Dermacentor silvarum: 119455837
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Entry
119455837 CDS
T07348
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dsv
Dermacentor silvarum
Pathway
dsv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119455837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119455837
03036 Chromosome and associated proteins [BR:
dsv03036
]
119455837
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119455837
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119455837
PBAF complex
119455837
GBAF(ncBAF) complex
119455837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SCHIP-1_C
Motif
Other DBs
NCBI-GeneID:
119455837
NCBI-ProteinID:
XP_037573247
LinkDB
All DBs
Position
6:108891083..108966755
Genome browser
AA seq
991 aa
AA seq
DB search
MEFLTQVNAKWLVDLDEYNEWMNEEDYEVETDAMGRRRSPRGKYTLDELLSGEGEKRDRK
GIKKRKRSPSPPLDKRKRKGGRSPAMGKKRSFRDDESDDLTKDMEEPSPEPSLQEVSIPR
SNPNQRSSKDSELQPVKGGTLIDLDGADMDDKGDRDKGSRPGSPNGVGKSEKAEAHDDNV
TEQANHIIIPSYAAWFDYNSIHAIERRALPEFFNAKNKSKTPEVYIAYRNFMIDTYRLNP
TEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDAESRPSPMGPPSTSHFHVLADT
PSGLQPLNPPRTQQPSAAQQMLNLDKAKEEGGTGKDEGGGIPARGGSANATTTIGGDALG
LKMDQYAKKQAYLRHKAAATVSREWTEQETLLLLEALEMYREDWNKVCEHVGSRTQDECI
LHFLRLPIEDPYLDDPAAGGGALGPLAFQPIPFSKAGNPIMSTVAFLASVVDPRVASSAA
KAAMEEFAKIKDEVPSALLDAHIKNVETAAAEGNLNPKAGLGMTGIAGTGDKEPQESTAE
QSTGEESEKAEEGKEGTEPSLSAAEVKLEKPSSSEENSSASAEGAPTAASSTGAAATPSG
AGESEDKAKAAKLAEEPSKESPAAPDQESTEEPKAPETDRDRLVKDAQLSTAAAAALGAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELEAIMDRERETLEYQRQQLIQ
ERQQFHLEQLRAAEFRARQQAHAMMMAQQGGAATQPTAAPAAPGAPPAAPPPTAAGGGGP
TPDGGGDPGQHPPRAGSGPPLPSPHPQQQPQQPQLPPQQQRSPYYPGYGSAPPPVGGPRP
YPPAGGGPPGGYGGPAPYPQPSGEQAFRVPLGGSPQPGGAGGVRSPGLMHPSAAPPPTSS
MGQPLPSAGAPPMPSMNGGPVVPPGTPSPMEQGTPPQQPQPPPQPHSQCPPGVAPSPGSG
NVPVPPSAECEPAAASGDPGAGSSAPTPPGL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcttactcaggtcaatgccaaatggctcgtcgatttggatgagtacaacgaa
tggatgaatgaagaagattatgaggtcgagacagatgctatgggccgcaggcggtctccc
aggggaaagtacactttggatgagctgctctctggagaaggagagaaacgcgaccgaaaa
ggcatcaagaaacgaaagaggtctccgtcccctcccctggacaagcggaagcgcaaggga
gggcgcagcccggccatgggtaaaaaacgctcattccgcgacgacgaatccgacgacctg
actaaagacatggaggagccctcccccgagcccagtcttcaggaggtctccattccccga
agcaacccaaatcaacgtagcagcaaggacagtgagctgcagccagtcaaaggaggcacc
ctcatagacctggatggggctgacatggacgacaagggtgacagagacaagggctcccga
ccaggcagcccgaatggtgtgggcaagagcgagaaagctgaagctcacgacgacaacgtc
actgagcaggccaaccacatcatcatccctagctatgcagcttggtttgactacaacagt
