Dermacentor silvarum: 119458169
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Entry
119458169 CDS
T07348
Name
(RefSeq) DNA polymerase lambda-like isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03410
Base excision repair
dsv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119458169
03450 Non-homologous end-joining
119458169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsv03400
]
119458169
Enzymes [BR:
dsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119458169
DNA repair and recombination proteins [BR:
dsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119458169
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
119458169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT_2
NTP_transf_2
LIG3_BRCT
HHH_5
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
119458169
NCBI-ProteinID:
XP_037575929
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All DBs
Position
1:24446557..24501342
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AA seq
486 aa
AA seq
DB search
MFSGARIFIVPTGIGGPRVKLYKSKAAEHGATVVSDEKLATHVVVGESLDGYRISKIVDS
ANLPTSVKIVKCTWLSECLKSRSLLETTTYELHCTPSPSASTMFCQDSNGAPSKRARLSR
ELADSAPQPGGSRSAESSILQKTVASDKWVCAVASTDIPVNKNSHITDQLEAMVETYQST
KDHWRALGYEKAVMQLKRHSTEITTWEEARALPNVGKRLADKIWEIVQQGRLQKLEEFQS
QEHLVAQNLFTKIWGAGPSTAQKWVQQGFRSLEELAAKGNLSSQQKIGLKHFHDFLDKMP
YAEAGLIADTVKTAALSIQPGLEVIPCGSYRRGRAMCGDVDVLITHPDGKSHEGVLCKIL
QILHESNFLTDDLAVPHEVGSPRKYMGVCRIPEEGSKHRRLDIFVVPQEEFACSLLAFTG
SAHFNRSMRLLARRKGMSLNDHGLYADVCRTGEEKIGHGKRLPTPTEESIFEHLGLEYRP
PEERDH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaggagctcgcatatttattgtgcctacaggcattgggggcccacgggtgaaa
ctttataagagtaaagcagcggagcacggggctacagttgtgagtgacgaaaaattggcc
acacacgtagtcgtgggggagtcgctggacggataccgtatttctaaaattgtggactca
gcaaacttgcctacatccgtgaaaatcgtaaaatgcacgtggttaagcgagtgcttgaaa
agcagatcgttgctcgaaacaacaacgtacgagctgcactgcacgccatcgccgagtgct
tccactatgttctgccaagattctaacggtgccccttctaagcgggcaagactttctcgt
gagcttgcagatagcgcacctcagcctggtggctcccggagcgccgaatcctcgatactg
cagaaaacagtagcttcggacaagtgggtgtgcgcagttgcttccaccgacattcctgtg
aacaagaattcccacataactgaccaattggaggccatggttgaaacctaccaaagcact
aaagaccactggagagcccttggttatgaaaaagccgtcatgcagctcaagcgacattct
acagaaatcacgacatgggaggaagcaagggccctgcctaacgttgggaaaaggttggca
gacaagatttgggagattgttcagcagggcaggctccaaaaactggaggaattccaaagc
caggagcatcttgttgcacagaacctgttcacaaaaatatggggtgctgggccatcaaca
gcacaaaagtgggttcagcagggttttcgttcactggaagaacttgctgccaagggaaat
ctgagtagccaacagaagattgggctcaagcacttccatgacttccttgacaagatgcca
tatgctgaagctgggctgattgcagacacagtgaagacagctgccctgtcgatccagcct
ggactcgaggtgattccatgtggttcctatcgcagaggcagagccatgtgtggtgatgtt
gacgtcctgatcacacaccctgacggcaagtctcatgagggtgtgctctgcaagattctt
cagatccttcacgaaagcaactttctaactgacgacctcgctgtaccacatgaggttggc
agtcccaggaagtacatgggtgtttgcaggataccagaagaaggcagtaagcatcgtcgg
ctggacatttttgtggttccccaggaggaatttgcctgttctctgctagccttcactggt
tctgcccattttaatcgttccatgcgcctcctggcacgtcgcaagggcatgtccctcaat
gaccatggcctttatgcagatgtttgcagaacgggggaagagaagataggccacggaaaa
cgacttcccacgccaacagaggaatctattttcgaacaccttgggcttgaataccgacct
cctgaagagcgagaccactag
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