Dermacentor silvarum: 119460625
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Entry
119460625 CDS
T07348
Name
(RefSeq) SR-related and CTD-associated factor 8-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119460625
03041 Spliceosome [BR:
dsv03041
]
119460625
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119460625
Spliceosome [BR:
dsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119460625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119460625
NCBI-ProteinID:
XP_049529038
LinkDB
All DBs
Position
8:10876181..10948599
Genome browser
AA seq
1834 aa
AA seq
DB search
MEVVKAFNSELTSLYEGKPPISKAKMTAITKSAIKAIKFYKHIVQSVEKFVQKCRPEYKV
PGLYVVDSIVRQSRHQFGQDKDVFAPRFTKNIHNTFQHLFKCPVEDRPKIVRVLNLWQKN
QVFPPDVIQPLLDMASPAAVPGGDSAQSSDVVADTKANKNSTENWKSWNHGNSIQDSMSG
TGQETKTYALTQWLNQSEMPVPSKASEENLNLAMAAEAENAAPPDPELLVKLQSLASQLL
TNRPGSSSAAEDKPPSHQPAAPTVKFNKKLLDFDYGDEEEEEEEESFEETKPADFVEPPL
EDSGGQSSEPNAIALSMAQNLLNNPELLKQLQQMQQTLQQQSSEALRAQEAASSTPTASA
SAPAGSGAAAPAHSLPSGPFTNPDGSSSQQLSPDLPPLPQTPQPQTPNGSHAALQQTTQL
ANAPALVTPGYAGTPGAPVLPQVFQDTAALYPPVAPMGGIGFVGGGEPPGGFAPLAAGPT
SADEPPISASMESGGAATLPSYMSGGDLDERCGVVLGPGGRDMDLRTAAGGLPSPGRERD
RRRHSRSRSPRRRGRSRSRSPSRASGNRYVSTTKGDRSRERETRESAREKERERERERRR
KGFPPVKKNCLSVCSATLWLGHVPKSVSEMDLHDTFGEFGAIVRIDMIPPRGCAYVCMDR
RQDAFRALQKLKNLKLQGSLIKMAWAPGKGVKGKELKDFWEVDLGVSYIPLDKLPADVNL
LALEEGGVIDKDSLSDNLKEKYAGQERQRGMGEPLAPMMLDLVQQQQQAASAEAMMAVAF
PPAPVPPTAVAMVPPPVPQFSIPLPPVGQGSVKTNEAQIKSACMLPSQSLVMPQIQLPMG
VPPPPNHMLMVPPNTSQTLLGPSALGLIPPPLSLPGNALGMPLHPPMSLPVTSQAAVMPI
VTTASPAASSAPAATVTQPPAAVAAPIATPSATPVTESETTDVPMAIDGDATPTDEDGTS
EASRLGMIPPASGESAVGSNKEPAESVKPAGNEFGTAHPPGGYVPLSAPPGMPGQFGNRG
LLAEEKVNAGAAKEAKSPVAASSHEASSTDPKATQSEKTDPENMQMDESSSGQQAAEPGQ
EACTFDVPPVSSAIPMPVGLPGMPSLPVPPRAFGSAPIRFRGPPMFPFENPADGRPGMEF
PGPRMMGPDPRMIVPPAGDFRPPNPHNQAIMGGPGEQRMMGGPLEQHMLDGPPEARMMGG
PMEHRMHRGPEPRMMGGPPEPQMIGGPMEPRMMGGPPEPRMMGGPEELRMLGGPPEHRMM
GGPRDHRMIGGPMPEPRMMGGPPDHRMMGGPPPDHRMMGGPPPDHRMMGGPPLDHRMMGG
PPPDHRMMGGPPPDHRMMGGPPPDHRMMGGPPPGHRMMGGPPPDHRMMGGPPDHRMMGGP
PDHRMMGGPPDHRILPGPPDHRMLRPPDFRLGGPPPDLRKLGPPEPRMLAPGLRMPAPNM
PPLIGPGVTDVKPIEGKGPESQGEKSVQEKLVELADQNRSENGEAPKEWKPPAGAPEPLR
GPNGPAAEERQDNGEQPWKQPGGFGFFGPSRSRFNESSSGRDGDEGGFGGERGNRRVFTS
VYGESSERRRSSGRERRSRWSRGEEEERDSRSRSERSERDRSDRDRSDRRDRDRSKDRDR
SKDRDRSKDRDRSKDRDRSKDRDRSKDRDRSKDRDRSKDRSDRDRDRDRDRDRDRGEREK
DRSDRSDRDRSDKDRDRSDRDRDRDRSERSDRDRDRDRDRDRDRDRDRSDRDRGEKDRSD
KDRSDRSRGDHSRSRDRERSSCRSHSSPEQTAAGAATATAETNGEVSSSSSSKSNGGSSS
AADVPLPKDVESKGPAESEAPKEAAEHAKPEVKA
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgtcaaagccttcaacagcgagcttacctcgctgtatgaaggcaaacctccg
atctctaaagccaagatgacagcgatcacaaaatcagcaatcaaagcaatcaaattctac
aagcacattgtgcagagtgtcgagaagtttgttcaaaagtgtcggccagagtacaaggtg
