Dermacentor silvarum: 119460550
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Entry
119460550 CDS
T07348
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsv03009
]
119460550
Ribosome biogenesis [BR:
dsv03009
]
Eukaryotic type
90S particles
Other 90S particles
119460550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Suf
TPR_19
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_8
HAT_Syf1_CNRKL1_C
OB_RRP5_4th
TPR_CcmH_CycH
TPR_2
ARM_TT21
ARM_TT21_5th
TPR_16
ARM_TT21_N
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
119460550
NCBI-ProteinID:
XP_037577414
LinkDB
All DBs
Position
1:37242749..37365286
Genome browser
AA seq
1817 aa
AA seq
DB search
MDDCELPRGEVQRTFSSLKRSTVEKDDLFKARDSDLPKKRNRKRKKKSQKGDEAEEDEAS
SVVVEPLTIRLLAEGLVVLGRVQQVQEFGLRVSLPGAITGRVSLTNISQPYRLLLRQFAQ
GVQDQTTEILPLPRLFQEGQTVVCKVIAAAPVEWGSSKVSVDLSLDPAAVNASMTPSILQ
KGMVLQAAVSSIEDHGYTMDCGVDGVTAFLSRAEATTFIKQCNAGHALAVGQLVQCAVLA
DPGGGRALQLTARPSTVNAPLELEDFSLDYVLPGFRAEVTVIETQNEGLVVGWNGMEACV
HRSHLPGPWDSPEDIAVGQTLVGTLLYVQPLVQRPYLSLQKPLSRAMFGAIRPGALLEGA
AKVVAIEAGAVHMRLEPSGVRALCPRPLVADQDVEDARDFVTAGECLTCRVMALSYMDRV
VVVSLKKSMLSEKYVTADALVPGAKFECTVRQMQRSGILVSLSPWMAGFIQALHASGPDE
EQPALGSKVRCRLLNVDRSFDPPRLLLTCRRALVTSKRPIITTYDDATPGKLTEGLIVRT
TPQGLLVALYNNIKGWVPSRELPHPGHSINANYTEGKVVTCRVVDCQPSEERLTLSLKLA
PKGEQEEEKMPAEAITNSLKPGAMEVGTLVSGSIEARVKDGFTVRLRSGECASLPRQHLS
DFEPHCAHLHRLLAEGTNLTNLVIFNSSGNLVVSRKTSLVNAAQRELLVSCFEDMEPGTL
VFGVLLAFVRHGMLLELPAGIRGFVPLKDVADEFLSDASKSGFVIGQCLVARVTKVDSEK
QQVWLSTSMSSCGEKNFGSTMECLAAQLTDEELLSRLEQTQVPSIGSIIRVTVEDVDEEN
QLVHCKIGESALSATAESVPGRNIASGSTHEAVVLHCSTAHSNVELCLDPQVVRNVNAAK
RIKPVQRRVQSGRVLLVKPNHMVVLLLSGHLCLVPTKSHFNSTFHLPLEKGTIASVWTWK
LCGNVIVGCTKTTADHLGHMEAAKLHTRKEKGESTSAAVVQPRKDSCPGGAKLIPNIDSE
ALAINQLDVKTQQRKRKNSEAEQGSSMDDSGITKGKNLDSRSAIEDDSEHAVEMAASSKT
VSTSLEQKEITSQKKKLNMRSCMAIVRAVEKLQLKVTLENGYKGRVHISFVDENPKEGES
PLKRFEPGDQLEVYVLERVIPLHRRALAITGRRNFCECSLYPAESTEFAPAPGSEVIGYF
SHFSEGSLYFALTHNKMGKLPVLNMDLPPSRLGYIQTDFKAGQAVKVKVLRADESSMVEL
SQLGVTTLTVDSVVNGCVVSARAGVGACVSLPLGHHGTISITDICDDFSQAAALMANYVQ
ERYLQCYILDLDSETNTYHLSTRESRLHLESCREVVDKEIVALSNLSAGTTLRGFVKTVN
KHGCFVTVGCGVVGLIPMSKLPAPLQRNQKAMKIGELVSVVVKRIQASERRLFLGLVHRV
QAKTALPRKRKLSTSSTEESIFDSCEKKIKLGDPLPRLTLDEGFSWDVEATPDLGKLLEE
RPAVCSSDDEDGNEDNTRKSQKDIRQEREQAEAQLRKKERMLVDPSREPETVDDFDRLVL
VSPNSSIVWLRYMAFHLRQAEIEKARAVARRALSCIDFREEHEKLNVWTALLNLEHLYGT
QDSLDTVFKEALQFNEPLKVYMHLAQIYVAGNKQEQAEQLYKQMLNKFKQKADVWLSFGL
FYMKCGQIEACRALLQRALKSLQSREHIVLISKFAQMEFRYGDPERGQSMFNSILDNYPK
RTDLWLVYVDILMKLGDVENARKTFEKATSLNLNPKKMKSLFKKWLDFEKEHGDASLCQV
VKQRAVQYVQQRTSAAQ
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgtgaattgccccgtggtgaagtgcagagaacattttcctctctgaaaaga
tctactgtcgagaaggatgacctgttcaaggcccgtgacagcgacctgccaaaaaagcgc
aaccgtaagcgaaaaaagaagtctcagaaaggggacgaggcggaggaggatgaagcctca
