Dermacentor silvarum: 119453900
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Entry
119453900 CDS
T07348
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119453900
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119453900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_2
ResIII
HEAT_EZ
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
119453900
NCBI-ProteinID:
XP_049523025
LinkDB
All DBs
Position
5:complement(170852441..171048063)
Genome browser
AA seq
1959 aa
AA seq
DB search
MTSRLDRLFLLLDTGSSPVTRRAAAVQLGEVQKLHPHELHNLLAKVRKYLHSSSWDTRIA
ASQAVEAIISHVPQWDPPGLSKEEQADGEPAKPGAGNAKSPSHWMRFENFDLHQVLKHGG
DLLASEGSEFDLDDDLLGGSHSKEVLLQQRRLLNRRLGLEMAEHIGLDTSELFSAEDLSL
NCSSGGAGLRIGTTPDGTNAASPPYVKLECNTTSGYYPECGVPPSPVTSLPPHPMPSSMV
GSVIGHIPAPPLPCPSPGLFRGPKRRASLVKDGPCLSKRVCGGGAANSTAIKEEAPSDGS
VGENLWEEQCSGEWPLEAFVEALCQDLFSAAWEIRHGAATALREVVRLHGRGGGRSFSTP
AAQMETSNQLFLEDLSLRLLCVLALDKFGDFVSDQVVAPVRETCAQTLGHVLNLMTSDKW
DCNSDSDGAANSSAGVGVWGVLRVLLQLLQRPEWEARHGGLLGIKYLLAVRKDLTSVLIP
AVFEPVFQGLQDQNDDVSAVAAAALVPVTEDLVKTLPHEVPRVVRTLWDALLELDDLTSS
TSSILMLLAALLSHSASVRPTKGTDAVGCLHDGEQQKLVNSADDTASTNNSCVAGDGVPL
AQWVPRLWPFLGHNAVAVRLSVLRSLLILCSDKSAPLPLSEWIPGLLPCMLRLLYQRCLL
ETSSDVLDLIYQVWEKVVRGAPLGPLLTTACPYLSSWLCLLMHPAHLQVDVVALQWLVLP
PNLKPDKRMRRPGSVGGCGPLLPPCSTEGGPGVTPVLGGGEVYLAGAESLNESPVERERL
VLQCRCMAAKLLGLLSGFVTRPMPGLEVPPVESPVESFARLVLFHLASKSALQRMMTAAV
MAHWVTLHPEDHLCPTSVRDRVLECLGETLYFDEMASSFTRLQQDARDFIALLRHFQLPL
GAGFPANVVLTVDQVIELVTTVFHGLVQEVRVKPKVLENLEEKRKFLLRTAQQMQKDQIS
LTTRVQSSLATFLVRLDQLPEKLNPVIRPLMESIRREESPLLQGESADSLVHLMGSCVDR
NPCPNGKIVRNLLTYLCLDPSVTPAAAPGTPSATPSTAPILTLANMQKSAERAPVRRSGS
VSGGRKGSLQAAQSIESADDSNSAEDENVQRQNEIQRKGAAQVLSLATEHFGASLPDRLP
SLWEATVEPLLRRGSTANAAASSDGVVRNGVAEPSSEAALAETQELTTALQALEVIGPHL
HPGLYSKLDATLPPLCAALDHPSPVVRHLASRCFGMMARVRTVPTMATVVDKVLAKLGAS
DDDVQRRGAVEAIACVIEGLSLGIVPYLVFLVVPVLGRMSDQNEAVRLMATHCFAALVRL
MPLDSGAIDEAGGPLSAELRERRASERHFLEQLMNARHADNYELSVPINAQLRSYQQEGV
NWLAFLNKYSLHGILCDDMGLGKTLQSICILASDHHKREQLYKETQRADAKPLPSLVVCP
PTLTGHWVYEVEKFVDSKYLQPLHYTGPPMERARLQEKARKHNLVVASYDIVRNDIDFFG
TIRWNYCILDEGHIIKNGRTKLARALKQLQANHRLILTGTPIQNQVLDLWSLFDFLMPGF
LGTERQFAQRFSRPILQSRDAKSSSREQEAGVLAMESLHRQVLPFLLRRVKDDVLQDLPP
KIIQDYYCELSPLQVQLYEDFARSRAKKSVDDSVAGAAEDQPVNSHATAHVFQALQYLRK
VCNHPKLVLNPQHPEYGRIMAGLQQSESCLSDINHAAKLRSLRQLLLDCGIGTAAQPEQE
SVVHAHRALIFCQLKGMLDIVEKDLLMAHMSSVSYLRLDGSVAPGQRQALVQRFNADPSI
DVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRGT
LEEKIMGLQKFKLTIANTVITQENSSLNTMGTDQLLDLFTLGSDGAKADTMLDTAQNSSA
GPSRVGMKGVLESLPELWDSSKYDSEYDLGNFLSTLKPK
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaggctcgaccgtctgtttctcctcctggacacgggctcctcacctgtgaca
cggcgagcggccgcagtccagttgggcgaggttcagaagctccacccacatgagctgcac
aacctgctggccaaggtccgcaagtacctgcacagttcatcatgggacacgcgcatagca
gcaagccaagctgtggaggccatcatatcccatgtgcctcagtgggaccctccaggattg
tctaaggaggaacaagcagacggcgagcctgcaaagcctggagcagggaatgcgaagtct
