Dermacentor silvarum: 119461563
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Entry
119461563 CDS
T07348
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
dsv
Dermacentor silvarum
Pathway
dsv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119461563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsv03400
]
119461563
DNA repair and recombination proteins [BR:
dsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119461563
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
RGI1
Motif
Other DBs
NCBI-GeneID:
119461563
NCBI-ProteinID:
XP_037578835
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Position
8:90225179..90300764
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AA seq
864 aa
AA seq
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MAELLPNVDIAEVERDPGFLGFLRSLPEKPATTFRFFDRNDYYTVHGADAEYVCREMYRS
MSALKYLGSGDARVASVCVSQRSYENLLSELLLVKHYRVEVYRNTAARGSASWSLAIQAS
PGNLAPLEDVLFGASSGGLSESKGVLAVSLHSNQQTLGIAYGDAVLQQLTVAEFMDDEHF
SNLCAVLAQLSPQECLLSATDAKRCPELKALLERSGALVTEAKTSDFNSKEIAQDLSCLL
QPSQLPQGQANMLVELDQKVAMDALAAVIKFLNLTSCAEHLGCLRLCTFEFGQFVRLNNA
AIRALAVLPADGEGSKAASEPSLLRLLNRCRTVGGQRMLSQWLRQPLCDLNRIEERLDLV
SLLVDDWELRQSLHEQLLRQFPDLLRLSRRLHKQRVSLQEIYKLYQCLQVLPKMREALTK
ASETHKSPLLGAIFAAPIQELEGDFSKYLEMVESTLDFEAVEQGDFLVKPEFDDELRALH
EELEKVKSECESYLRKAAKDLGLEAAKTIKLETSKDLGYYFRVTRKEEPVLRSRKGYTTI
DTKLNGVRFRNGSLTEANERFLEARKAYDRAQEGIAKMIVEIAAGYWEPLQQLSEVISHL
DVLVGFAVAAVSATNKPFVRPTMRPKGSGVIRMTALRHPLVEAQGDVLFIPNDVEMRKGS
SSCYIITGPNMGGKSTYIRSVALAVLMAQVGSFVPCDSAELSVVDAVLTRIGAGDQQLKG
VSTFMAEMLESAHILRNATADSLVVIDELGRGTSTYDGFGLAWAISEQLAKEVDAFCLFA
THFHELTELAAELPCVHNVHVTADVSKDSFILLYKVKPGVCSQSFGIEVAQLAHFPEHVI
KEARQVLSQYEGTAAKKDETPMED
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctgttgccaaatgttgacatcgcggaggtagaacgagaccctggctttctt
gggtttctaaggtccctgccagagaaaccggcaactacattccgcttctttgacagaaat
gattactacacagtccatggagcagatgctgagtacgtctgtcgagagatgtatcgcagc
atgtccgcactcaagtaccttggctcaggggacgcacgtgtggcatccgtatgtgtgagc
cagcgcagctacgaaaaccttctgtccgaactgctgctcgtcaagcactaccgggttgag
gtgtaccgaaacacagctgcacgtggttcggcttcctggtcccttgccatacaggcatct
cctggcaacttggcaccactggaagatgtcctctttggagccagcagtgggggcctttca
gagtccaaaggagtgttggctgtttctctgcattccaaccaacaaacgctgggtatcgcc
tacggagacgcggtcctgcagcagctgacggtggcagaatttatggacgatgagcatttc
tcgaacctctgcgctgtgctggcccagctgagcccccaggagtgcctgctgtcggccacg
gatgcaaagcgctgccccgagctgaaggccctcttggagcgttctggtgccctggtcacc
gaggcaaagacaagtgatttcaactcgaaagaaattgcacaggacctgagctgcttgttg
cagccatcccagttgccacaggggcaggcgaacatgctggttgaattggatcagaaggtg
gccatggatgctctggcagcggtcatcaaatttctcaatctgacgtcatgtgccgagcac
cttggctgtcttcggctttgcacatttgaatttggtcagtttgtgcgcctcaacaacgca
gccattcgagctctggctgtgctgccagcagatggagaaggtagcaaggcagcgtctgaa
ccgagcctcctgcgtttgctgaaccggtgccgcacggtgggtggccaacggatgttgagc
cagtggttgcgacagccactctgcgacctcaatcgcattgaggagcggctggacctggtg
tccttgctggtggacgactgggagctgcggcaaagccttcatgaacagctcctgcggcag
ttccccgacctcctgaggctgtcacgtagactccacaaacagcgggtctccctgcaggag
atatacaagctgtatcagtgcctgcaagtgctgcctaaaatgcgggaggcgttgaccaag
gcatccgagacgcacaagtcaccgctccttggcgccattttcgccgcgccaattcaggag
ttggagggagatttcagcaagtacctagagatggtggaaagcacgctggactttgaagct
gtcgagcagggagacttcctggtgaagccagagtttgacgacgagctccgagcgcttcac
gaggaattggagaaagtgaaaagtgaatgcgaaagctacctcagaaaggctgcaaaagac
cttggcctggaagctgccaagaccataaagctggagacgagtaaggatctgggctactac
ttcagagtgacacgcaaggaggagccagtattgcgttcacgcaagggatacacgactatc
gacaccaagctgaatggcgtgcgcttccgtaacggatcgctgactgaagctaacgaacgc
ttcctcgaggcacgaaaggcatacgatcgtgcccaagaaggaatcgccaagatgatagtc
gaaatcgctgctggctactgggagcccctgcagcagctgtcggaggtcatctcccacctc
gacgtcctagtcggcttcgcagtggcagcagtgtcagccaccaacaagccttttgtgcgg
cccactatgcgtccaaaaggctcaggtgtgatacggatgacagctttgcgccacccttta
gtggaggcccaaggtgacgtcctcttcatccccaatgatgtggagatgcgcaaaggttca
agttcctgctacattatcactggtccgaacatgggcgggaagtccacctacatccgatca
gtggccctagcagtgctcatggctcaagtgggaagctttgtgccgtgcgattctgccgag
ctgtcagtggttgacgccgtgctgacacgcattggagctggtgaccagcagctcaagggc
gtctctacgtttatggccgagatgctggagtctgcacacatcctcaggaatgcaacagct
gacagcctggtagtcatcgacgagctgggtcggggcacctccacttatgatggctttggc
ctggcttgggcaatttccgagcaactggcaaaggaggtggatgccttctgccttttcgcc
acccatttccacgagctgacagaactggctgcggagctgccctgtgtccacaatgtccat
gtcacagccgatgtcagcaaggacagttttatactcctttacaaggttaagccaggtgtg
tgcagtcaaagctttggcatagaggttgcccaactggctcatttcccagagcatgtgatc
aaggaagccaggcaggtcctgtctcaatatgaaggtactgcagctaagaaggatgaaacg
cccatggaggactga
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