Dermacentor silvarum: 119457988
Help
Entry
119457988 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dcr-1-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsv03036
]
119457988
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119457988
microRNA pathway
RISC loading complex
119457988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Ribonuclease_3
Dicer_dsRBD
Dicer_dimer
Ribonucleas_3_3
PAZ
Helicase_C
Dicer_PBD
dsrm
ATF7IP_BD
Motif
Other DBs
NCBI-GeneID:
119457988
NCBI-ProteinID:
XP_049526560
LinkDB
All DBs
Position
7:complement(45682415..45727852)
Genome browser
AA seq
2158 aa
AA seq
DB search
MTRNGAWLADVSRRFGTESPCDSPKMVVKRPGVGDAPQPRQRRHHFLENVQTKTFTPLEY
QVELLDTAKQQNSIVFLSSGKTFMVVMLVKELAYQVRPSFAAGGKRVLILVPSAESGVRH
QKMMEDYTDLKSIFVGDPTGKTDERVDFPKLFRDHHVLVMTAGAFTCHLVNADADIAEEL
VDHLNLVVFDECNQALRHIEFEPVLSFVMDYVLEGRLSVLGLAAPLATKKRQRPSLLEAE
ILELEDGFQSVACTSSELTVVSKYGSRPREVVVEYAVYGCSSSDGESAKNLETALRLLDE
AMEFLGGTEGQLDERTKASLRQSQRYLVELCYMLVTLGPWCAREVADLFLKEVSQAVDSL
GPAVSWSRMALLVVHTVIQQVARLTEALATDLEPSDAVHQPAKFRHLLRILREYRPQQQP
QQQPQQQPQQQQGTITNSHVGQDNCVALQNSIKECESSTEETGKPTMVDSSVQPATAPTS
ASDAESVVQNSEGSVTALSDDIERLSISSPDKKAPVTGDATPSAATDVIVTALSSAPEVG
ASGSVSVTGPLTPAVSTSVGVPLRTMGHRADLVDDPNALCGIVFVRQRITAYILSMWLSK
LATRCPSEYGFITPNFLVGRTAPSALGEASSNRSDGSLRSLPNTLTPLGIQRQEEVLQKF
RSRECNLLVATSVVEEGIEVPRCNLVVRFDPPENFRAYVQSKGKAKAAGSRYFVLVPDDE
SGRFLGDLHDYRTTEQILLERSHVEDTTIDEEVDAAYADSLKPAYKPLEAEDAPRVTMST
AIALVNRYCAKLPSDTFTRLTPISSMAEVETEGSEETLYSCSLRLPINSPLRRCIVGDPM
PSKLLAKQAAALKTCEELHRMGELDDNLVPQGKEAMRMALDQGSAGRFPEEDIQPGGPRP
GTTKRRQYYDKKVSEVLKGQRVDENDEFHLYAFGMKLTCPIPEEQNTRGRKIHDPADTAR
GFGLVTSRRIPLICSFPVFTRSGEVTVELEHISSDIGPLSPKQVRDLTTFHRYTFTNVLR
LEKYPMTFNPEGDACSFLVVPINAVKTTDDQPGSTTIDWQFVERICEEEKFMPRRVXEEE
RELFVFKEEDYLDTVVTPWYRNLDKPQFFYVAEICHDLNPLSDFPDAGFDTFDAYYREKY
QIRVVDGRQPLLDVDHTSARLNLLTPRYVNRKGVTLPTSSEQTKRAKRESLQQKQILVPE
LCAIHPFPASLWRKAVCLPCILYRMNSLLLAEQLRLTVAREVQVGRLELPKDFKWPTLDF
GWTLADVLQKAQEAAKAEEERATELMERTGIQPVRISPPPAMNAWRAPAPYQPPMFQQDQ
ELVIDTFDPSKVHIPDDDQLDQLADAEVSALNLGGPTGPNFDWKPLPKLPGEPTPVPRIR
YGSPSNFEAEGWDSEWDTDMEDSSFVTLDMPGLGYISAPGVFNMQGLSLDLASCRDDDIW
DSFDEDEEDPELDFSRSEWNQSPSEAGGNEDEGHLLKISDKSENKDDEKRPEEKLDWLSH
CSKDQRSKSANAFVDEPEEEQREVDPFVEEKVAALREECVKKLEVWRCNEDEAKLAARKT
IYKSFRRVAEALKLIAEYEDDRPLKKDEPLAPAVRDSGATTTGGEAPKAPEGSVLPFGEL
LPDRDSVKPGGGDASQVRFDERPDLDSHCGPSPSILLQALTMSNANDGINLERLETVGDS
FLKYAVTAHLYCTYPSVHEGKLSHLRSRQISNLNLYRLGRARNLGGLMVATKFEPSDNWL
