Dermacentor silvarum: 119463381
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Entry
119463381 CDS
T07348
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsv03009
]
119463381
Ribosome biogenesis [BR:
dsv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119463381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Sec7-like_HUS
HEAT_GCN1
HEAT_EF3_N
BIG2_C
Motif
Other DBs
NCBI-GeneID:
119463381
NCBI-ProteinID:
XP_049511319
LinkDB
All DBs
Position
9:complement(95158018..95241479)
Genome browser
AA seq
2772 aa
AA seq
DB search
MKNKPVKHKAENTFRFQSFSERLSNINIDVIHRVGPHRRTTPFESETFVEEALAKWSELN
CTEDYDKLRNDIGSEIHTLPQIVLRKDALLEIIKTQLGNRENKALDAVLDITVALARDLQ
YDFYPSFPEVFRLVCAHLDTRDPEMLERIFVCLSYLFKFLWRYMVRDIDLIFKLYVPLLG
SQQKKYVRDFAAESFAFLIRKVSDKEKLVDMMLAYLEANPQSTDGIGRLLFEAVKGVRGQ
THSCMTVVLPLALKRLDGSVCSGAVACQALRQTFVALAEHLASHAENSSAVWNCLKEVVA
DAVEKYKSDKESVLALLENLATMVKIWVLFKRGLLSRRSDAVYEILDLLLELGEASPALT
ATLLECLASLVTNGGTPVSPSSGPLNKLVEKVYSGSFSAGTVFDFTGQVVECPAFEKDVL
CHVVQHCASFEDRTHALSLLAEVVLQRRPMPGTADELIRSWRPLPLCISGGARQGFLGMQ
PGLHPVAVNGEEQEGGGNLSLTHCQFCRENVVSLAQTVLEALAKDVTDPLLWAGLVCLPH
LSAWGDVVELQKALDRILQELRDRLQLETLPASSAARLSFVFLQAVATAALCKFEGALAN
ITSDVLINILRQSPENVCLLKAADIFLVHAAKRVSPTEQQPKEDLLRSFYSIIERNLASP
HGVVRLLTLRVLSSFGPKASPEPREKDEKLEEFASACHVFNICLSAEAVPLTVQDYRERL
KLLQALSSEQLAAAAVSLGAYSMAPVHYLLGTLLVNFQLLWKPCQEILASHASADGPFWS
TLVQHLTIVYDKIETSVPATSEDQSGVDSLANAGLAGVFDEAQEAATKLADKPDYVNHRH
LLWNAAEQFAGVAERRSRDVVTFFYRFLEKEFWPNMQMAPHHDIRKPEDTPVLPADGVEN
KPENPQEASVIIVGVDEPQDDAEEDENADDREEEDVPVEEVQHIPSRARLKLVRSLCDHL
RLLSKFSNPRAVSKHELLYETYLDLLTFRDPEVQKLAFACIVGYGQKFLTPYRENFERLL
DEASFRSEVVLFNVDDGGEGAVRAEHRTDIVPILMRVLYGKMHTRSGSATGGKSSFSNRQ
GTVLRFLASCQESELGAFMDLELATLKQYLSDGIMDTVNNIRDNLDLSKVVPIRRLHGTL
GTVENMLRHLGALTPGLLPTLLKLLVAVATYAGAILSQKDRVVRAVISNTRVLRSRVIGL
VSQFFERFDTYEFTSAEIDAIFESAVWPQLPHLAELAGKQKPNPLLKFFLALSRNPRYFV
LFAKYKADDLSTSPLPCLVSLLGNSDISPSILKVLLMIIDNILTLREGDHDDVEDGKRAP
PLVVSHCFDVEARRSTAGFPEKSDGEDHYGALLMLPYVPHILHKLKSIVESAVRTQKPLS
PVELNILLRISGLLTNSQQCAELAKLFVVGFKKLRSQAQDSDQQKLATVLNLAKVADNPD
QLLGYTATLFSSLANNQSRRLLCDIYGVVAERVPRFAELASFIAKVNSWNPRFAEEPNYQ
TRLEGFKMAAPLVLGQKEEPDVRIVLAVIYNCTYTIRAVDDLALRDAASHALAQMGPVFQ
AWLKEDRASYEKCVTEALMGEIRQGLRGKSEHSRVEFVRVLSQLLQHCSEHPSLTGLSQL
CCRQDVELDFWENLCHIQLHRRARALNRLAVALRAGELTSLTPPAISGVLLPLSSCYLFN
STYTKQTALVDAAIEAVSSLCSRLPWRHYEANLSRYIQLLQRDTEYHKMAIRLVVAILDA