tcagtggttgtggagccattgacaattcgtctgctggctgagggcttggtggtgttgggc
cgtgtgcagcaggtgcaggagtttggtctgcgtgtgtccctcccaggggccatcacaggc
cgtgtatctctgactaacatctcgcagccatacaggctcctgctgcgccagtttgctcaa
ggggtccaggatcaaaccacagagatacttcccctgccaaggctgtttcaagaaggccaa
actgttgtctgtaaggttattgctgctgctccagtagaatggggatcttccaaggtgtct
gtcgatctttccttggatccggctgcagtgaatgcctcgatgacaccgtcaatactacag
aaaggaatggtactccaggcagcagtatcgagcatagaggatcatggttacaccatggat
tgtggagtggacggtgtcactgccttcttgtctcgggctgaagcaactacattcatcaag
cagtgcaatgcaggtcatgcactggctgttggccaactggtccagtgtgcagttctggct
gatcctggaggtggccgagcattgcaattgacagcacgaccttccactgtcaatgcaccc
ctggaacttgaggacttcagcttggactatgttctgcctggtttccgtgcagaggttact
gtaatcgagacacagaatgaagggctggtggtaggctggaatggtatggaagcgtgtgtg
catcgcagccacttgccaggaccttgggatagcccagaggacattgcagttgggcagaca
ctggtgggcacattgctctatgtgcagccacttgttcaacgaccctacctgagtcttcag
aagcccctgagccgagccatgtttggagcaattcgccctggtgccctcttggagggtgcg
gcgaaagtggtggccattgaagctggtgccgtgcacatgcgcctcgagcccagtggtgtc
cgtgccctctgcccacgacctctggtagctgatcaagatgtcgaagatgcccgtgacttt
gtcactgctggtgaatgcctcacctgccgtgtcatggctctcagttacatggatagagtt
gtggttgtgtccctgaagaagtccatgctgtcagaaaaatatgttactgccgatgctttg
gtgcctggagccaagttcgaatgtacagtgcggcaaatgcagcgttctggtatactggtc
agtttgagcccttggatggcaggctttattcaagcactgcatgcgagtggtccggatgaa
gaacagcctgctcttggctctaaagtgcgttgtcgtctgctcaatgttgaccgtagcttt
gacccacccaggctgcttctgacctgccggcgtgcactggtcacttcaaagcgcccaatt
ataaccacctatgatgatgccactcctgggaaacttacagaaggccttattgtccgtacc
acaccgcaagggctcctcgtggctttatataacaatatcaaaggctgggtgccttctcga
gaattaccacatcctggccacagcataaatgcaaattacaccgaaggcaaggttgttacc
tgtcgtgtagttgactgccaaccttcagaagaacgtttgacattgtcactaaagctggca
ccaaaaggggaacaggaagaagaaaagatgcctgctgaggcaataacaaactccttgaag
cctggtgccatggaggtgggaactcttgtctctggtagcatcgaagcaagggtaaaagat
ggcttcactgtgcgacttcgctctggagaatgcgcatctctccccaggcagcacctgtca
gatttcgagccacactgtgcacatcttcatcgactgcttgcagaagggaccaatctcacc
aaccttgttattttcaactcctcagggaatctcgtggtgtcacggaaaacatcacttgtg
aatgcagctcagagggagttgcttgtttcttgctttgaagatatggagccaggtactctt
gtgtttggtgttctgttagcctttgtgaggcatggtatgctgctggagttgcctgcaggc
atccgaggctttgttccactcaaggatgttgcagatgaatttcttagtgatgcatccaag
tcgggctttgtgattggccagtgcctggtagccagggtgacgaaagtggactctgaaaaa
cagcaggtctggttaagcacgagcatgagcagttgtggtgaaaaaaactttggtagcacc
atggaatgccttgcagcacaacttactgatgaggaactcctctcaagattagagcaaact
caagttccgagtattggaagcatcatcagagtgactgtggaagatgtggacgaagagaac
cagcttgttcattgcaagattggggaaagtgcactatctgccacagctgaaagtgtccca
ggcaggaacattgcaagtggtagcacacacgaggctgtcgttctccattgcagcactgca
cactcaaatgtcgagctgtgccttgacccccaagttgtacggaatgtcaacgcagcaaag
agaataaagcctgttcagcggcgtgtccagtccggtcgagttctccttgtgaagcccaat
catatggtggttcttctgctgtctggccacttgtgcctggtgcctaccaagagtcatttc
