Dermacentor silvarum: 119453525
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Entry
119453525 CDS
T07348
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119453525
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
119453525
3'-5' decay
Other 3'-5' decay factors
119453525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
ResIII
AAA_19
AAA_16
zf-CCCH
UvrD-helicase
AAA_22
AAA_7
zf-C2H2_jaz
GpA_ATPase
Bac_DnaA
SF3a60_Prp9_C
DEAD
LSDAT_euk
zf-met
Motif
Other DBs
NCBI-GeneID:
119453525
NCBI-ProteinID:
XP_037571497
LinkDB
All DBs
Position
5:complement(81439136..81516273)
Genome browser
AA seq
1524 aa
AA seq
DB search
MSWADIASDFACEFCGVSFDGEKEFRDHCNSPEHRTVLVSDGGRTWKHRPPPRGVPADKL
SVCQDHHIYGQCRLGSQCCEAHSEDELVEWLERLRYRMERVKKAQQKHLEGYQEYAKDLL
EKYAGAKDPTAMQRVMTETMPGLRLTCKQQLKRTVTSKETALVWDFELCTITPLQRLVLL
HDTFRGHFELKRVEKSPFKFVLAPGCQEWVNSLRAPTNKDVLVYFIQVGFKSSMYATFVQ
TLAFDFGGYPVLIRNFSVDMVAPDTMSTIERSRRLILTGMGRWNTAAIDLVPFTERRSAK
AQSLFDMYPAPDVDTFHLTQAVIGDELTRENYGARMHELLYVEEMARADIIAQYNIRVSL
DVTDNLQTSSANSTEAYYAQGGELFACLRLDADITEDTAAGRLVLQNCQLVWLAPINVID
TEEGKPRKPRVYELPIHLARKDRVYIRLTKECVDEFTLKPHTSFDAEVQFLLDRQPLCEM
HYAVDKLPMASLVFPDFNIRPPRCPPERSLSWDPRLNERQRQAVAAIVAPRTVPNVPPVL
VVGPFGTGKTFTLAKAMLEVVKQMPESRVLVCTHSNSAADLYVLEHLDKEVQNHPALCPL
RILYEYRMPNRVDRRLLQYCLEVPREQQSKHGPWFRQPTAEEIEAHRVVVTTLSSSQMLL
ASNIKRGFFTHIFIDEAAQAMETECILPLALADEHTRVVLAGDYMQLNPEVFSVFTRQRR
LHVSLLERLHDAFQRATRGSGDTQHPCQVVLEDNYRSHEALVRFTSESFYGGRLRALGSP
GPHHLLHALSFFAARGEDVPRDGSTSYVNYMEVREVCDVVKRLVEQWPMTWGPRDPSTVA
IVTPYYDQVQCIRMELRKYKLSQVRVESVANVQGKEFRAVILSTVRTRATCVDLERTTPF
RTALNFGFLSDAKLLNTALTRAQSLVVVVGDPVSLCSIGDCRTLWEKFVSTCARQGSLFN
MQWEDVKYQLEGFELQKEYGLNPHAKSFWPKHLFLDRPPVADPQPPVQPTPTHGFKGPPG
LTVPYRHVPAAPPDYYMPTIDRRLFGVTPPRAPGFFPPLHLSQGNPSWGQGLPPGPRPSH
QQQAAKMYQQHLQQLQAQAQRQQQYPQMWAPYLPHAPARPAHYQHFPPAQARPIGQPQQH
GQPVHWSQPVASHRLPQHLPQQQLPSQLPPRQPQMEPETVSQPSMQPNFHSQSSTYVQKE
QPHQQLQQQLQCRPPLGFNSDPSLSANDMCGASGATAVARAAGDNLGSMDASFRNMLLDD
DDSGWTCVSVNKQTTNGTGPEARLPRKKKTVAPRFAAQQCPSRPASQPSSQPERPLKVPS
NGVTAGGSSATRTVSQVQQLSQQAWPEVSKSNSSTQNGGTQVKPKVFRNSAWPGGQDRMA
QSQAARQKARPTVAYVAAVSEPVTWENKNKPFSETQRSMGNSATSSHGTISDINFGLDLY
KAFTSDEESYKDCAKDSTKLTDTLRVGFAQAGRQTTYSAAGQTTAGSKFGPIGSRPPDKP
KLSYSDALRNGHVNGFVTPNASKH
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgacatcgcgtctgatttcgcgtgtgagttctgtggggtgagcttcgat