ccaggtctgtatgttgtggactctattgtgcgccaatcacggcatcagtttgggcaggac
aaggatgtattcgcaccacggttcaccaagaacatccacaacacatttcaacaccttttc
aagtgtccagttgaggataggccgaagattgttcgagtacttaacttgtggcagaagaac
caagtgttcccgcctgatgtcatccagccgctcttggatatggccagtccagccgctgtc
ccaggaggggactctgctcagagctctgacgtggtggccgataccaaggcgaacaagaat
tccactgaaaattggaagagctggaatcatggcaacagcatccaggattcaatgtctgga
actggccaagagaccaagacttacgccctcactcagtggctcaaccagagtgaaatgcct
gtgcccagcaaggcatcagaagagaatttgaacttggccatggcagctgaggcagaaaac
gcagcgcctcctgatccagaacttttagtaaagcttcagagccttgcatctcagctgctg
accaacaggcctgggagttcgtcagctgctgaagacaagccaccaagtcaccagccagca
gcccctactgtgaagttcaacaagaaactgctagactttgactatggggatgaagaagag
gaggaagaagaagaatcttttgaagaaactaagcctgctgatttcgttgagccacctttg
gaagactctggtggccagtcatctgagcccaacgccattgcactaagcatggcacagaat
ctgctcaacaaccctgaactgctgaagcagctgcagcagatgcagcagacgttgcagcag
cagtcatccgaggcgctgagggcacaggaggctgcctcatccacaccaacggcttcggct
tcagccccggctggtagtggtgctgctgctcctgcgcactccctgccttctggccccttt
actaaccctgatgggagcagcagccagcagctatcacctgacttgccgccgctgccccaa
acaccccagccacagacgcccaacggcagccacgctgctttacagcagaccacccagctg
gccaatgcacccgcccttgtcacgcctggttatgccggcacaccaggggcccctgtgctt
ccccaggttttccaggacactgcggccctgtaccctccggtggcacccatgggtggcatt
ggctttgttggcggtggtgagccacctggtggatttgcgcccctagcggcaggccctaca
tctgctgacgaaccccccatatcggcatccatggaaagtgggggggccgctacattacct
tcatacatgagtggtggggacttggacgaacggtgtggagtcgtcttgggccctggcggc
cgtgacatggacctccgtacagcagcaggaggcctgccctctccagggcgtgagagggac
aggcgaaggcacagtcggtcacggtctccgaggcggcggggccgctctcgttcccgatca
ccgtctcgtgcttctggtaatcggtatgtcagcacaaccaagggggaccgctcaagggag
cgggagaccagagaaagtgcccgagagaaagagcgtgaacgtgagagagagcgtcgtcgg
aaaggcttcccacctgtgaagaagaattgcctcagcgtttgcagtgctacgctatggctt
ggacatgttccaaagtctgtatcggaaatggacttgcacgacacctttggtgaatttggc
gccatagtcaggatagatatgattcctcctcgtggttgtgcctatgtgtgtatggaccgc
aggcaagatgcttttcgggcgttgcaaaaactgaaaaatctgaagttgcagggaagcctc
atcaagatggcgtgggcaccgggcaaaggtgtgaagggcaaagaactgaaagacttctgg
gaggtggacctgggtgtgagctacattccactcgacaagctacctgcagatgtgaatttg
ctggctttggaagaagggggtgtgatcgacaaggattctctctctgacaacctaaaagag
aaatatgccggacaggaacggcagcgtggcatgggtgagcctcttgcgcccatgatgctt
gacttggtacagcaacagcagcaggcagcatcagcagaagccatgatggcagtagctttc
ccaccagcgccagtgccccccacagctgtggccatggtgcccccacccgtgccccagttc
agcatcccactgccaccagtgggccaagggtctgttaagacgaacgaagcacaaattaaa
agtgcatgtatgctgccctcccagagcctggtgatgcctcaaatccaactgccaatgggt
gtgcctcctccacctaaccacatgctgatggtaccaccgaacacatctcaaacgctgttg
ggacctagtgcactggggctgattccaccacccttaagcttgcctgggaatgctcttggc
atgccccttcacccccctatgagtctcccagttacctcccaagcagcagtgatgcccatt
gtcaccacagcaagccctgctgcatccagtgcacctgcagcaactgtgacccagccacct
gctgctgtagcagcacctattgcaacaccttctgctacacctgtcacagaaagtgagact
actgatgtacccatggccattgacggtgatgccacgcccaccgatgaagacggcacgagt
