Dermacentor silvarum: 119457589
Help
Entry
119457589 CDS
T07348
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dsv
Dermacentor silvarum
Pathway
dsv04137
Mitophagy - animal
dsv04140
Autophagy - animal
dsv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119457589
04137 Mitophagy - animal
119457589
04148 Efferocytosis
119457589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsv03000
]
119457589
Transcription factors [BR:
dsv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119457589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
PAS_4
HIF-1a_CTAD
HLH
HIF-1
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
119457589
NCBI-ProteinID:
XP_049526214
LinkDB
All DBs
Position
7:complement(15339697..15562139)
Genome browser
AA seq
878 aa
AA seq
DB search
MSAAKAASAPKERRKNSEKRKEKSRDAARCRRSKESEIFTELSQQLPLPENVACQLDKAS
VMRLAISYLRLREILDPIAEVARSAGCSPYDSSVLEALDAVLLVLSTDGEIVYLSDSVGR
HLGLNQVDLMGQSVFDFCHPCDHDELKDALLSKPEHVHDVSPQPCHFLMRLRCTLGSKGR
GVSVKSASSYKMMQCVGTRVLREVIPKPCPDEDLASPLPGTVVTKEEEEVTTSSPAPHLP
IRVIIHERRHFLVCVAQPIPHPSNIEAPLGSHTFLSRHNPGMCFTHVDERTETFLGYTSD
ELLGKSVYSYFDPRDVLHLQQDFKTLFAKGQCETGQYRFLAKNGGCVWVLTQATLIYENN
SCSKPQCVVCVNYVLSGASQGHEVLAEQQLTPTVQPEPEPEPELQPLPSAPVAEAAAEEE
EEEEGEEEEEEPLCFTSSTSKIFAPLTADMNKDFLLFPDEDSDSTVLKDDDDDLTHLAPT
AGDTIIPLEVEGLPSDVLCDSYPLPDIYGDGNKLLPDYVMLTTDENCPLGRKDPFLSYRD
DSDPLSSPGSCGTPPSSDGEGRSSSCSDVPSLESPVDRFAGLDLKPERHIEVPVDDFEMR
APYIPMNGDDFPLLTADSVMWGPQDSPPGSSSSRSSLCSSPTFFATSPPPPRPTLGSLGP
NPKSSLAALLISELPPPTTARSREWTKHRARTNHPRSLGVCGPPRQDLARSSRLTHPHQQ
QQTAIRSHLTRGLSAATDVRHHAYVTTALEQKMGMPSPPDPPPKRSSTERALGAGQLASP
KRMRVDLRGLQLQNKDSVLLNLLVNGEDACHGYLCQTLRYDKRCPPSSPRPAPLLLDEPI
PTLQDLSQLDAEVNAPIQQLLTGEDLLSALDQSVPALV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgccaaagcggcaagcgctcccaaggagcgacgcaaaaattctgaaaaacgg
aaagagaagtcacgggatgcagcgaggtgccggcgcagtaaagagtcagagatcttcact
gagctgtcacaacagctgccgcttccagagaatgtggcctgccagctggacaaagcctcg
gtcatgcgtctggccatcagctacttgcgactacgtgagatccttgatccaatagctgaa
gtggccagatcagcaggctgcagtccttacgattcatcagttctggaggccctggatgct
gtcctgctggttttgtcaactgatggagagattgtctacctctcggacagtgtaggacgt
cacctcggtctcaatcaggttgacttgatgggtcagagtgtcttcgacttctgccatccc
tgcgaccatgacgaactaaaggatgccctgctgtccaaacccgagcacgtgcacgacgtg
tcccctcagccttgccatttcctcatgcgcctgcgctgcacactgggcagcaagggccgt
ggagtcagcgtcaagtcggcctcttcgtacaagatgatgcaatgtgtgggtacacgtgtc
ctgcgcgaggtgatccccaagccttgtcctgacgaagatctggcgtcgccgctgccagga
acggtggtgaccaaggaagaggaagaggtgaccacctcatcacccgcgccgcatctgccg
atccgcgtcatcatccacgagcggaggcatttcctggtgtgtgtggcccagcccatcccg
cacccgtccaatatcgaggcgcccctgggctcacacacattcctcagccggcacaaccca
ggcatgtgcttcacacatgtcgacgaaagaacggagacattcctgggctatacatctgac
gaactgcttgggaagtccgtctactcctactttgacccaagggatgttctacacctgcaa
caggacttcaaaacattgttcgccaaaggccagtgcgagacaggccagtaccgcttcctg
gccaagaatggtggctgcgtgtgggtgctgacccaggcgacccttatctacgagaacaac
agctgcagcaagccacaatgcgtcgtctgcgtcaattatgtgctgagtggtgccagccag
gggcatgaagtgcttgcggagcagcaactgactcccacagtgcagccggagccagagcca
gagcccgagttgcagccactgccgtctgcccctgtggctgaagcagcagcagaggaagag
gaggaagaagaaggggaggaggaggaggaggagcccctgtgcttcaccagcagcacgagc
aagatctttgctcccctcacagcggacatgaataaggatttcctcttgttccctgatgag
gacagcgactccacagtgctgaaagatgacgacgatgacctgactcacttggcaccaacg
gctggtgacacaatcattccattggaggtggagggtctgccttctgatgtgctttgcgac
tcgtatcccctgccggacatctatggcgacggcaacaaactgttgccagactacgtcatg
cttactaccgacgaaaactgcccactgggtcggaaggatcccttcctcagttaccgggac
gacagcgacccactgtcatcaccaggatcatgtggcacaccaccttcttcagacggcgaa
gggcgcagcagcagttgctcggacgttcccagccttgaaagtcccgtggatcggtttgca
ggtctcgacctaaaaccagagaggcatatagaagtcccggtggatgactttgagatgcga
gcaccgtacatccctatgaatggagatgacttccccctgctcactgccgactcggtcatg
tgggggccccaggattcgcctccgggaagctcgtccagtcggagctctctctgtagcagc
ccgacattcttcgccacctcaccacctcctccgaggccaacgttagggtccctgggaccc
aacccaaagtccagcctggctgcccttctgatatctgaactcccgccacctactacagcg
aggtcacgggagtggactaagcatcgagcacgaacgaaccatcccaggtcattaggagtc
tgtggaccgccgcggcaagacttggcgaggtcatcacggttaacacatccacaccagcag
cagcaaacagcaatacgaagtcacttgacacgtggtctgtctgcggcgactgacgtgcga
catcatgcatatgtgacaacagcgctggagcagaaaatggggatgccttcccccccggac
ccaccgccaaagcgatcctctacggagcgggccctgggggctggacagctggccagcccc
aagaggatgcgggtcgacctgcgaggcttgcagctccagaacaaagacagcgtgctgctg
aacttgctggtaaatggagaagacgcctgccatggatacctgtgccaaaccttgcgctat
gacaagaggtgcccaccgtcgtctccacgtcccgctcctctcctgcttgacgagccaatc
ccaacactgcaggacctgagccagctggatgctgaggtcaacgccccaatccagcagctg
cttactggcgaggacttactcagtgccctcgaccagtcggtgcctgcgctcgtctga
DBGET
integrated database retrieval system
