KEGG   Dermacentor silvarum: 119461387
Entry
119461387         CDS       T07348                                 
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
  KO
K10752  histone-binding protein RBBP4
Organism
dsv  Dermacentor silvarum
Pathway
dsv03082  ATP-dependent chromatin remodeling
dsv03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119461387
   03083 Polycomb repressive complex
    119461387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dsv03036]
    119461387
Chromosome and associated proteins [BR:dsv03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     119461387
  Histone modification proteins
   HAT complexes
    HATB complex
     119461387
   HDAC complexes
    Sin3A-HDAC complex
     119461387
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     119461387
    PRC2.2
     119461387
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     119461387
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119461387
  Chromatin remodeling factors
   NuRD complex
    119461387
   NuRF complex
    119461387
   NuRF complex (fruit fly)
    119461387
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st eIF2A Beta-prop_RIG_1st Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 119461387
NCBI-ProteinID: XP_037578612
LinkDB
Position
8:complement(69105866..69126973)
AA seq 421 aa
MADKDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGRDYSIHR
LILGTHTSDEQNHLLIASVQLPSEDAQFDATHYDSEKGEFGGFGSVSGKIDIEIKINHEG
EVNRARFMPQNPCIIATKTPSSDVLIFDYTKHPSKPDPNGECSPDLRLRGHQKEGYGLSW
NPNLNGHLLSASDDHTICLWDINATPKENKVVDAKTIFTGHTAVVEDVAWHLLHESLFGS
VADDQKLMIWDTRSNNTNKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPE
LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEQETPATELEASA
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcagacaaggacgccgttgaagagagagtgatcaatgaggagtacaagatatggaag
aagaacactccttttctctatgacctcgtaatgacacacgcactggagtggcccagccta
acggcccagtggctcccagacgtgactcgccctgagggaagggactacagcatccacagg
ctcattttggggacacacacatctgatgaacagaaccacctgctcatagcaagcgtacaa
ttgccaagtgaagatgctcaatttgatgcaactcactacgatagcgagaaaggagagttc
ggtggttttggatctgtcagtgggaagattgatattgaaatcaagatcaaccatgagggg
gaagtcaacagagcgcgcttcatgccgcaaaacccgtgcatcatcgccacgaagaccccc
tcgagcgatgtgttaatcttcgactacactaagcacccctcaaagcctgatcccaacggt
gaatgtagtcctgatctcagacttcgcggtcatcagaaggaaggatacggtctttcttgg
aaccctaatctcaatggccacctcttgagtgcctcagatgaccacaccatttgtctctgg
gacatcaatgctactccaaaagagaataaagtggttgacgctaaaaccatcttcactgga
cacaccgccgttgttgaagatgtggcatggcaccttctccacgagagcctttttggatca
gtagcagatgaccagaaactgatgatctgggacacccgctcaaacaacacaaacaagcca
agccatacagttgacgcacacacagctgaggtgaactgcctctctttcaacccctacagc
gagttcattctggctacaggctcagctgacaagacggtggcactgtgggatctgcggaat
ctgaagctcaagcttcactcattcgagtcgcacaaggacgagatcttccaggtgcagtgg
tcgccccacaacgaaaccattttggcctcgagcggcaccgatcgacggctccacgtctgg
gacctcagcaagatcggggaggagcagtctgctgaggacgccgaggatggccctccagag
ctcctgttcattcatggaggccacacggccaagatatccgacttctcttggaatccaaac
gagccatgggtcatctgctccgtgtcggaggacaacatcatgcaagtctggcagatggct
gaaaacatctacaacgacgaagagcaagagacccctgcgactgagctcgaagcatcggca
tcctaa

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