ggggagaaagagtttcgtgaccactgcaactcacccgagcaccggacggttcttgtgtcc
gacggcggccgtacatggaagcaccggccaccgccacgtggcgtcccagccgacaagctc
tcagtctgtcaagaccaccatatttatggacagtgccggctgggaagccaatgctgcgag
gcccacagtgaggatgagctggtcgaatggctggaacgtcttaggtatcgcatggagagg
gtcaagaaggctcagcagaagcacctcgagggttaccaagagtatgccaaggatctgctg
gagaagtacgcgggggccaaggatcccacggccatgcaaagggtgatgacagagacaatg
ccgggtctcaggctcacctgcaagcagcagctcaagcgcacggtcacctctaaggagacc
gcgctggtctgggattttgagctgtgcacgattacgccccttcagcgcctggtcctgctg
cacgacaccttccggggccactttgagctgaagcgggtggagaagtccccgttcaagttc
gtgcttgctccaggatgccaggagtgggtcaacagtctccgggcgcccaccaacaaggat
gtgctcgtctactttattcaggttggcttcaagtcatccatgtatgccacgtttgtgcaa
acattggcctttgactttggcggctaccccgtgctgatacggaacttcagcgtcgacatg
gtggcaccagacacgatgagcaccattgagcgcagccgccgtctcatcttgacgggcatg
ggacgctggaacacagctgctattgacctggtgcccttcacggaacgcaggagtgccaag
gcgcagagcctgttcgacatgtacccggctccggatgtggacacgttccacctgacacaa
gccgtcattggagatgagctaacccgcgagaactatggggcacggatgcacgagctgctc
tacgttgaggagatggcacgcgcagacatcattgcccagtacaacatacgggtgtccctc
gatgtcacggacaatctgcagacgtcgtcggccaactcgactgaggcatactatgcccag
ggtggtgagctgtttgcttgcctgcgcctcgatgcagacatcactgaggacaccgccgct
ggccgtctggtcctgcagaactgccagctggtctggctagcccctattaatgtaattgac
acggaagagggcaagccacgcaagcctagggtgtatgagctaccgatccacctggccagg
aaggaccgcgtctacattcggctaacgaaggagtgcgtcgatgagttcacgctgaagccc
cacaccagctttgatgcagaggtccagttcctgctggatcggcagccactgtgtgagatg
cattacgctgtggacaagttgcccatggccagtctcgtgtttcccgacttcaacatccgt
cctccacgatgtccaccggagcggtcgctgagctgggaccccaggctcaacgagcggcag
cggcaggcggtcgcggccatcgtggccccacgcacggttcccaatgtcccgcccgtccta
gtggtgggccccttcggcacagggaagaccttcacgctggcaaaggcgatgctggaggtt
gtcaagcagatgccagaatcccgtgtgctggtctgcacccactccaacagtgcggctgac
ctgtacgtgttggagcacctggacaaggaagtgcagaaccatccagcactgtgccctctc
aggatcctgtatgagtaccggatgcccaaccgtgtggaccgacgactactccagtactgc
ctcgaggtgcctcgggaacagcagtccaagcatgggccttggtttcggcagccaactgcc
gaggagatcgaggcccaccgtgtggtggtcacaaccctgtcgtcgtcccagatgctcctt
gctagcaacataaaacgaggcttcttcacgcacatcttcattgacgaagcagcgcaggca
atggagacggagtgcatcctgccccttgccctggctgacgagcacacccgggtagtgctc
gctggagattacatgcagctgaacccagaggttttctcggtgttcacgcgtcagcggcgt
ctgcacgtgtccctgctggaacgtctgcacgacgcgttccagcgtgccacccgaggcagt
ggggatacccagcacccgtgccaggtggtgctcgaagacaactaccggtcgcacgaggcg
ctggtgcggttcacatcggagagcttttatgggggccggctacgagcccttggaagtccc