attcatgcaattgaaaggcgggccctgccagagttcttcaatgccaagaacaagtccaag
actcctgaagtctacattgcatatcgcaacttcatgatcgacacataccggctcaatcca
acggagtacctgacagtgactgcatgccggaggaatctggcgggagacgtgtgcgccatc
atgagggttcatgcattcctggagcagtggggcctggtgaactaccaggtggatgcggag
agccgcccgagccccatgggtcccccatcaacgtcgcacttccacgtgctggctgacacc
ccctcgggactgcagccgctcaaccctcccaggactcaacagccttcagcagcgcagcag
atgctgaacctggataaggccaaggaggagggtggcaccggcaaggacgaaggagggggc
atcccggcccgtggaggctctgcgaacgccacaacgaccatcggtggcgacgctctgggc
ctcaagatggaccagtatgccaagaaacaggcatacctgcgccacaaggcggctgcaacg
gtgtcgcgtgagtggactgagcaggagaccctgctgctgctggaggcccttgagatgtac
cgcgaggactggaacaaggtgtgcgagcacgtgggcagtcgcacccaggacgagtgcatc
ctgcacttcctcaggctgcccattgaggatccctacctggacgaccccgccgcgggaggg
ggtgccctggggcccctggctttccagccgattcctttctccaaggcgggcaatcccatc
atgtccactgtggccttcctggcttcagtggtcgaccctcgggtggcctcttcggcagcc
aaggcagcaatggaggagtttgccaagatcaaggatgaggttccctcagctctcctggac
gcacacatcaagaatgtcgagactgcagcagcagagggcaatctcaaccctaaggcaggc
ctgggcatgacaggcatcgcaggcacgggcgacaaggagccacaggagagcacggccgag
cagtctactggagaggaatcagaaaaggcagaagaaggcaaggaaggaacagagccctcg
ctctctgcagctgaggtcaagctggaaaagccgagcagctctgaggaaaactcctctgcc
tcagctgaaggagccccgactgctgccagcagcaccggagctgcggccaccccctccgga
gcaggggagtccgaggacaaagcgaaagcagccaagcttgctgaggagccttccaaggaa
agccccgctgcgcccgaccaggagtccacagaggagcccaaggcacccgagacagaccgc
gaccggcttgtcaaagatgcacaactttccacggcggccgcagctgctctgggtgcagcg
gctgtcaaggcaaagcacctggcagctgtggaagagcgcaagatcaagtccctcgtggcg
cttctggttgaaacgcaaatgaaaaagctggagataaagctgcgacacttcgaggaactg
gaagctattatggatcgtgagagggaaacgctggagtaccagcggcagcagctgatccag
gagcggcagcagttccaccttgagcagctgcgagcagctgagttccgggctcggcaacag
gcacacgccatgatgatggctcagcagggtggtgctgcaacacagcccacggcagcccct
gcagccccgggggctccacccgcagctccgccacctacagcagcaggaggagggggccct
acaccagacggaggaggagacccaggtcagcacccgccacgagctggcagtggccctccc
ctaccttccccacacccacagcagcagccacagcagccgcagttaccgccacagcagcag
cgtagcccttactacccaggctacgggtctgctccacctccagtgggcgggccgcgacca
tacccgcctgctgggggtgggcccccgggcggttacgggggccccgctccctacccacag
cccagtggtgagcaggcattcagagtaccccttggcggcagcccccagccagggggagcg
ggtggtgtgcgaagtcctggcttgatgcacccgtctgcagcacctcctcccacctcttcc
atggggcagccgctcccctcagctggagcaccacccatgccctccatgaatgggggtcca
gtggttccccccggcactccgtcccccatggagcaagggacccccccacagcagccacag
ccaccaccacagccccacagtcagtgtccgcctggtgtggctccgagcccaggttctgga
aacgtgcctgttcctccctcagccgaatgcgagcccgcagcagcgagtggagacccagga
gctggctcgagtgctccaactccccctggactgtga
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