Dermacentor silvarum: 119456433
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Entry
119456433 CDS
T07348
Name
(RefSeq) WD40 repeat-containing protein SMU1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsv03041
]
119456433
Spliceosome [BR:
dsv03041
]
Complex B
Other components
Complex B specific factors
119456433
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
LisH_TPL
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_Nup120_160
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_IP5PC_F
PROPPIN
VPS8_N
DUF7165
DUF7899
Motif
Other DBs
NCBI-GeneID:
119456433
NCBI-ProteinID:
XP_037574097
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Position
6:complement(176018223..176056206)
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AA seq
521 aa
AA seq
DB search
MAIEIESADVVRLIQQYLKESNLYRTLQVLQEETSISLNTVDSVDSFVQDIHSGHWDTVL
KVVQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIKLKQEEPERYIHLENQ
LARSYFDPQEAYPSGSSKERRRAAIAQALSGEVSVVPPSRLLALLGQALKWQQHQGLLPP
GTTLDLFRGRAALRGGQQEEERFPTQISRTMRFGPKAHVECARFSPDGQFLVTGSVDGFI
EVWNFTTGKIRRDLKYQAQDNFMMMDDAVICICFSRDSEMLASGGQDGKIKVWKIQTGQC
LRRFERAHSKGVTCLSFSRDSSQLLSASFDQTIRIHGLKSGKLLKEFRGHTSFVNDVIFT
PESHHLLSASSDGTVKLWSVKSTECLSTFKSLGAAGGMAGAMGSDITVNSIHALPKNPEH
FVVCNRSNTVSIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDHVLYCFSTV
SGTLDRTLTVHEKDVIGVCHHPHQNLIATYSEDGHLKLWKP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgaaatcgagtcagcggacgtcgttcgcctcatacagcagtacttgaaggag
agcaacctctatcggactctccaagtgttacaggaagaaacgtccatatccctgaacaca
gtcgacagcgtcgacagctttgtccaagacatccacagtggccactgggacactgttctc
aaggttgttcaatcactgaagctaccggacaaaaagctcattgatttatatgagcaggtg
gtgttagagctgattgaactgcgtgaacttggcgcagctcggtccctcttgaggcaaaca
gatcccatgatcaagctgaagcaagaggagccggaaagatacatccacctggaaaaccag
ttggcacgttcctactttgacccacaagaggcataccccagtgggagcagtaaagagcgc
cggcgggcagcaatagcgcaggccctgtcaggagaggtgagcgtggtgcccccctcacgt
ctcctggcactactcggccaggcgctcaagtggcagcaacaccagggtcttctgcctccc
gggaccaccctcgacctattccggggcagagctgccctgagggggggccaacaggaggag
gagcgcttccccacacagatttcgcgcacaatgcgcttcggccccaaggcccacgtagag
tgcgcccgtttctcgcctgatgggcagtttctggtcacaggctccgtggatgggttcatc
gaggtgtggaacttcaccactggaaagatccgcagagatctcaagtaccaagcacaggac
aatttcatgatgatggacgatgctgtgatttgcatctgcttcagcagggattctgaaatg
ctggcttctggagggcaggatggcaaaatcaaggtgtggaagatccagacgggccagtgc
ctgcggcgctttgagcgtgcccattccaagggtgtcacctgcctcagcttttctcgggac
agcagtcagctgctcagtgcctcctttgaccagaccattaggatccacggcctaaagtct
gggaagctgctaaaggagttccgtggccacacctcatttgtgaacgatgtcatcttcaca
cctgaaagccaccacctgctcagtgccagctcggatggcacggtcaaactgtggagtgtc
aagagcaccgagtgcttgagcaccttcaagtcccttggtgcagctggtggcatggctggt
gcaatgggtagtgacatcactgtgaactcaatccatgctctgcccaagaatcctgagcac
tttgtcgtctgcaaccgttcaaacacagtctccattatgaacatgcagggacagattgtg
cgaagcttctccagtggaaagagggaaggtggcgacttcgtctgttgcactctgtcgcca
aggggagaatggatctactgtgtgggcgaggaccacgttctgtactgcttttccacagtc
tccggcacacttgaccggacgcttacggttcacgaaaaagacgtcattggcgtctgtcat
catcctcaccagaacctcattgcaacatacagtgaagatggtcatctcaagctgtggaag
ccataa
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