PPGYIVPPGLERALIESGLPAGHWNIAALTGLTQMDEAQIRQTLAERSNKVRNLDEVLAD
EQTLDTAPYVPYNLLTQHSIPDKSIADCVEALIGAYLVSCGPHATLLFMSWLGLDVLPKN
CTAETLPNFGVMLYGTLEPPLVVPDAGPQLDELLSGYDAFEARIGYRFRDRAYLLQAFTH
ASYHYNRLTDCYQRLEFLGDAVLDYLITRHLYDDPQRHSPGTLTDLRSALVNNTFFASLA
VKYDFHRYFKNVSPGLFAVIQRFVEMKRLNNGLGYHEEYYLEEEECEEAEEVEVPKALGD
IFESVAGAIFLDSNMSLDTVWQVYYAMMKPEIEYFSTHVPKSPIRELLELEPQTAKFERA
EMTLNGKVRIRVEVFGKGRFVGVGRNKRIAKCTAAKRALRALKRMRQEGGSTNVHGTF
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaaatggggcttggctagcagacgtgtctcgaagattcggtacagaatcgccc
tgcgactcgcccaagatggttgtgaagagacccggcgtcggcgatgcgccgcaaccgagg
caacgtcggcaccacttcctcgaaaacgtgcaaaccaagacgttcacgcccttggaatac
caggtggaactgctggacaccgcaaagcagcagaattccatcgtgttcctgtcgtcgggc
aagaccttcatggtggtaatgctggtcaaggaactagcctaccaggttcggccaagcttt
gctgccggtggcaagcgagtgctaattctggttccgtcagccgagtccggtgtgcggcac
cagaagatgatggaggactacaccgacctcaagtccatctttgtcggcgatcccaccggc
aagaccgacgagcgcgtcgacttcccgaaactgttccgcgaccaccacgtcctcgtgatg
acggccggcgccttcacctgccatttggtcaacgcggatgcagacatcgccgaagagctc
gtcgaccacttgaaccttgttgtcttcgacgagtgcaaccaagcgctgcgccacattgag
tttgagcccgtgctgagctttgtcatggactacgtcctcgagggccggctaagcgtgctg
gggcttgcagcgccactcgcgacgaagaagagacaacgaccctctttgctcgaggccgag
atcctcgaactcgaggacggcttccagagcgtcgcgtgcacttctagcgagctgacggtc
gtcagcaagtacggcagccggcccagggaagtggtcgtcgagtacgctgtgtacggctgc
agcagcagtgacggggagtctgcgaagaacctggagacggcgctaaggctgctggacgaa
gcgatggagttcctgggcggcacggagggtcagctggacgagcggaccaaggcttcgctg
cgccagtcacagcgttacctcgtcgagctgtgctacatgctcgtcaccctggggccgtgg
tgtgcccgagaggtggctgacctgtttctcaaggaggtgtcccaagcggtggacagcctg
ggtcccgccgtgagctggtcacgcatggcgctcctggttgtccacacggtgatccagcaa
gttgctcggctcaccgaggccttggctacggatctcgagccgagtgatgctgtccaccag
ccggccaagttcaggcacctgctgcggatactgcgagagtacaggccgcagcaacagccg
cagcaacagccacagcagcagccacagcagcagcaaggtaccattaccaactcgcatgtt
ggacaggacaactgtgtagctttacaaaattccatcaaggaatgtgagtcatcgacagag
gaaacaggcaaaccgaccatggtggattcttccgtccagcccgcgacagctccgacttca
gccagtgatgcggaaagtgttgtgcaaaattcagaaggctccgtcaccgcattgtccgac
gacatcgaaagactgtccatttcatcgccagacaagaaagctcccgtaactggcgacgcc
acgccatccgctgcaacagacgtaatagtcaccgcgttgtcgtctgctcccgaagttggt
gcgtctggtagcgtgtcagtgacaggtccgttgacacccgcagtgtcaaccagtgttggt
gtgccacttcgaaccatgggccaccgtgccgacctagtcgacgacccaaacgcgttgtgc
ggcattgtgtttgtgcgacagaggatcaccgcctacatcctgagcatgtggctctcgaag
ctggcgacgcggtgcccgagcgagtacggtttcatcacccccaactttctggtgggaagg