aactccacctttcatttaccccttgagaaagggaccattgcttctgtgtggacttggaag
ctttgtggaaatgtcatagttggctgcacaaagaccactgctgaccatttggggcacatg
gaagcagccaaattgcacaccagaaaagaaaaaggagaatctacaagtgccgccgtggtg
caaccaaggaaagattcatgtccaggtggagctaaattaattcccaacatagatagtgaa
gcactggctattaatcagcttgatgtgaagacacagcaacgtaagcgaaagaactccgaa
gctgagcaaggcagtagcatggatgattccggtattaccaaaggcaagaacttggacagc
agaagtgctatcgaagatgattcagaacatgctgttgaaatggctgcaagcagtaaaaca
gtaagcacatcattggaacaaaaggaaattaccagccagaagaaaaaactaaatatgcgg
agctgcatggctattgtgagagccgtggagaaactgcagctcaaagttacccttgaaaat
ggctacaagggccgtgtgcatatcagctttgttgatgagaacccaaaagagggtgagagc
ccactgaagaggtttgagcccggtgatcagctggaagtgtatgtcttggagcgtgttata
ccccttcataggcgggcattggccatcactggacgcaggaacttctgtgaatgcagcctc
tacccagccgagagcacagagtttgccccagcaccaggtagcgaagtcattggatatttt
tcacatttctctgaaggaagcctgtactttgcattgacgcacaacaaaatgggcaaactt
ccagtgttaaacatggacctaccaccatcgaggctcggctacatacagactgacttcaag
gctggccaggctgtgaaggtcaaagtcctcagggcagatgaaagctcgatggtggaactt
tcacagctaggtgtaaccacattaactgtggacagcgttgtcaacggctgcgttgtgagt
gctcgagctggtgtgggcgcatgtgtgtccctcccccttggtcatcatgggacaatcagc
atcactgacatctgtgatgacttcagtcaagctgcagcactgatggccaactatgttcaa
gaacgctatttgcaatgctacatcctagacctcgacagtgagacaaacacataccacctt
tcaacgagggagtctcggctacatcttgagagttgcagagaggttgtagacaaggaaatt
gtggcactcagcaacctcagtgcaggcactacgcttcgagggtttgtgaagactgtgaac
aaacatggttgttttgtcactgtgggatgtggagtagtgggactgatacccatgtctaag
ctgccagctccattgcaacggaaccaaaaagccatgaaaatcggtgagctggtcagtgtt
gttgtgaaaagaatccaggcctcagagagacggctatttctgggtctagtccatcgtgtg
caggcaaagactgcattgcctcgcaagaggaaattgtctacctcatccacagaggagtca
atatttgacagttgcgaaaagaaaattaagcttggggaccccctgcctcgactcactctg
gatgagggattcagctgggatgtcgaagccacaccagacttgggaaagttactggaagag
cggccagctgtttgtagcagtgacgacgaagacggcaatgaagacaatacaaggaaaagc
caaaaagatatccgtcaagagagggagcaagctgaagcacagttacgcaagaaggaacgc
atgctggttgacccaagccgtgagcctgagacggttgacgattttgatcgtctggtgctg
gtttcacccaacagttctatagtatggcttcgatacatggctttccatttgcgtcaagct
gagattgagaaagcacgtgctgtagcaagacgagcactgtcatgcattgacttcagagag
gagcatgagaaactgaatgtgtggacagcactgctcaacctggagcacttgtacggcaca
caggattcacttgacactgtcttcaaggaggcactgcagttcaatgagccactaaaggtc
tacatgcacttggcacagatctatgtggcgggcaacaagcaggagcaagcagagcagctg
tacaagcagatgctgaacaagttcaaacagaaagcagatgtttggcttagctttggcttg
ttctacatgaaatgtgggcagattgaggcttgcagagcccttcttcagcgagctctcaaa
agcctacagagtcgggaacatattgtgctaatatcaaagtttgcacaaatggagtttagg
tatggtgatcctgaaaggggccagagtatgttcaacagcattctggacaactacccaaag
cgcactgacttgtggctggtgtatgtggatattctcatgaagctgggcgatgtagagaat
gcaagaaaaacctttgaaaaagccacatcactcaacctgaatcccaagaagatgaaatct
ttgttcaaaaaatggcttgactttgaaaaggaacatggtgatgcatcattatgtcaggtg
gtgaagcagcgtgctgtgcagtatgttcagcaacgcacaagtgctgcacagtaa
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