FHFDLSKSKGIRQKPGAAKPARDAVQAEGATAQGEVEEMEVDTEQTENVDENEVPQVNGE
VEETSVDNKDKALNEDAATAIHTAIATRLLPRLHKVLNQKARADDEHKAAKIRLPEEHEI
LRIPIAVAMVKLLQALPDGMLQRHLPGVFLRICDFLKSRSRDVREAARGTLVKVMSSLGA
PYLKYLFSQMRGVLKRGYQIHVLTYTVHAVLSSMSSGLVSGDLDACFEDIIEVCQAELFS
DIAEEKEVAQIGSKVREAKATKSFAIYNILASVASRDTLRQLTPALLEVLLSTTSHKTVK
KCDDCLHNIVMGLSANKGLPVEDLLIYTYQTISQHAPSLLEKPREPVPEPRLLEEKSDVY
LVPQEPARSGMPVRTSKTANGHVMVEFGLKIVHSILKKEQSGVPDQKQLEMLDPYVGMLA
SFLDSSCVKMVTISLRCFGPLLRMPLPGLRQHMRKLSQSLFVLLHKYSGAGMKQGPNFEL
LVLAFKVMTTLVRDPSLCRLSKQQLLVLLTYVERDVYDHSRQSVAFALLKAILHRRVDTE
ELHDLMDKVATMSIEDEQAHIRGQCREAYLQYVLDYPMKRRMKKAVGFFTAQLEYSTEAG
RLSALEMLDAYSNKFPQHTLSHYAPTLFVPMAACLVNDQSPNVQRVAAAGIRSLLGKLDE
ASRNPLLSVVLAWCKEKMFATRRLGAQTLGLFAEVEKERFERHLADVMPVLVEEMHPDKF
EELTVQDIERAKDHIAFMYLVSLTKIVDACNVARAPATQESFGRLCGYAETYLLYPHDWV
RLAASQFYGRVFAAYTPDEVAAACDPDARAPSSRDYLLVDTPSKVRSLTEKSCSQFQPDN
VLEKIAEQVIRNLVFLTRVSTRATRLGIDTLHPVDWIVKKVSQQAHAEVVSNPRSVVKGL
VAPMCSSILAAISLDLTRPELHSHLQVILTPICRELEDQSPSQNEEMKQMANEATAVIKK
AAGVEAFGAALVALQGKLAGKKLNRKREKALEMVRNPEAGARKKMKLQLRKKEALKRKKS
VQFGKVKRRKAT
NT seq
8319 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaaccggtaaaacacaaggcggaaaacacgttccggttccagtcattctct
gagcggctgtcgaacatcaacatcgatgtcatccaccgtgttggcccccaccgacgaaca
acgccgtttgagagcgaaacatttgttgaagaagctctcgccaagtggtccgaactgaac
tgcactgaagattatgataaactaaggaatgacattggttcggagattcacactttgccc
caaattgtgcttcgcaaggatgcactattggaaattatcaaaacacagttgggaaaccgt
gagaacaaggccctggatgcagtacttgacatcacagttgctttggccagagacctccag
tatgacttctacccgagcttccctgaagtgttccgactcgtctgtgctcaccttgacacc
cgtgaccccgaaatgctggaacgcatcttcgtctgcctctcatacctgttcaagttcctc
tggcggtacatggtcagggacatcgaccttattttcaaattgtatgttccacttctcggg
tcacagcaaaagaagtatgttcgggactttgccgccgagagctttgcattcctgatccgc
aaggtctccgataaagagaaacttgttgacatgatgctggcctaccttgaagctaaccca
cagagcaccgacggtattggtcgcctgctgtttgaagccgtcaagggagtcagagggcaa
acgcacagttgcatgaccgtggtgttgcccttggcactgaagcgtctggatggctcggtg
tgcagtggggcggttgcgtgtcaagccctccggcagacgtttgttgcactagctgaacac
cttgcgagccatgcagaaaactcgtctgccgtctggaactgtctcaaggaggtcgtagca
gatgcagttgaaaaatacaaatctgacaaggagtccgttctggcactactggaaaacctg
gccacgatggtgaaaatttgggtgctgttcaagaggggactgttgtcgcggaggagtgat
gcagtctacgagatcctggatctgctccttgagcttggtgaggcatcaccggcactgaca
gcgacactcctggaatgcttagcttcgctggtaacgaatggtggtacccctgtgagccca
tcctctggacctctcaacaaacttgtcgaaaaggtctattccggatcattctcagccgga
