Dermacentor silvarum: 119458835
Help
Entry
119458835 CDS
T07348
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsv03036
]
119458835
Chromosome and associated proteins [BR:
dsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119458835
microRNA pathway
RISC loading complex
119458835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
Dicer_platform
Dicer_dsRBD
PAZ
dsrm
Motif
Other DBs
NCBI-GeneID:
119458835
NCBI-ProteinID:
XP_037576626
LinkDB
All DBs
Position
7:45222199..45278255
Genome browser
AA seq
1078 aa
AA seq
DB search
MGIPKAPLGSEVMLSFAVDELLPPYMPLREDGAPRITLTSAIGLVNRYCMVLPSDMFTHL
KPTYQMSTISVDGKDMYICTVYLPMTSPLKEAIQGRPMETKKYAKMAAALETCKRLHQIN
EFDNCLLPVKRILKLMEDSDNEEADDAPPGAPKPGTKKRRRVYQKRVCKLFTEARVLEAG
HYRLHILTTQLVRLASDLQNWRKEKLVDPEDCPLWFALLLREDMPCLPSFPIFTRSGDEL
VLVVRAGLVNLTADQCIQLQRFHHTIWHDVLRMKERPLLQFDMNTAPNCPVLAPVIKDGD
MSMIDWPFVDMVANWMNTEPAPRTDFKFQPSLYEDAVVVPRYAPLHYHHSTFYVKQIRTD
LTVDSIDGKGSFRDYLSLIHHLDVTDSTQPILEVVFTEVRLNLLTPRYRNRKGDVFQKKT
ATNRRAELRVPEFCDVHPVPAGVWRKAVCLPSILYRLNQLLVVEELRTSVAMETGIGLGT
FRGRWPDLDFQSAVSESASISFLPRPDGDEVEFGNLLRSHGEVEEIRMPRLSRSFEYQPE
LRGNPGPSPGLLLEAVTSAKAADGFDLERLEVLGDSFLKFAVTIDLFCGSTSAQEGLLTQ
ARSRIICNRNLHQLGSKIHVGSMVAQEQFEPLRNWLPPGYCVPEGAEDILMDVDFVFWAI
QVDTKILEKLTRDKLFSLYEQYRTEKKQPGYVPPPRNTSGPVPIRQASQLPDKSVADSVE
AIIGAYLLVTGPIGALRVMKWMGLKLKQCNLDVQGTGDESTAVPFMGFPAPQTSLLRYTN
DPEGRLASQSSPWHGRLCLVEKTLGYTFRDRSYLLQACTHASYYQNRLTDCYQRLEFLGD
AVIDYLVTRYLYEGPHKFNPGQLTDLRSSLVNNTFFAALVVRHGLHRCLLHCNPGLFNAV
ARFVQHQERSSEDEFGTSSEDEDATAEILDLNAQRDKVPDNPTYWKVLQRFYYHEEECLE
PEEVEVPKALGDLFESLMGAVFLDCGMSLDTVWRILYRLFGREIESFSERVPLPPIRTLL
EKFPEARFGPAEVLKNEKVKVELILPDRTFTCVAKSKKLAKTALAKKCLRMMKTCGSG
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgggcataccgaaggcgccgctcggctccgaggtcatgctgagctttgccgttgatgag
ctgctgccgccatacatgcccctgcgtgaggatggtgctcctcgcatcacactaacctct
gccattggccttgtcaacagatactgtatggtccttccatcagacatgttcacgcacctg
aagcccacctatcagatgagcaccatatcagtggacggcaaagatatgtacatctgcact
gtctacctgcccatgacgagtcctctcaaagaggccatccagggacggccaatggaaaca
aaaaagtatgcaaagatggctgctgccctcgagacatgcaagcggctgcaccaaataaat
gagtttgacaactgcttgctgcccgtgaagcgcattctgaaactcatggaggactcggac
aacgaagaagcggatgatgcacctccgggtgcacccaagcctggcacaaagaagcgcagg
agagtgtatcagaagcgggtgtgtaagctgtttaccgaggcacgagtcttggaagcgggc
cactaccgcctgcacatcctgacgacacagctggtacgcctggcgtccgatctccagaac
tggcggaaggagaagctcgtcgaccccgaggattgcccgctgtggttcgccctgctcctc
cgtgaggacatgccttgcttgccgtcatttccaatctttacgcggtccggcgacgagctg
gtgttggtggtccgggcgggcctggtaaacctcaccgctgaccagtgcatccagctgcag
cgcttccaccacacaatctggcacgacgtgcttcgaatgaaggagagacccctgcttcag