ccatcacactggatgcgttttgagaactttgacctccaccaagttctgaagcatggcggt
gacctcctcgcatccgagggttcggagtttgacctcgatgacgaccttctcggcggctcg
cactccaaggaagtgttgctgcagcagcgacgcctgctcaaccggcgtttgggcctcgag
atggccgagcacattggcctcgacacctccgagctcttctctgctgaggatctcagcctc
aactgcagcagcggaggagcggggctgcggatagggacgacaccggatggcaccaatgct
gcgtccccaccatatgtcaagctggagtgtaacaccacatcgggatattatccagaatgt
ggcgttcctcctagcccggtgacatcattgccaccgcacccgatgccctccagcatggtg
gggtcggtgattggccacatccccgctcccccgctgccgtgtccctcgccgggcctgttc
cgtggccccaagcgacgtgcgagtctcgtcaaggatgggccctgcctgtcgaagagggtc
tgcggaggaggtgctgccaactctacggccatcaaggaagaggcaccatccgatggcagt
gtgggcgagaacctctgggaagagcagtgttcgggcgagtggcccctggaggcctttgtg
gaggccctctgccaggacctgttcagcgccgcctgggaaatcaggcacggtgcggccacg
gcactgcgcgaggtggtccggctgcacggccgcggaggaggacgctccttcagcacaccc
gctgcacagatggaaacctccaaccagctgttcctggaagacctgtctctgcgattgctc
tgtgtcctcgctctggacaagtttggggactttgtgtccgaccaggttgtggcaccagtc
cgcgagacctgtgcccagaccctgggccacgttctaaacctgatgacgagcgacaagtgg
gactgcaactctgactcggacggtgcagctaactcctccgcaggggtgggcgtctggggt
gtgctgcgggtgctgctgcagctgctacagcgacccgaatgggaggctcgacatggcggc
ctgctgggcatcaagtacctgctggccgtacgcaaggacctgacatctgtgctgatccca
gccgtttttgagcccgtgtttcaagggctccaggaccagaatgacgatgtgagtgccgtt
gcggccgctgcgctggtgccggtcaccgaggacttggtcaagactttgccacacgaggtt
ccacgggtggtgcggacactgtgggacgccctgcttgagctggacgacctgacctcctca
acgagcagcattctcatgctgctggccgcactgctctcgcactccgcctcagttcggcca
actaaagggaccgacgctgtcggctgcttacacgacggcgagcagcagaagttggtgaac
agcgcggacgacacggcgagcacaaacaacagctgcgttgccggtgatggtgtgcccttg
gcccagtgggtgcctcgattgtggccctttctgggtcacaatgcggtcgccgtgcgactg
tcggtgctgcgttcactcctcatcctctgctcggacaaaagcgcgccactgccgctgagc
gagtggatcccgggtctgttgccgtgtatgttgcgtctgctgtaccagcgttgcctgctg
gagacgtcatctgacgtcctcgatctcatctaccaggtgtgggagaaggtggtgcgtggt
gcccctctgggtcccctgctgaccactgcctgcccctacctgagctcctggctctgcctg
ctcatgcacccagctcacctgcaggttgatgtcgtggccctgcagtggctggttcttcca
cctaacctcaagcctgacaagaggatgcggcgtcccggcagtgtcgggggctgtgggcca
ctactaccgccatgttcgaccgaaggtggtcccggtgtgaccccagtgttgggtgggggg
gaggtgtacctggcgggtgcagaatcgctgaacgagagccccgtggaacgggagcgcctg
gtcctgcagtgccgctgcatggctgccaagctgcttggcctgctgtctggttttgtgact
cgcccgatgcccggcttggaggtgccgcccgtggagagccccgtggagagctttgcccgg
ctggtgctcttccacctggcctccaagagtgccctgcagcgcatgatgaccgctgccgtc
atggcacactgggtcaccctgcacccggaggaccacctgtgcccaacatcggtacgtgac
cgtgtgctggagtgccttggggagacgctctactttgacgagatggccagcagcttcact
cgcctgcagcaggacgcgcgggacttcattgcgcttctgcgacacttccagttgcccctg
ggtgcgggattccccgcaaacgttgtgctgacagtggaccaagtgatagagctggtgacc
acagtgttccatgggctggtgcaggaggtacgcgtcaagccgaaggttctcgagaatctc
gaggagaagcgcaagtttctgctgcgcacagctcagcagatgcagaaggaccagatctca
ttaactaccagggtgcagtcttcgctggccactttcctggtgcggctggaccagttgccg
gagaagctcaacccggtcatccgtcccctgatggagtccatccgccgggaggagagcccc
ctgctacagggtgagtcggcagacagcctggtgcacctgatgggcagctgtgtggatcgt
aacccgtgcccgaatggcaagattgtgcgcaacctgctcacgtacctctgcttggacccc
