Dermacentor silvarum: 119455432
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Entry
119455432 CDS
T07348
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03020
RNA polymerase
dsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119455432
09124 Replication and repair
03420 Nucleotide excision repair
119455432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119455432
03400 DNA repair and recombination proteins [BR:
dsv03400
]
119455432
Enzymes [BR:
dsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119455432
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119455432
DNA repair and recombination proteins [BR:
dsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119455432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
119455432
NCBI-ProteinID:
XP_037572764
LinkDB
All DBs
Position
6:complement(38129342..38339102)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYEAEEDGFGEDESEEITPDLWQEACWIVISAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DTPQIDLQAEAQHTSGEIENPPRFLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVLKENEEAVETQHQKTFIGKIPIMLRSTYCLLNNLTDRDLSELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFQMKDSKYAYKAECRSCLEHSSRPTSTLWVNMM
ARGGQGVRKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYSKEILQKEMLPHVGVSDFCETK
KAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMAFLFRGLFRNLTKEVRMYAQ
KFIDRGKDFNLELAIKTRIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTYASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMSYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIAEATKIFVNGCWVGIHRDPDQLMNTLRKLRRQMDIIVSE
VSMVRDIRDREIRIYTDAGRICRPLLIVEDQKLLLKRRHIDNLKDREYNNYSWQDLVASG
VVEYIDTLEEETVMLSMTPDDLQDKGLAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGIYITNFHVRMDTLAHVLYYPHKPLTTTRSMEYLRFRELPAGINSIV
AILSYTGYNQEDSIIVNASAIDRGFFRSVFYRSYKDSECKRVGDQEEQFEKPTRETCQGM
RNAIYDKLDDDGIIAPGTRVSGDDVIIGKTITLPENDDDLESTNKRFTKRDASTFLRNSE
TGIVDQVMLTVNAEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGITYRQEDMPFTAEG
LTPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDSVNVQKISNLLQEYGY
HLRGNEVMFNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR
DGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRAHICNLCGLLAIANLRNNTFECKGC
RNKTQISQICLPYACKLLFQELMSMSIAPRMMVL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaagctgaagaagatggctttggcgaggatgagtccgaagagatcacacctgat
ttgtggcaggaagcttgttggattgtcatcagtgcctactttgatgaaaaaggcctggtg
cgacagcagctggattcgtttgacgagttcatccagatgtcggtccagcgcattgtggag
gacaccccacagatcgacttgcaagctgaagcgcagcacacctctggcgaaatagagaat
ccgcctcgctttctactgaagttcgagcaaatctacctttcaaagccaactcattgggaa
aaggatggagcacctagtcccatgatgccaaatgaggctcggctgcgcaacttaacgtac
tcggcaccactttatgtggacattaccaaaacagtgctcaaagaaaacgaggaagctgtg
gagacgcagcaccagaagactttcattggcaagattccaataatgcttcgctccacatat
tgccttcttaacaacctgactgaccgtgacttgagtgaactgaatgagtgccccctggat
cctgggggctacttcatcatcaatggctctgagaaggtactgattgcacaggaaaagatg
gcaaccaatacagtgtatgtatttcaaatgaaagattctaaatatgcctacaaggctgag