actgtgttcgactttacgggtcaagttgtggaatgcccggcttttgaaaaggatgtgctg
tgtcacgtggttcagcactgcgcgagtttcgaagaccggactcatgcgctttcccttctg
gccgaggtggtccttcagaggaggcccatgcctggcacggccgacgagctgatacgatcc
tggaggccgctacctctctgcatctcgggtggtgcaaggcaagggtttcttggcatgcag
cccggcctacatcctgtagcggtgaatggagaggaacaggagggtggtggtaacctaagc
ctgacacattgtcaattctgcagggaaaatgtggtctcgcttgcacagaccgttctcgaa
gccttggccaaagacgtgactgaccctctgctttgggctggtttagtctgtctgcctcat
ctcagtgcttggggtgatgtggtggagttacaaaaagctctggatagaattctccaagaa
ctccgagatcgtctgcagcttgaaacactgcctgcgtcgtctgctgcacgcctgtcattc
gttttccttcaagctgtggccactgctgccttgtgcaagttcgaaggtgctctggccaac
atcactagcgacgtcttaataaacattctcaggcaatcgccggaaaatgtgtgcttgctg
aaagcagcagacatcttcttggtccatgcagccaagcgagtgtcgcctacagaacaacag
ccgaaggaagatctgctgaggtcattctacagtatcatcgaacggaacctggcctcaccg
cacggtgttgtgaggctcctgaccttacgggtgttgtcttcgtttgggcccaaggccagt
cccgaacctcgcgaaaaggatgaaaagctggaggagtttgcctcagcttgccacgtcttc
aacatctgcctctcggcggaggctgtgcccctgacggtgcaggactatcgcgagaggctc
aagctgcttcaggcgctgagttccgagcagcttgcggcagccgctgtgtcactgggtgct
tactcgatggctcccgtgcactacctgctgggcaccctcctcgtcaacttccagctgctc
tggaaaccatgccaggaaatcctcgccagtcatgccagcgccgacggtcccttctggagc
acgctggtgcagcacctgaccattgtgtatgacaagatagaaacttctgtccccgcgaca
tccgaagaccagagtggcgtggacagtttggccaacgcgggacttgccggcgtctttgac
gaagcacaggaggcggccaccaagttggccgacaagccggactacgtcaaccaccgccac
ttgctctggaatgcggccgaacagttcgccggagttgcggagagacgcagcagggatgtc
gtgacattcttttaccgatttctggaaaaggagttctggccaaacatgcaaatggcaccg
catcacgacatacggaaaccagaagacactcctgtgttgcctgctgacggcgtggagaac
aaaccagagaatcctcaggaggccagcgtcatcatcgtaggcgtagacgagccgcaggac
gacgcagaggaggacgaaaatgcagacgacagggaggaggaggacgtgccggtcgaggag
gttcagcacataccttcgcgagcaaggctgaaacttgtcaggagcctgtgtgaccacctg
aggcttttgtcgaagttctccaacccgcgagcagtttcgaagcatgagctcctttacgag
acgtaccttgatctgctgacgtttagagatccagaagtccagaaacttgcatttgcctgt
atcgtcggctatggccagaagttcctgaccccctacagggagaactttgaaaggcttctg
gatgaggccagctttcgttcagaagttgttctcttcaatgttgatgacggtggagaagga
gcagtacgggcggagcaccgaacagacatcgttccaatcctgatgagggtgctctacggc
aagatgcacacacgctctggttcggcgactggaggcaagagcagcttcagcaatcgccag
ggcactgtgctgcggttcctggcgagttgccaagagtctgaacttggtgcattcatggac
ctcgagctggcaaccttgaagcagtacctgtcggatggcattatggacactgtgaacaac
atacgggacaacctggatctttccaaagtggtgccgattcgtcgccttcatggcacatta
