KEGG   Dermacentor silvarum: 119453022
Entry
119453022         CDS       T07348                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
dsv  Dermacentor silvarum
Pathway
dsv03013  Nucleocytoplasmic transport
dsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119453022
  09122 Translation
   03013 Nucleocytoplasmic transport
    119453022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsv03019]
    119453022
   03041 Spliceosome [BR:dsv03041]
    119453022
Messenger RNA biogenesis [BR:dsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     119453022
Spliceosome [BR:dsv03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    119453022
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_CDC20-Fz DSE1_N Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd TRM82_WD WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st WDR54 CFAP251_N Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_Aladin KNTC1_N WD40_RFWD3 Beta-prop_NOL10_N ANAPC4_WD40 Beta-prop_WDR75_2nd Beta-prop_SCAP WD40_MABP1-WDR62_1st WD40_CFAP43 Beta-prop_VPS8 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 119453022
NCBI-ProteinID: XP_037570926
LinkDB
Position
5
AA seq 329 aa
MENLRKYYTVIYAQCFSPCNKYLVAASSYGEIAVFVASNFLSGDDEENSREPFYKFAAHS
GSIFALVMCDDFLISGASGEIFAWNWDKLKRRTAEKCWALSIPQGESIVQPEVNALVLSG
KDSDQRLLIAGCGDNKIYVWDVETRTLLSTLARHTDYVHDLALASNNTQLYSAGEDGAVL
CWDVRSLQREVFHIEPFKQEELQRPRFGKWIGCVALEAGDEWLLCGGGPTLCIWHVPTSS
PATPLTDLARPAHVAHFYDDMVVAGGGEPNLYHWDFSGQLKAKIDTSASSLYSVVFHLDP
PHKGLCAAGSSCKIEVCTNFLYRDFSLHF
NT seq 990 nt   +upstreamnt  +downstreamnt
atggaaaacttgcgcaagtattacactgtgatatacgcgcagtgtttttccccttgcaac
aagtacctcgtggcagcgagcagctacggggagattgcggtcttcgtagcgtccaacttc
ttgtccggcgatgacgaggaaaactccagggaacccttctacaagttcgcggcgcactcg
ggcagtattttcgcccttgtcatgtgcgacgacttcttgatcagcggagccagcggggag
atattcgcctggaactgggacaagctgaagaggaggacggccgagaagtgctgggccctc
agcataccgcagggcgagagcatcgtccaacccgaagtcaacgccctggttctctccggt
aaggactcggaccagaggctcctcatcgccggctgcggagacaacaagatttacgtctgg
gacgtcgagacgagaacgctgctgtcgacgctcgcgaggcacacggactacgttcacgac
ctcgccctggcgtcgaacaacacccagctgtactcggcgggcgaggacggcgccgttctc
tgctgggacgtgcgcagtcttcaacgcgaggtgttccacatcgaaccgttcaagcaggag
gaactgcagcgtccgcgcttcggcaagtggatcggctgcgtcgcgctggaagccggcgac
gagtggctcttgtgtggcggcggtcccaccctctgcatctggcacgtccccacgtcgtcg
ccggcgacgccgttgaccgatctcgcgaggcccgcgcacgtggcccacttctacgacgac
atggtggtcgcgggcgggggcgagccgaacctctaccactgggacttcagcggtcagctc
aaggcgaagatcgacacttcggcgtcgagcttgtacagcgtcgtctttcacctggacccg
cctcacaagggactctgtgcggcaggctcgagctgcaagatcgaagtgtgcacaaatttt
ctctaccgggacttctccttgcacttttag

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