Dermacentor silvarum: 119455880
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Entry
119455880 CDS
T07348
Name
(RefSeq) ATP-dependent RNA helicase me31b isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119455880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119455880
03036 Chromosome and associated proteins [BR:
dsv03036
]
119455880
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119455880
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119455880
mRNA degradation factors
5'-3' decay
Decapping complex
119455880
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119455880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119455880
NCBI-ProteinID:
XP_037573322
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All DBs
Position
6:115778083..115801655
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AA seq
442 aa
AA seq
DB search
MSTVAENSGNHSPEKAVNHTNNIRDVEEGGWKTKLVLPPRDLRKRTSDVTDTKGNEFEDF
CLKRELLMGIFEKGWEKPSPIQEASIPIALLGRDILARAKNGTGKTGAYIIPMLQRIDVT
KDHIQAMAIVPTRELALQTSQICIELSKHLKARVMVTTGGTNLKDDIMRIYENVHVIIAT
PGRILDLMEKRVAQMDKCNMLILDEADKLLSQDFKGLLDKVISYLPPDRQILLYSATFPL
TVEQFMKKHLHSPYEINLMDELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCN
STQRVELLAKKITELGYSCYYIHAKMSQQHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQA
VNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYDDRFSLHRIEQELGTEIKPIPK
VIDKNLYVAELQLEDAEANASK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagtagcagaaaactccggcaaccattcccctgagaaggctgtaaaccacacc
aacaacattagggatgtcgaagaaggtggctggaaaacgaagcttgtcttacctccccgt
gatctaaggaagagaacatctgatgtcactgacaccaagggcaacgaatttgaggacttc
tgcctaaagcgggagctgcttatgggcatctttgagaagggttgggaaaagccctctccc
atccaggaagccagcatccccattgcgctcctagggcgcgacattctggctcgggccaaa
aatggcactggcaagacgggtgcatacatcatccccatgctccagcggatagacgtgaca
aaggatcacatccaagctatggccattgtccccactcgtgagctggccctccaaaccagt
caaatctgcatcgagctgtctaagcacctgaaggcccgggtcatggttacaactggtggc
accaacctgaaggatgacatcatgcgcatctacgaaaatgttcacgtgatcattgcgaca
cctggccgcattttggatctcatggaaaaaagagtagcgcagatggacaagtgcaacatg
ctcattttagatgaggcagacaagcttctctcccaggacttcaagggcttgctggacaag
gtcatcagctacctgccccctgacaggcagattcttctctactctgccacgttcccactc
acggtggagcagtttatgaagaagcacttgcacagcccgtatgagattaacctgatggat
gagctgaccctgaaaggtgtgacgcagtactacgctttcgtccaggaaaggcaaaaggtt
cactgcctcaacacgctcttctctaagctgcaaatcaaccagtcaatcatcttctgcaac
tccactcagcgggtggagcttctcgccaagaagataacggagcttggctactcgtgctac
tacattcatgccaagatgtcccagcaacatcgtaaccgtgtgttccatgacttccgcgct
ggcctctgcaggaaccttgtctgctctgacctcttcacaagaggtatagacattcaggct
gtgaatgtggtcatcaacttcgacttcccaaggatggcagagacatatctgcaccgcatc
ggcagatccgggcgctttggccaccttggcattgccatcaacctgatcacctacgatgac
cgcttctcgctgcaccgcatagagcaggagctggggacggaaatcaagcctattcctaag
gtcattgacaagaacctctacgtggcagagctgcagctagaagatgcagaagcaaatgcc
agcaaatag
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