Dermacentor silvarum: 119461754
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Entry
119461754 CDS
T07348
Name
(RefSeq) endoribonuclease ZC3H12A-like isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119461754
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119461754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
RuvA_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
119461754
NCBI-ProteinID:
XP_037579057
LinkDB
All DBs
Position
8:complement(147594965..147702337)
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AA seq
793 aa
AA seq
DB search
MECSADVVLRVRDMDALHCCLDRIRTLFNVRPEIVSVDDAVYSAPDPGLATGYPPVAGRS
VRLKLWADTASKPSALKASKELLATACESVSAADAVSALRCGAFSSSGSVESFTGAPGRP
DSVRRRRTLESEDSSYDSDTENPTDTTCTTTTTSSSTRQHEDVSRTVSETLGAEFAEYVT
AGPQYSSRLEFAVKLGYTEAQVQQALRRLGPQPGQNELLAELVRLGAREQSGDAAPRSDP
LSSSASQAAEDPLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVDWFRARGHTSISVFVPSW
RKEASRAETPIKDQEILLQLEKERLLFFTPSRNVGGKRMVCYEDRYILKMAAQTGGVVVS
NDNYRDLVAENLDFKRVVEERLLMYTFVNDRFMPPDDPLGRHGPSLDAFLRKSGTLPPEG
PPSCPYGKKCTYGNKCKYYHPERGNLPQKSVTERLAEQARLQLQEVKARGAIKSRDSSPG
GELLKTKSLPPGATEAMLPKKKVPLSRTKSSVPPPSASLLGADLLEADGGGHLSVAKRLS
DPDSGLGAFSLPKGSPVLSPGGAGSDDTLGSGNLHRKLQRQLTLNPACDPRLYQMRAAVS
SGLVPPPAVSLAEAVHGRAGSQENLQHRALGRLASDSGLVATAGGGWGTLPGAHHTEVTR
IASAPDSTRQQRSQQAAAIQRLSSTSDTRLDAFPLAGAATPVPAGQLFPSFPGLSPHAAA
GGWGGLPMGRPPPPLPLEVGAPPLDTASPRYRLYYHLSSIFPEEQVRAAMDLYPEETNPQ
KVCAAILAMFPKG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcagcgccgacgtggttctgcgtgtgcgcgacatggacgcgctgcactgctgc
ctcgatcgcatccggacccttttcaacgtgcggcccgagatcgtgagcgtggacgatgcg
gtgtacagcgcgcccgacccgggcctcgccacgggatacccgccggtcgccggtcgcagc
gtgcggctcaagctctgggcggatacggccagcaagccatcggcgctcaaggcttccaag
gagctgctggcgacggcgtgcgagtccgtgtcggcggccgacgcggtgtcggcgctgcgc
tgcggcgccttctcgtcctcgggttcggtcgagtccttcacgggggcgccgggccggccg
gactccgtgcgtcggcgccgcaccctggagtccgaggactcgagctacgactcggacacc
gaaaaccccacggacaccacctgcaccacgacgacgacgtcgtcgtcgacgcggcagcac
gaggacgtgtcccggaccgtgtccgagacgctgggcgccgagttcgccgagtacgtgacg
gcgggaccccagtactccagccggctcgagttcgccgtcaagctgggctacaccgaggca
caggtccagcaggccctgcggcggctgggccctcaaccgggccagaacgagctgctggcc
gagctggtgcggctgggcgcgcgggaacagtccggcgacgcagcgccccgatccgacccg
ctctcgtcctccgcgtcgcaggcggccgaggacccgctcaggcccatcgtcatcgacggc
agcaacgtggccatgagtcatgggaacaaggaagtcttctcgtgccgaggcatccagttg
gcggtggactggttcagggccaggggccacaccagcatctccgttttcgtccccagctgg
cggaaggaagcctcgcgtgcggagactcccatcaaggaccaagagatcctgctgcaactc
gagaaggaacggctactgttcttcacgccctcacgcaacgtgggtggcaaacgcatggtg
tgctacgaagatcgctacatcctgaagatggccgcacagacgggtggcgtggtcgtgtcc
aacgacaactaccgggacctggtagccgagaacttagacttcaaacgtgttgttgaggag
cgcctgcttatgtacacattcgtcaatgacaggttcatgccccccgatgaccccttgggg
cggcacgggccctcgctggatgctttcctgcgcaagagtggtacgttgccccccgaagga
cccccgagctgcccgtacggcaaaaagtgcacgtacggcaacaagtgcaagtactaccat
cccgagcgtggaaacctgcctcagaagtcggtcaccgagcggcttgccgagcaggcccgc
ctccagctgcaggaggtcaaggcgcgcggtgccatcaaaagccgcgactcgtcccctggt
ggtgaactgctcaagacgaaaagcctgccgcccggtgcgactgaagcgatgctccccaag
aagaaagtgccactctcgaggaccaagtcgtcggtgccacctccgtcggcatctctgctg
ggtgccgacctgttggaggctgacggtggaggccacttgtcggtggcaaagcggctctcg
gatcccgactcgggactgggagcattctcgctgcccaaagggagtcccgtactgtcgcct
ggcggtgcaggcagtgacgacactctgggcagcggcaacctccaccgcaagctccagcgg
cagctcacgctcaacccagcatgcgacccgcggctgtaccagatgcgggccgcggtgtct
tcgggccttgttccgccacctgcggtgagcctggcggaagccgtgcatggccgtgcggga
agccaggagaaccttcaacaccgggcactgggacggctggcaagcgactccggcctggtt
gccacggctggcggaggttggggcactctgcccggggcacatcacaccgaggtgacgcgc
atcgccagtgcaccggactcaacacggcagcaacggtcacaacaggcggcagcaattcaa
cgcctcagtagcacatctgacaccaggttggacgcattcccgctggcgggcgcggccaca
ccggtgccagccggccaactattcccttctttcccgggcctgagcccccacgccgctgcc
ggggggtgggggggcctgcccatgggcaggccgccaccaccgctgccactcgaagtgggc
gcaccaccactagacacggctagcccccgctatcgcctctactaccacctgtcgtccatc
ttccccgaggaacaggtgcgtgccgccatggacctctaccccgaggagaccaacccgcag
aaggtgtgcgcggccatcctcgccatgttccccaagggctaa
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