
WDRPSQTILPFQTLSTRKRKDTTEEEVKVQVCVFAFDLLYLNGESLVKETLRKRRELLRK
ILVEVPGETQLARSADLSTVEDIQEFLQESIKGSCEGLMVKSLDTVATYEIAKRSHNWLK
LKKDYLDGVGDSVDAVVLGGYHGKGKRTGTYGCFLLGCYDPDNEEFQTLCKIGTGFSEEQ
LDQHSAFFKEHVIPAPKSYYRFDSSLAPDAWFEPCQVWEIKSADLSVSPVHKAALGLVDP
EKGISLRFPRFIRIRDDKSPEDATSAQQVADLYNKQDHIKNKKAVIQETAAEEDFY
NT seq 2331 nt   +upstreamnt  +downstreamnt
atggagacagagtctacacctgaagcagacaacaagaaagtcaagaccgacccagctgcg
tcgcctaaacacaaggagatggagaccaagtctacacctgaagcagacaaaaaagtggaa
ccaaaaaaagaaaaagacgaaaacaaacaaatggatgaaaaaaaactaacaaaagtctcc
ccaccaacgaagaaagaacccaaggacgagaagccatctaagaagtccaggtcctcgtct
ccgaaagacgagaagccatctaagaagtccaagtcgccatctccgaaggatgagaaagcc
aaagaaaaaccgcaggccgtagccggaaagaagctccaaaactttgccttcacgtctgga
aagtcggaccagaattcgtctgctgcgagccaggtatgcaattacgaccctaccaaggcc
aactacgaccccgtggaagacgcctgctggaagaagggcgccaaggtgccgtaccttgcc
cttgccatcaccttggacaagatcgacggcatctcgggcaggcttcgcattatggaagtt
ttgagcaacttcctgcgctcggtgttgatcctgtcgcccgacgacttgctgagtgctgtc
tacctctgcctcaacaagatcgcacccgactaccaaggtcttgagttgggcattggcgag
tcactgctggtcaaggcacttgccgaggcaacggggcgtactccggacaaagtgcgggca
gaagcctcagccaaaggcgacctaggccttgttgcagagagcagccgcagccaacaacgg
gtgctgttcgcaccgccgccgctgatgctgtcgcacgtctttaccaagttgcgggcaatt
gcggagatgactggaaactcggtgcagcagaagaaagtcgacataatcaaggtcctgctc
gtcgcctgccgtcagtgcgaagctcggtttctcgtgcgctcgctcgggggcaaactgcgc
attggcctggccgaggcatcgctgctgaccgccctggctcacgcggctgcactctcgcca
cctcacggggaccccaaggcatccaagaagcggcttgaggaagcggccttgcttgtcaag
acagcttactgcgagtgtccggactatgagcgactgatcaacgccctgctggaagagggc
gtcgactcgctgcccaagcgctgccggctgagtcccggcatccctctgaagcccatgctc
gcccatccgaccaaggccatctcggaggtgctcaaccgcttcgaggggtcggccttcacg
tgcgagttcaagtacgacggcgagcgagctcagatccacctcttggaagatgggagcgtg
cgtatctacagccgcaaccaggaggacaacacgggcaagtacccagaggtcgtgtcgcgc
atccgagcggcaatcacgcccgacacaaagacctgcatcttggacagcgaggcagttgcc
tgggaccgtcccagtcagaccatcctgccgttccagacgttgagcactcgaaaacggaag
gacacaacagaagaagaggtcaaggtccaagtctgtgtctttgctttcgaccttctgtat
ctcaacggtgaatccctggtcaaggagaccctgcggaagcgcagggagcttctccgcaag
atcctcgttgaggtacccggcgagacccagctggcgcgctcggccgacctgtcgacggtc
gaggacattcaggagttcctgcaagagtccatcaaaggcagctgcgaaggtctcatggtc
aagtccttggacactgtggctacgtatgaaattgcaaagcgctcccacaactggctcaag
ttgaagaaggactacctcgatggcgttggtgacagcgtggatgccgtggttcttggtggc
taccatggcaagggaaagcgtacgggcacgtatggttgcttcctgcttggctgctacgac
cctgataatgaggagttccagacgctctgcaagatcggcaccggtttcagtgaagagcag
ctggaccagcactcggccttcttcaaggagcacgtcatcccggcgcccaagtcgtactac
cggtttgacagtagcctcgcacctgatgcctggttcgagccctgtcaggtgtgggagatc
aagagcgccgacctctcagtctcacccgttcacaaggcagcccttggactggttgatcct
gagaagggcatttccctgcggtttcctcggtttatcaggatacgagatgacaagagccca
gaagatgccacttctgcccaacaggttgcagacttgtacaacaagcaagaccacatcaag
aacaaaaaggcagtcatccaagaaactgcagccgaagaagatttttattaa

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