agtgtcacacctgctgcagcaccaggcaccccatcggcgacaccatcaacggcaccgatt
ctcaccctggccaacatgcagaagtctgcggagagggcgccggtgcggcgctcaggttcg
gtgtcgggcggtcgcaagggatccctgcaggctgcgcagtcgattgagagcgcggatgac
tccaacagtgcggaggatgagaatgttcagcggcagaacgagatacagcgaaaaggcgct
gcccaggttttgtccttggcgaccgagcactttggggcgtccctgcccgaccgactaccc
agcctctgggaggccaccgtggagccactactccggaggggcagcactgctaacgcggca
gcgtcctcggatggtgttgtgcgcaacggcgtagctgaaccctcgagcgaggcagcactg
gccgagacgcaggagctgaccacagctctgcaggccctggaagtgattgggccacacctg
cacccagggctctactccaagttggatgccacactgccaccgctgtgtgcggccctggac
cacccgtctccagtggtgcgtcaccttgcatcccgttgctttggcatgatggcccgagtg
cggacagtgcccaccatggcgactgtggtcgacaaagttttggccaaactcggggcatcc
gatgatgacgtccagcggcggggagctgttgaagccattgcctgtgtcatcgagggcctc
tccctgggaattgtgccgtacctggtgttcctggtggtgcctgtcctggggcgaatgagc
gaccagaatgaggccgtccggctcatggccacccactgctttgccgccttggttcgcctg
atgcccctcgatagtggcgccattgacgaggcaggaggacccctgtcagctgagctgcgc
gagcgccgagcaagtgagcgccatttcttggagcagctcatgaacgcacggcacgcggac
aactacgagctgagcgtgcccatcaacgcacagctgcgctcgtaccaacaggagggcgtg
aactggttggcattcctgaacaaatacagcctacacggcatcctgtgtgacgacatgggc
ctgggcaaaacgctccagtctatctgcatactcgcctcggaccaccacaagagggagcag
ctgtacaaggagacgcagcgtgctgatgccaagcccctgccctcgctggtggtgtgccca
ccaacgctgacgggtcactgggtgtacgaggtggagaagtttgtcgacagcaagtacctg
cagccactgcactacacgggtccccccatggagcgtgcgaggctgcaggagaaggcacgc
aagcacaacctggtggtggcctcgtacgacatagtgcgcaacgacattgacttttttggc
accatccggtggaactactgcatccttgacgaggggcacatcatcaagaatggacgaact
aagctggcgcgggccctaaagcagctgcaggccaaccaccggctcatcctgacaggcacc
cccatccagaaccaggtgctcgacctgtggtccctgttcgacttcctcatgccagggttc
ctgggcaccgagcgccagtttgcgcagcgcttcagccggcccattctgcagtcacgggac
gccaagtcctcctcccgagaacaggaggccggagtgctggccatggagagcctgcaccgt
caagttctgccattcctgctgcgtagggtcaaggacgacgtcttgcaagatctgcccccc
aagatcatccaggactactactgcgagctgagtcctctacaggtgcaactgtacgaggat
tttgccagaagccgagccaagaagtcggtggacgactcggtcgcaggggctgccgaggac
cagccggtcaactcgcatgccaccgctcatgtgtttcaggctctacagtacctgcgcaag
gtgtgcaaccacccgaagctggtgttgaaccctcagcaccccgagtacggccgcatcatg
gccggtctccagcagtccgagtcttgcctctcggatatcaaccatgccgccaagctgcgc
tcgctcaggcaactgttgctggactgtggcattgggacagccgcccagcccgagcaggag
agcgtggtgcacgcccaccgggccctcatcttctgccagctcaagggcatgctcgacatc
gtcgagaaggacctgctcatggcacacatgagcagtgtcagctacctccgcctagacggc
agcgtggccccgggccagcgacaggcgctggtccagcgcttcaacgcagacccctccatc
gacgtgctgctgctgaccactcaggtcggtgggctgggactcaacctgactggcgccgac
accgtcatcttcgttgagcacgactggaacccgatgaaggacctacaggccatggatcgt
gcccatcgcattggccaaaagaaagtggtgaatgtctaccgactgatcaccaggggcacc
ctcgaagagaagatcatggggctgcagaagttcaagctgaccattgccaacacggtgatc
acgcaagagaatagcagcctcaacaccatgggcactgaccagctgctcgacttgttcacg
ctaggctcggacggtgccaaggccgacacaatgctggacaccgcgcagaactcttccgcg
ggcccatcgcgtgtcggtatgaaaggggtgctcgaaagcctccccgagctgtgggactcc
tccaagtacgactccgagtacgacctgggaaacttcctcagcacgctgaagccgaagtga
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integrated database retrieval system
