Dermacentor silvarum: 119461855
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Entry
119461855 CDS
T07348
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dsv
Dermacentor silvarum
Pathway
dsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119461855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119461855
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119461855
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Ortholog
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GFIT
Motif
Pfam:
TPR_14
ANAPC3
TPR_19
TPR_2
Motif
Other DBs
NCBI-GeneID:
119461855
NCBI-ProteinID:
XP_037579153
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Position
8:complement(174755343..174761163)
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AA seq
614 aa
AA seq
DB search
MSDKESSSGDGKTTSADNGASLDVCAAVSEQEKQLATSAATDFHAGKYGACLETLDKLYA
LRPADGKVAHNRAVARYYASSKSMEEFDRELVEISPHLTNPDSLDDIDQCIPFFNHAVAL
FHAQQYRRALAVLDRLFQFIEPMDESVARKMCFLHTELCLCLKQPEKALATVAYLENLHA
DSPEAEACRGRLQLYKTRCLIMMRSVKASKREIKNLVGSSAGSSCQTVYLRGQLEFLRGN
YRKAVKVLAAAQQQGDAAVYYHNDLGCVHFCTGKPHLGSYNFAKALNGYVEGCSQGGRTL
DGRLYLELLHNLGLQNLYCGKYASAFDCLVEAARMQPTNARLWLRIAECCVNRHKSDNAA
DFQLKDRKRHMVSGTAGAGPHRKIVLAPGISSDRHSAAVGSAAIPVPTLEFAALCLRNVL
QLLPEEADDALRNSALALAAYVALCLGDPLVALKHAESLLAQPKVAGVHSFLAHQYAAEA
LLLLDRVGDAIDHLNPDLVKDLSHGFSEPEDGANKGKDDATKTGEENGKTYRKPWYPASP
SMAKVVSLYNLAVAYTLRGGLGKATETLRLVSVPKGPDPEIPVQALMLAIYVQLQQGHAD
LAKNIIKQHLPQYK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggaatcgagcagcggcgatgggaaaacaacatccgccgacaacggtgcg
tctttggacgtgtgtgccgctgtgtccgagcaggaaaaacaactggcgacgtcggcagca
accgactttcatgctggtaagtatggcgcgtgcctcgaaacgctggacaagctctacgcg
ttaagaccggcggacggcaaagtggcacacaaccgagcagtggcacgctactacgcgtct
tcgaaaagcatggaggagttcgatcgcgagcttgtcgaaatctcgccgcacctgaccaac
ccggactcgctggacgacatagatcagtgcattccgttcttcaaccatgcggtggccctg
ttccacgcacagcagtaccgtcgagccttggccgtgttggaccgcttgttccagttcatc
gaacccatggacgagtcggtggccaggaagatgtgtttcctccacaccgagctgtgcctt
tgcctcaagcagccagagaaggccctggctactgtcgcgtacctcgagaacctgcatgcg
gacagcccggaggccgaagcgtgccgcggccgcctgcagctctacaagacgcgctgcctc
atcatgatgcgctcggtgaaagccagcaagcgcgaaatcaagaacctggtcggctcgtcg
gcgggcagcagctgccagacggtgtacctgcggggccagctggagttcctgcgcggcaac
taccgcaaagccgtcaaggtgctggccgcggcgcagcagcagggcgacgccgccgtgtac
taccacaacgacctcggctgcgtccacttctgcacgggcaagccgcacctgggcagctac
aacttcgccaaggcgctcaacggctacgtcgaaggctgctcgcagggcggccgaacgctc
gacggccggctctacttggagctgctgcacaacctcggcctgcagaacctgtactgtggc
aagtacgcgtcggccttcgactgcctcgtggaggcggcgcgcatgcagcccaccaacgcc
cggctctggctgcgcatcgccgagtgctgcgtgaaccggcacaagtcagacaacgcggcc
gatttccagctcaaggaccgcaagcggcacatggtgagtggcaccgcgggcgccggcccg
caccgcaagatcgttctggcgcccggcatctcgagcgaccggcactcggcggccgtcggc
tcggccgccatcccggtgcccacgctcgagttcgccgctctctgcctgcgcaacgtgctg
cagctgctgcccgaagaggccgacgacgccctccgcaactcggcgctcgccctggccgcg
tacgtggcgctctgcctgggcgaccccctggtggcgctcaagcacgccgagagcctgctg
gcccagcccaaggtcgcgggcgtgcacagcttcctggcgcaccagtacgccgccgaagcg
ctgctgctgctggaccgcgtcggggacgccatcgaccacctgaacccggatctcgtcaag
gacctgtcgcacggtttttccgaacccgaggatggtgcgaacaaaggaaaggacgatgcc
accaagaccggcgaagagaatggcaaaacctacaggaagccatggtatccggcgtctcct
tcgatggccaaggtggtcagcctgtacaatcttgccgtggcatacactctcaggggtggt
ctgggaaaagctacggagactctaaggctggtcagtgtgcctaaggggcctgaccccgaa
atacccgtgcaggccctcatgttggccatatacgttcagcttcaacagggtcatgccgat
ttggcaaagaatatcatcaaacagcatcttccccagtacaagtga
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