Dermacentor silvarum: 119454023
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Entry
119454023 CDS
T07348
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsv01009
]
119454023
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119454023
04131 Membrane trafficking [BR:
dsv04131
]
119454023
03036 Chromosome and associated proteins [BR:
dsv03036
]
119454023
Enzymes [BR:
dsv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119454023
Protein phosphatases and associated proteins [BR:
dsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119454023
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119454023
Membrane trafficking [BR:
dsv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119454023
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119454023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
119454023
NCBI-ProteinID:
XP_049523832
LinkDB
All DBs
Position
5:27775249..27821440
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AA seq
902 aa
AA seq
DB search
MAAVNDGGDGDHAAKSAVPFGEDTGLIYDERMAEHLSLWDSQHPERPERLTASYQRCVDY
GLVDRCFRIPARMAEEADILPLHEPALLEQLKNTHGETDADALEALCTRFDSIYIHPRTY
ELALLAAGCTKDLVTAVVQGKVRNGMALVRPPGHHAMRNEYCGYCFFNNVALAAKHAVDD
LHLKRVLIVDWDVHHGQATQYAFYEDPRVLYFSVHRYEHGEFWPELRESDFPYVGKGAGA
GYNINVPLNQVGLGDADYLAIWHQLLLPVAYEFQPELVLVSAGYDAALGCPEGLMRLSPA
TYAHLVHPLMALAGGRVCVVLEGGYCIPSLAEGVAMTLRTLLGDPCPSLPQPFGHVSDSV
TETLLNCVSVLRPHWKSLRIQGTSGTKGAVAGSSHLPRSEYRGQLGVHRPEKFPTRSGYY
EHPPEDKERLEGEVEALRSKTNLEVPPNRTALVYDERMAKHRCLDERGHPERPERILKPW
QVLERRGLLNLCLLLDSRSATVDELLLVHDKKHVQKMRSCQEMESADLIKLQEKYCSVYL
CRVSELGQLAGTLTYVFFSILVLDWDVHHGNGTQHAFYDDPRVLYLSIHRYDNGTYFPCL
PEGDFGAVGEGAGQGFNINVAWNQEGMSDGDYLTAFFQLVLPVAYAYNPELVLVSCGFDS
CVGDPLGYCRVTAEAYAQLTHLLLPLARGRVILALEGGYNLSKLPSAVCHCVSALLGQRP
PQLRSSAPCPSAVQSIRRTLGAHRSYWPCLRYSGYDLPSEEWLASNGLVPDGEPSLNMAG
LSLEDDNEEAPFCIQPETWCPHLESLPPLPPAGLCDPRSPCMTCGVRREVWTCLHCFKVF
CSRYVNGHMVTHHDETQHPLVLSYSDLSVWCYGCNFYITNPVLQAAKEDAYLKKFGTIEF
VA
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtaaatgacggaggtgacggcgatcatgccgccaagtcggcggtgcctttc
ggcgaagacacaggcttgatctacgatgaacgcatggcagagcacctcagcctgtgggac
agccagcacccagagcggcccgaacggctgacggctagctaccagcgctgcgtcgactat
ggcttggtcgaccgctgcttccgtatacccgctcgcatggctgaggaagctgatattctg
cctttgcacgaaccagcactcttggagcagctgaagaatacgcacggagaaacggatgcc
gatgctctggaggccctgtgcacgcgcttcgactcgatctacattcacccgaggacgtac
gaactggcgttgctcgcggcgggctgcaccaaggaccttgtgacagctgtcgtccaggga
aaggtacgaaatggtatggccctggttcgtccacctggccaccacgccatgcgcaacgag
tactgcggctactgtttcttcaacaatgtggccctggcggcgaagcatgcagtcgacgac
ctccacctgaaaagagttctgattgtggactgggatgtgcatcacggccaagccacccag
tacgccttctacgaggacccccgggttctgtacttctccgtgcaccgctacgaacacggt
gagttctggcccgaactgcgagagtcggacttcccttatgtgggcaagggtgctggtgca
ggctacaacataaacgtgcccctcaaccaggtgggccttggggatgccgactacctggcc
atctggcaccagttgctgcttccggtggcttacgagttccagccagagctggtgctggtc
tcggctggctatgacgccgctcttggatgccccgagggtctcatgcgattgtcaccggcc
acctacgctcacctagtccacccgctgatggccctggcaggagggcgtgtttgtgttgtg
cttgagggcggttactgcataccatccctggcagaaggcgtggcaatgaccctgcgcact
ttgttgggggacccctgcccaagcctgccgcaaccattcggccacgtcagtgacagtgtg
acagaaaccctgctgaactgcgtgtcggtgctgcgcccccactggaagagcctccgcatc
cagggcacgagcggcacgaaaggagccgttgctgggtcctcgcatctgccacgatccgag
taccgggggcagctgggcgtgcaccgccccgagaagttccccacacgcagtggctactac
gagcacccaccagaggacaaggaacggctggagggggaggtggaggcactgagatccaaa
accaacctggaagtgccaccgaaccgaaccgccctggtgtacgacgagcgtatggcgaaa
caccgttgcctggacgagaggggccacccggagcgacccgagcgcatactcaagccctgg
caggtgttggagaggcgtggactgctcaacctttgcctcttgcttgactctcggtcagcc
accgtggacgagttgctgctagttcacgacaagaagcatgtgcagaagatgcgcagctgc
caggagatggagagtgccgatctgatcaagctgcaggagaagtactgttcagtctacctc
tgccgtgtgagtgagctgggccagctagctggcacgttaacgtacgttttcttcagcata
ctggtgctggactgggacgtgcaccatggcaacggaacgcagcacgccttctacgatgac
ccccgggtgctgtacctgtcgatccaccggtacgacaatggcacatatttcccatgcctc
ccagaaggagactttggagccgttggcgaaggtgctggccaaggtttcaacatcaacgtg
gcctggaatcaagaggggatgtcggacggtgactacctgacggccttcttccaactggtg
ttgcctgttgcctatgcgtacaatcccgaactagtcctggtttcctgcggcttcgacagt
tgcgtcggggacccgctgggatactgtcgggtgacggccgaggcatacgcccagctgaca
cacctgctgctgcccttggctcgaggccgagtcatcctcgcccttgagggcggctacaac
ctgtccaagcttccttctgctgtctgccactgtgtcagcgctctcctgggacaacgtcca
cctcagctgcgatcctctgccccttgtccaagtgccgtgcagtccattaggcgaaccctg
ggagcccaccggagttactggccctgtctccgctactctggttatgacctgccatcggag
gagtggctggcatccaatggccttgtacctgatggcgagccgtcattgaacatggcaggc
ctgagccttgaggacgacaacgaggaggcgccgttctgtatccaaccagagacgtggtgc
ccacacctggaaagcctgccccctctgccaccggcgggcctgtgcgacccccgcagccct
tgcatgacatgcggggtgcgccgtgaggtctggacctgcctccactgcttcaaggtgttc
tgcagtcgctatgtcaacggccatatggtgactcaccacgacgaaacgcagcaccctctg
gtgctgagctactcggacctgtctgtctggtgctacggctgcaacttctatattacaaat
ccggtcctgcaggccgccaaagaagatgcctacctgaagaagttcggcactattgagttt
gttgcgtga
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