gaagcaagtcgcctcggtatgatcccacccgcttctggtgaatcggcagtgggcagcaac
aaggaacctgctgagagtgttaaacctgctggaaatgagttcggaacggcacatccccca
ggaggatatgtgccactgtcagcaccacctggcatgccaggccaatttgggaaccgtggt
ctgctggcagaggaaaaggttaatgcaggggcagcaaaggaagcaaaatctccagtggct
gcatctagtcatgaagcatccagcactgatcctaaggccacacaatctgagaaaacagat
cccgaaaacatgcagatggatgaatctagttcagggcagcaggctgccgagccaggacag
gaagcttgtacctttgacgtacctccagttagctcagcaatcccaatgcctgttggactg
cctggaatgccttcactgcctgttccacccagagcatttggaagtgcacctatacgtttc
agggggccacccatgtttccctttgagaacccagccgatgggagacctggcatggaattc
cctggccctcgaatgatgggcccagatccaagaatgatagttcccccagcaggcgatttc
cgtcctcccaatccacataaccaggccatcatgggtggaccaggggaacagaggatgatg
ggtggccctttggaacagcatatgcttgatggacctccagaagcaaggatgatgggtggc
cccatggaacacagaatgcacagaggtcccgaaccaaggatgatgggtggtccaccagag
ccgcaaatgattggtggccctatggaaccgagaatgatgggcggaccgcctgagccaagg
atgatgggtggcccagaggaactccggatgctaggtggccctccagagcatcgaatgatg
ggtggtccgcgggaccatagaatgatcggtggtcctatgccagagcccaggatgatggga
ggacctcccgaccataggatgatgggaggcccgcctccagaccaccggatgatgggaggc
ccacctccagaccaccggatgatgggaggccctcctttagaccacagaatgatgggaggc
ccacctccagaccaccggatgatgggaggcccgcctccagatcacagaatgatgggaggc
ccgcctcccgaccacagaatgatgggaggccctcctcccggccacagaatgatgggaggc
ccgcctccagatcataggatgatgggcggaccaccagaccacagaatgatgggaggtcct
ccagatcatcggatgatgggcggaccaccggaccacagaatattgccagggccgccggac
cataggatgctcaggccacccgactttagattaggcggtcccccgccagatttgagaaag
ctggggcccccagaaccgcgaatgttggcgcccggtctccgcatgccggcccctaacatg
cctccactgattgggcctggtgtcacggacgtgaagccaattgagggaaaaggaccagaa
agccaaggagagaaaagcgtgcaagagaagctggtcgagttggctgaccagaacagaagc
gaaaacggagaagcgccgaaggaatggaaaccgccggctggcgcaccggagccacttaga
ggaccgaacgggccagcagctgaagagcggcaggacaatggtgagcagccatggaaacag
cctggtggtttcggtttcttcgggccttctcggtcgaggtttaatgagtcgagctccgga
agagacggcgatgaaggcggattcggcggcgagaggggcaaccggcgtgtcttcacaagt
gtgtacggcgagtcttccgaacggcgacgaagcagcggccgcgagcgaagaagccgctgg
tcgcgaggggaggaggaagagcgtgactcccggtcacggtcagagcgcagcgagcgagac
cgcagcgaccgggaccgcagcgaccgcagagaccgggaccgcagcaaagatcgggaccgc
agcaaagaccgggatcgcagcaaagaccgggatcgcagcaaagaccgggatcgcagcaaa
gaccgggaccgcagcaaggaccgagaccgcagcaaggaccgagaccgcagcaaggaccgc
agcgacagggatcgcgacagggaccgtgatcgcgaccgtgatcggggcgagcgcgagaag
gaccgcagcgatcgcagtgacagggacaggagcgacaaggatcgggaccgcagcgatcgc
gatcgggacagagaccgaagcgagcgcagcgatagggaccgcgacagggatcgggacaga
gatcgggaccgggatcgtgacaggagtgaccgcgaccgaggggaaaaggatcggagcgac
aaggacaggagtgatcgaagcagaggggaccacagccgaagtcgagaccgtgagcgaagc
tcctgccgaagccacagctcgccggagcaaactgcagcgggcgctgcaactgcgaccgca
gagacaaacggcgaggtgagcagcagcagcagcagcaagtcgaacggggggagcagtagc
gctgcggatgtgcctttgccgaaagacgtggaatccaagggccccgccgagtcggaagca
cccaaggaagctgcggaacacgcaaagccagaggtgaaagcgtga
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