Dermacentor silvarum: 119458437
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Entry
119458437 CDS
T07348
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like isoform X2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03022
Basal transcription factors
dsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119458437
09124 Replication and repair
03420 Nucleotide excision repair
119458437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119458437
03036 Chromosome and associated proteins [BR:
dsv03036
]
119458437
03400 DNA repair and recombination proteins [BR:
dsv03400
]
119458437
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119458437
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119458437
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119458437
DNA repair and recombination proteins [BR:
dsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119458437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
AAA_22
SNF2-rel_dom
AAA_11
NAMPT_N
PspAA
Motif
Other DBs
NCBI-GeneID:
119458437
NCBI-ProteinID:
XP_037576202
LinkDB
All DBs
Position
7:129664318..129850019
Genome browser
AA seq
759 aa
AA seq
DB search
MKIDVDGLPVFFPYDYIYPEQYAYMVQLKQCLDAKGHGVLEMPSGTGKTVTLLALILAYQ
KAFPAMISKLLYCSRTMPEIEKVVEELRRLLEHYKQETGEEMSLLGLCLTSRKNLCIHPQ
VSLERDGRVVDGRCFSLTASYRRAQATDPATQCCSFFENFDAQGRDVPLPTGIYSVDDLK
EYGRQHQLCPYFVARQAVLHAKVVVYSYHYLLDPKIAEVVSKEMSRSAVVIFDEAHNIDN
VCIESMSVRLNKRTIEGSMENIDSLEQTIKELKEQDAEKLRTEYEQLLEGLREAREAREA
DLILANPVLPDEVLQEAVPGNIRLAEHFVAFLRRLLEYVKMRLRAQHMVQESPAAFLKDI
LQKVCLERKPLKFSAERLRSLLRTLEVPDPTNFSPLVRLCHFASLVSTYTKGFTVIVEPY
DERSPGVPNPVINLSCMDASLSIKPVFNRFQSVIITSGTLSPVEMYPKILDFRPVVSASL
SITLARPSICPLIVSKGSDQVALSSRFETRDEVSVVRNYGALLVELASCVPDGMVCFFTS
YVYLESVVAAWYEQGVLDQLQRRKLLFLETPDSAETALALANYVKACENGRGAVLLSVAR
GKVSEGVDFDHHLGRAVLMFGIPFVYTQSRILRARLEFLRDQFQIRENDFLTFDAMRHAA
QCVGRALRGKTDYGIMIFADKRFSRWDKRSKLPRWIQEHLQDSLCNLSTEEALQVVKRFL
RQMAQPFTREDQLGVSLLTAEQLQSDETKRKLESRVQLH
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgacgttgatggcctgccggtgtttttcccctacgactacatctaccccgag
cagtatgcctacatggtacaactcaagcagtgcctcgacgccaagggccatggggtgttg
gagatgccatcgggcacgggaaaaacggtcaccctgcttgccctcatccttgcctaccag
aaggcctttcctgccatgatatcaaagctgctgtattgctcacggacaatgcctgagata
gaaaaggtggtggaggagcttcgtcgtctgctcgagcactacaagcaagagaccggggag
gagatgtctctgctgggcctgtgcctcacttctcgcaagaacctctgcatacacccacag
gtgagtctggagcgggacggccgggtagtggacggccggtgcttcagcttgacggcctcg
tatcggcgggctcaggccacggatccagccactcagtgctgttccttctttgagaacttt
gacgcccagggccgagacgttcctcttcccactggcatctacagtgtggatgacctgaaa
gagtatggccggcaacaccaactgtgtccttacttcgtggcacgacaagccgtgctgcat
gccaaggtggtggtgtacagctaccactacctgctggaccccaagatcgccgaggtggtc
tccaaggagatgagccgcagtgctgttgtcatctttgacgaggcgcacaacatcgacaac
gtgtgcatcgagtccatgagtgtacgcctgaacaagcgcaccattgaagggagcatggag
aacattgacagcctcgagcagaccatcaaggagttgaaggagcaggatgccgagaagctg
cgcacggagtatgaacagctgctggaaggacttcgcgaggcacgggaagcccgggaggcc
gacctcatcctcgccaaccctgttctccccgacgaggtgctgcaagaggcggttccgggc
aacatccgtctggcggagcactttgtggccttcctgcggcgcctgctggagtacgtcaag
atgcggctgcgggcgcagcacatggtgcaagagagccccgccgccttcctcaaggacatc
ctgcagaaggtgtgcctggagcgcaagcccctgaagttttcagcggagcgcttgcggtct
ctgctgcgaaccctcgaagtgcccgaccccaccaacttcagccccctggtgcgcctctgc
cacttcgccagcctcgtcagcacttacactaagggctttacggtgattgtcgagccgtac
gacgagcggagtcccggtgtgcccaaccctgtgataaacctgtcctgcatggacgcatcg
ctgtccatcaagccagtcttcaaccgttttcagtcggtcatcatcacgtcggggacgctg
tcccctgtggagatgtacccaaagattcttgactttcggcccgtcgtctccgcttcactc
agcataaccttggcacgaccaagcatatgccctctgattgtgagcaagggcagcgaccag
gtggccttgagctcgcgcttcgagacacgcgatgaggtgtcggtggtgcgcaactatggg
gctctgctggtggagctggcgtcgtgtgtgccggacggcatggtgtgcttcttcacctcg
tacgtgtacctcgagtcggtggtggccgcctggtacgagcagggtgtcctcgaccagctg
cagcgccgcaagctgcttttcctcgagacgcctgattcagctgagacggcgcttgcactg
gcaaactatgtcaaggcctgcgagaatggaagaggggctgtgctcctttctgtagctcga
ggcaaggtgtccgaaggtgttgactttgaccaccaccttggcagggcagtgctcatgttc
ggcatcccttttgtctacacgcagagcaggattcttcgggcccggctggagtttctgcgg
gaccaattccagatccgggagaacgactttctcaccttcgatgccatgcggcacgctgcg
cagtgtgtgggccgagcgcttcgtgggaagactgactacggcatcatgatctttgctgac
aagcgtttctcacggtgggacaagcgtagcaagctgcctcgctggatacaggagcacctg
caggattctctctgcaacctgagcacagaggaggcgttgcaggtcgtcaagcgcttcctg
cgacagatggcacagcctttcacaagggaggaccagctcggagtgtctctactcaccgca
gagcaactacagtccgatgaaacaaagcgcaaactggagagcagggtgcagcttcactga
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