actgctccgtcggcgctcggagaggcaagctcaaatcgtagcgacggtagtctgcggagt
ttgccaaacacgctgactcccctgggcattcagcgacaggaggaagtgcttcagaagttc
cggtcacgagagtgcaatttgttggtggccacaagtgtagtggaagaagggatcgaggtc
ccccgttgcaacctggtggtgcgctttgatccgcccgagaacttccgggcctacgtgcag
tccaagggcaaggccaaggccgccgggtcgcgctacttcgtcctggtgcccgacgacgag
agcggccgctttctgggtgacctgcatgactaccggaccaccgagcagattcttttggaa
cgcagccacgtggaggacaccacgatagatgaagaagtcgacgcagcctacgcggacagc
ctgaagccagcttacaagccgctggaggctgaagatgccccgagggtcaccatgtccact
gccattgccttggtcaacagatactgcgccaagctgcctagcgatacgttcacgaggtta
acgcctatcagcagcatggcggaggtcgagacggaaggctcggaggagaccctctacagc
tgttcgctgcggctgcccatcaattctcccctcaggcggtgcatcgtgggtgacccaatg
ccaagcaagcttttggcaaagcaggcggcagcactgaagacgtgtgaagagctgcacaga
atgggcgaactcgacgacaacctggttccacaggggaaggaagccatgcggatggcactt
gaccaagggtcggcgggtcgctttcccgaggaggacattcagcctggtggaccacggccc
ggtaccacgaaacggcggcagtactacgacaagaaggtgtccgaggtgctcaagggccag
agggtggacgagaacgacgagttccacctgtacgcttttggcatgaagctgacctgtccc
attccggaagagcagaacacacgtggccgcaaaatccatgacccggccgacactgcccga
ggcttcggactggtcacctccaggcggatcccactgatctgcagcttcccggtgttcacg
cggtcgggcgaggtgacggtggagctggaacacataagctcggacattggcccactgtct
ccgaagcaggtccgtgacctcacgaccttccaccgatacacgtttaccaacgtgctgcgg
ctcgagaagtatccgatgaccttcaaccctgagggcgacgcatgctcctttctggtggtg
cccatcaatgccgtaaagacgaccgacgaccagccaggctccacaaccatcgactggcag
ttcgtcgagcgcatttgcgaggaagagaagttcatgccgcgtcgagtgnccgaggaagag
cgcgagctttttgtgttcaaggaagaagactacctcgacactgtggtgacgccttggtac
cgcaacctggacaagccccagttcttctatgtggccgagatctgccacgacctgaacccg
ctcagcgactttccagatgcaggcttcgatacgtttgatgcatactacagggagaagtac
cagatccgagtggtggacggtcggcagccgctactagacgtggaccacacgtcggcacgg
ctcaacctgctgacacctcgttacgtgaaccgcaagggtgtgacgctacccacttcgtcg
gagcagaccaagcgggccaaacgtgagagcctgcagcaaaagcagatcctggtgcccgaa
ctctgcgccatccacccgttcccggcgtcactgtggcgcaaggctgtctgcctgccctgc
atcctctacaggatgaactcgctgctgttggccgagcagctgcggctcacggtggctcgt
gaggtgcaagtgggtcggctggagctccccaaggacttcaagtggcccacgctggacttt
ggctggaccctggccgatgtgctacaaaaggcccaggaggccgccaaggccgaagaagag
cgtgctactgagctgatggagcgcacgggcatccagccggtccgcatctcgccaccgccg
gcgatgaacgcctggcgcgcacccgcgccctaccagccgccaatgttccagcaggaccag
gagctcgtcatcgacacattcgatccaagcaaagttcacattccggacgatgaccaactc
gaccagctagctgacgccgaggtcagcgcgctgaaccttggcggacccacaggtcccaac
ttcgactggaaaccgcttcccaaactaccaggggagcccacaccagttcctcgaatccgc
tacggatctccgagtaacttcgaagccgagggctgggattcggagtgggacacggacatg