tgccgctcttgccttgagcactcatcccgacccaccagcaccctctgggtcaacatgatg
gccaggggaggccagggagttcgcaagagtgccatcggccagaggattatagccatattg
ccctacatcaagcaagagattcccataatgatagtgtttcgagcacttggctttgtggct
gatcgtgacatactggaacacatcatctatgactttgaagatcccgagatgatggaaatg
gtcaagccttctttagacgaagcctttgtgattcaggagcaaaatgtcgctctgaacttc
attggttcacgtggagcacgcccaggtgtcaccaaggagaagcgtatcaaatattccaag
gaaatcctgcagaaagaaatgctgccccatgttggtgtgagcgacttttgtgagacaaaa
aaggcttactacctcggttacatggttcaccggctgctgcttgctgctctgggacgaaga
gagctagatgaccgtgatcactacggcaacaagcgcctagatttagctggtcccctaatg
gctttcctgtttcggggtcttttccgtaatctcactaaggaggtacgcatgtatgctcag
aagttcatagaccgtggcaaggactttaaccttgaattggctatcaagacccgtatcata
actgacggactccgctactccctggcaacaggaaactggggtgaccaaaagaaggcacat
caagcacgtgctggagtgtctcaggtgctcaatcgcctaacctatgcttcaacgttgtca
catcttcggcgtgtcaactctcccattggtcgagatggcaaacttgccaagccccgtcaa
ctccataacacactgtggggtatgatctgccctgctgaaacaccagaaggccatgctgta
ggcctggtgaagaatctagctctcatgtcctatatttctgtaggctcacagccttcaccc
atcctcgagttcttggaggaatggagcatggagaacttggaagagatagcgccctcagcc
attgcagaagctacaaaaatctttgtcaatggctgctgggtgggcattcacagggaccca
gaccaattgatgaacaccctccgcaagctgcgccgacagatggacatcattgtgtcagaa
gtctcaatggtgcgagacattagagaccgggaaattcggatctatacagatgcgggccgc
atctgccggcctctcctcattgttgaagaccagaaacttctgctcaagcgacgccacatt
gacaacctcaaggatcgcgagtacaacaactacagttggcaagacttggtggcgagtgga
gtggttgagtacatcgacacacttgaggaagagacggttatgctgtctatgacccctgat
gacctgcaggacaaaggacttgcatattgttctacctacacacattgtgaaatccaccca
tccatgattcttggtgtgtgcgcctcgattatcccctttcctgaccacaaccagtcgcca
cgtaacacataccagtctgccatggggaagcaagctatgggcatctacatcacaaacttt
catgtgcgcatggacacccttgcccatgtgctctactatccccacaagccactgaccaca
acacgctcaatggagtaccttcgtttccgtgagctgccagctggcatcaactccattgtg
gctattttgtcatacacaggatacaaccaggaggactccatcattgtcaatgcctcggca
atcgaccggggatttttcaggtcagtgttttatcggtcatacaaggattctgaatgcaag
cgggtcggagaccaggaagaacagttcgagaagccaacacgagagacctgccagggcatg
cgaaatgccatttatgacaagctagatgacgacggcatcatagcacctggtaccagggtg
tctggagacgatgtcattattgggaagaccatcaccctgccggaaaatgacgatgatctg
gagagtaccaacaagcgattcaccaagcgtgatgccagcacattcttgcggaacagtgag
acgggcattgtggaccaggtgatgttgactgtgaatgcagaaggttacaagttctgcaag
attcgtgtgcgctccgtgcgcatcccacagattggcgacaagtttgccagccggcacggc
cagaaaggcacttgtggtatcacctatcggcaagaggacatgccctttacagctgaaggc
ctgacaccagatatcatcattaatccccatgccatcccttctcgtatgaccatcggccat
cttattgagtgcctgcaaggcaaggtctccgccaacaagggtgaaatcggtgatgctacg
ccttttaatgattctgtcaacgtgcagaagatctccaacctccttcaggagtatggctac
cacctaagaggaaatgaggtgatgttcaatggacacacaggccgaaaaattaatgcacag
atcttcttgggacctacttactatcagcgactgaagcacatggtggatgacaagatccac
tcccgagctcgaggtcctgtccagattctcgtgcggcaacctatggagggaagggctaga
gatggtggcctgcgttttggtgagatggagcgggactgccagatctcgcatggagcagcc
cagtttctgcgtgaacggctgtttgaagtgtcggatccataccgagcacacatctgcaac
ctctgtggcctgctggccattgctaacctgcgcaacaacacctttgaatgcaagggctgc
cgaaacaagacacagatatcccagatttgcctgccttatgcctgcaagctgttgttccaa
gaacttatgtctatgtccatagcaccacgaatgatggttttgtga
DBGET
integrated database retrieval system