gggccgcaccacctgctgcacgcactgagcttctttgcggcacggggcgaggacgtgccc
cgcgatggcagcacctcctacgtcaactacatggaggtacgtgaggtgtgcgacgtcgtc
aagcggctggtagagcagtggcccatgacctggggacctcgcgacccatcgaccgtggca
attgtgacgccctactatgaccaggtacagtgcattcgtatggagctacggaaatacaag
ctctcccaggtccgagtcgagagtgttgccaacgttcaaggcaaggagttccgcgctgtg
attctgagcacggttcgtacgcgcgccacctgcgtggacctggagcggacgacgcccttt
aggactgccttgaacttcggcttcctctcggatgccaagctgctcaacacggccctgacg
cgggcgcagtcgctggtcgtcgttgtcggggaccccgtctcactgtgctccattggtgac
tgtcggacactctgggagaagtttgtctcgacttgtgcacgacaaggcagcctgttcaac
atgcagtgggaggacgtcaagtaccagctggaaggcttcgagctgcagaaagagtatggc
ctgaacccccacgccaagagcttttggcccaagcatctcttcctggacagacccccagtg
gccgatccgcagccgccagtgcagccgacaccgacacacggtttcaagggaccgccaggc
ttgacggtcccgtacaggcacgtgccagcggccccaccagactactacatgccaaccata
gaccgccgtctctttggcgtgacacctcctagagcaccaggcttctttcctcccttacat
ttgagccaaggcaatcccagctgggggcaaggactgccaccggggccacgcccttcacac
cagcagcaagccgccaagatgtaccagcagcacctgcagcagctgcaggcacaggctcaa
cggcagcagcagtatcctcaaatgtgggctccgtacctcccacatgcgccagcgcgtccg
gcccactaccagcacttccctccggcgcaagctcggccgattggtcagccacagcagcat
gggcagccagtgcattggtcgcagccagttgcttctcacagactgccacagcaccttcct
cagcagcagctgccctctcagcttccacccagacagccgcaaatggagccagagacagtt
tcccagccaagcatgcagccgaacttccacagtcagtcaagtacttacgtccaaaaagaa
cagccacaccagcagcttcagcagcagctgcagtgcagacctccacttgggtttaactcc
gacccaagtctctctgcaaatgacatgtgtggggcctccggtgccacagccgttgcacgg
gctgcaggcgacaatctcggctcaatggacgcaagcttccgtaacatgctgcttgacgat
gacgacagtggctggacatgtgtcagtgtaaacaaacagacgacgaatggaactggtcca
gaagcacggttgccacgcaaaaagaagacagttgcgccgcgattcgcggcacagcagtgt
ccaagtcgaccagccagccaaccttccagccagcctgaaaggccgctgaaagtgccgtcc
aacggagtgaccgcggggggaagctctgctaccaggactgtttcgcaagttcaacagctg
tcacaacaggcttggcccgaggtcagcaaatcaaactcgagcacccaaaatggaggaacg
caggtgaagcccaaagtgttcaggaactctgcatggcctgggggacaagatcgtatggca
caatctcaggcggcaaggcagaaagctaggccaacagtcgcttacgtcgctgctgtgtcg
gagcctgtgacctgggagaataagaataagccatttagcgagacacagcgatcgatggga
aacagtgccacttcgtcacatgggactattagcgacatcaactttggtctggatctgtac
aaagctttcaccagtgatgaggagtcctacaaggactgcgcgaaggactctaccaagctg
acagacactcttagggtgggatttgcacaggctggcagacagacgacatactctgcggct
ggtcagacgacagcaggatctaagtttggtcccattggaagtaggccacctgacaagcct
aagctatcttacagtgacgcattgcgcaatggccacgtgaatggctttgtcacacccaat
gccagcaaacattaa
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