ttcgacatgaacactgcacccaactgtccggttttagctccagtgataaaagatggcgac
atgtctatgatagactggccctttgttgacatggtcgccaattggatgaacacggagcct
gcacccagaactgacttcaagttccagcccagcctgtatgaagatgctgtggttgtgccc
cgctatgcaccccttcactaccaccacagtacattctacgtgaagcagatccgcaccgac
ctcacggtggacagcatcgatggaaagggcagtttccgtgactatctgtccctaattcac
cacctggacgtcaccgactcgacgcagccgatcctggaggtggtgttcaccgaagtccga
ctaaacctactgacgccgcgctaccggaaccgcaagggcgatgtgttccagaagaagacg
gccacaaaccgccgtgcggagctgcgcgtcccggagttctgcgacgtccaccccgtcccg
gctggcgtctggcgcaaggcggtgtgccttcccagcattttgtaccggctgaaccagctt
ctcgtcgtggaagaactgcgcacatctgtcgccatggagacgggcattggcctcgggaca
ttccggggccgttggccagacctggacttccagagcgctgtatcggaaagtgcttcgatc
agctttttgcctcgtcccgacggtgatgaggtggagtttggcaatctgcttcgtagccac
ggcgaagtggaggagatacggatgccccgcctatcgcggtcgttcgagtaccagccggag
ctgcggggcaacccgggcccgagccctggcctcctgctggaagcagtgacatcggcgaag
gcagccgacggctttgacctcgaacgcctcgaggtgctcggggactcattcctcaagttt
gcagtgaccattgacctgttctgcggctccacgtcagcgcaggaggggctgctgacgcag
gcgcgttctcgcatcatctgcaaccggaacctgcaccagcttggctccaagatacacgtg
ggctcaatggtggcacaggagcaatttgagccactccggaactggttgccaccgggctac
tgtgtccccgaaggtgcagaggacatattgatggatgtcgactttgtgttctgggccatc
caagtagacacaaagattctggagaaactgacgcgggacaagctcttcagcctctatgag
caatacagaactgaaaaaaagcagccggggtacgttcccccgccccgcaacacatctggg
cctgttccgatccgccaagcgtcgcagctgcctgacaagagcgtcgctgactcagtggag
gctatcattggcgcctaccttctcgttactgggcccattggtgctctcagagtgatgaag
tggatgggcctgaagctgaagcagtgcaatctggacgtgcaaggcaccggggacgaaagc
actgcagtgccatttatgggattcccagcgccacagacgtcattactgcgttacacgaat
gaccccgagggccgcctggcaagtcagagcagtccgtggcacggacgtctctgcctggtg
gaaaagacattgggctacaccttccgcgaccggtcctacctgctgcaagcctgcacgcac
gcctcctactatcagaaccggctgacagactgctaccagcggctggagttcctgggtgac
gcagtaatcgactacctggtgacccggtacctgtacgagggcccgcacaagttcaaccct
ggccagctcaccgacttgcgttcatcgctggtgaacaacaccttcttcgccgccctcgtc
gtgcgccatggcctccaccggtgcctcctccactgcaacccgggtctgttcaacgctgtg
gcacgctttgtgcagcaccaagaacgctccagcgaggacgagtttggtacctcttccgag
gatgaggatgccacggctgagatcctagatctgaacgcccaaagggacaaggtcccggac
aaccccacttactggaaggtgctccagcgcttctactaccacgaggaggagtgcctggag
cctgaagaggtcgaggtgcccaaggccctgggcgacctgtttgagagtctcatgggggcc
gtgttcctagactgcggcatgtcgctggacacagtgtggcgcatcctgtaccggctcttc
ggtcgcgagatcgagtccttcagcgagcgggtgcccctgcccccaatacgcacgctgctc
gagaaatttccagaggcccgcttcggcccggctgaggtgctcaagaacgaaaaggtcaag
gtggagctaatcctgccggacaggaccttcacatgcgtcgccaagagcaagaagcttgcc
aagacagcgcttgccaaaaagtgcctgcgaatgatgaagacctgtggatccggctag
DBGET
integrated database retrieval system