gaggacagctcgttcgtcaccttggacatgccggggctgggctacatctccgcacccggg
gtgttcaacatgcagggcttgtcgctagacctggcctcgtgccgcgacgacgacatctgg
gacagctttgacgaggacgaggaagatcctgagctcgacttttcgcggtctgagtggaac
cagtctccgtcagaggccggcggcaacgaagatgaaggacacttgctcaaaatcagcgac
aagtcggagaacaaagacgatgagaagagacccgaggaaaaattggactggttatcgcac
tgcagcaaggaccagcgcagcaagtccgcaaacgctttcgtggacgagccagaagaagaa
caacgagaagttgatccatttgtcgaagagaaggtcgcggcgctcagggaggagtgcgtc
aagaaactggaagtttggagatgcaatgaagacgaagcgaaactcgcggctcggaaaaca
atctacaagtccttccgcagagtcgcagaggcgctaaagctcattgcagagtacgaagac
gaccggcccctgaagaaggacgagcctctggcaccagcagtccgtgatagcggagctacc
accactggaggggaggccccaaaggcaccggaagggagcgtgctaccatttggcgagctc
ttgccagacagggactccgtcaagcccggaggcggagacgcgtcgcaggttcgcttcgac
gagcggcccgatctcgacagtcactgcggcccgagccccagcatcctgctccaagcactg
acgatgtccaacgccaacgatggcataaatttggaacgtcttgaaacggtgggcgactct
tttctcaagtacgccgtgacggcccacctctattgcacgtatcccagcgtgcacgagggc
aagctgtctcacctacggagccgccagatcagcaatctcaacctctaccggctcggccgg
gctcgcaatcttggcggtctgatggtagccaccaagtttgagcccagcgacaactggctt
cctcccggctacatcgtgcctcctggactcgaaagggctctcattgaatcgggtcttccg
gcgggccactggaacattgcggccctcactggactcacccagatggacgaagcgcagatc
cggcagaccctcgctgagcgatccaacaaggtccgaaacctcgacgaggtcctagctgac
gagcagaccctcgacaccgcgccctatgtgccgtacaacctcctgacgcagcacagcatc
cccgacaagagcattgcggactgcgttgaagcactgattggtgcctacctagtgtcgtgc
ggtcctcatgcgaccctcctcttcatgtcttggttgggacttgatgtgcttcccaaaaac
tgcaccgcggagacgctgccgaactttggcgtcatgctgtatggtacgctagagccaccg
cttgttgtgcccgacgcggggccgcagctggatgagcttctctccggctacgatgcgttt
gaggcgcgcatcggttatcggtttcgggaccgtgcctatctcctccaggccttcactcac
gcgtcgtatcactacaaccgactcacggactgttatcagcgacttgagttcttgggtgat
gcggtgttggactacttgataacgcggcacctctatgatgacccccagcgccactcgcca
ggcacgttgactgacctgcggtcagcactcgtgaacaacactttctttgcctcgctggca
gtgaagtacgactttcatcgctacttcaagaatgtctcaccaggcctgtttgcagtcatc
cagaggtttgttgagatgaagagactgaacaatgggcttggataccatgaggagtactac
ttggaggaagaagagtgcgaggaggcagaggaggtggaagtgcccaaggccctcggcgac
atctttgaatcggtggccggtgccatcttcctcgactccaacatgtccctggacacggtt
tggcaggtgtactatgccatgatgaagcccgaaatagagtatttcagcacacatgtgcca
aagtccccaatcagggaacttttggagcttgaacctcagactgctaagttcgagcgtgct
gagatgaccctcaatggcaaggtgcggatccgagtggaggtcttcggcaagggccgcttc
gtcggcgtcggccgcaacaagcgcatcgccaagtgcacggctgccaagagggcgctgcgg
gcactcaagcgcatgcggcaagaaggcggcagcaccaatgtgcacggcaccttctag
DBGET
integrated database retrieval system