ggcacagtagagaacatgctgcggcacctgggggctctgacacccggcctgctgcctacg
ctgctcaagttactggtcgccgtggccacctacgctggagctatcctctcgcagaaggac
cgggtggtgcgtgccgtcatcagcaacacgcgagtcctgaggtcacgggtgatcggcctt
gtttctcagttctttgaacggtttgacacgtacgaattcacgtcagctgagatagacgcc
attttcgagtcggctgtgtggcctcagctgcctcatttggccgagttggccgggaagcag
aagcccaaccctctgcttaagttcttcctcgcactaagccggaatcccaggtactttgtg
ctgtttgccaaatacaaggctgacgacctgagcacgtctccgctaccgtgtctcgtctcg
ctcctgggcaactcggacatctcaccatccatcctcaaggtgctcctcatgatcatcgac
aacattctcacgctccgtgaaggtgaccatgatgacgtggaagatggcaagcgtgcgccg
ccactggtggtgtcacactgctttgacgttgaggcacgacgctctactgctggatttccc
gaaaaatctgatggcgaggatcactatggggcactgttgatgttgccatacgttccccac
atactgcacaagctgaaatccattgtggaaagtgctgtgcggacccagaagcccctgtca
cctgttgagctgaacatcttgctgaggataagtggactgctgacaaactcgcaacagtgt
gccgagttggcaaagcttttcgtcgtcggatttaagaagcttcgaagccaagctcaggat
tccgaccagcagaaactggcgaccgtcctcaacttggctaaggttgcagacaatccggac
caactgttggggtacaccgccactctcttctcgagtctcgccaataaccagtcgaggcgt
ctcttgtgcgacatctatggtgtcgtggccgaacgggtcccgcgtttcgccgaactggca
tcgtttatcgccaaggtgaactcctggaatccaaggtttgcagaggaaccaaattaccag
acgaggctggagggattcaagatggcggcgcccttggtgctgggacagaaagaggagcca
gacgtccgcatcgtgctggccgttatctacaactgcacatacaccattcgagctgtggat
gaccttgccctcagggacgccgcgtcccatgccctggctcagatgggcccggtgttccag
gcctggctgaaggaggacagggcatcctatgagaagtgtgtcaccgaggctctgatgggc
gaaattcgtcaggggctgcgtggcaagtcagagcacagccgcgtggaattcgtgcgcgtg
ctgtcgcaactgttgcaacactgtagcgagcacccgtccctgaccggacttagccagctg
tgctgcaggcaggacgtggagcttgacttctgggagaacctctgtcacatacagcttcac
cgacgtgcaagagccctgaaccggctcgcagttgccttgagggcgggcgagctgacctcg
ctgacgccgccagccatctctggcgtgctgcttccgctgagctcgtgctacctgttcaac
agcacgtacaccaagcagacggccctggtggatgcagccatcgaggcggtgagctcgctc
tgctcgcggctgccgtggcgtcactacgaggcgaacctgtcgcgctacatccagttgctg
cagcgggacacggagtaccacaagatggccataaggttagtggtggccatcctagacgca
ttccactttgaccttagcaagtccaagggaatccgacagaagcctggagcagccaagcca
gctcgggatgcagtgcaagctgagggtgcgactgctcaaggagaggttgaagagatggag
gtggacaccgaacagactgaaaacgttgacgaaaatgaagtcccccaggtgaatggggag
gtggaagagacgtcggttgacaacaaggacaaggccctcaacgaagatgcagccacggcc
attcacacagccatagccactcggctcttgccaagacttcacaaagtcctgaaccaaaag
gcccgggcggatgatgagcacaaggctgccaagatccgcctccccgaggaacacgagatt
ctgcgaatcccgatagctgtggccatggtcaagcttctccaagcgctgcccgacggcatg
ctgcaaaggcacctgccaggcgtattcctcaggatctgtgacttcctgaagtcgcgttct
cgagatgttcgggaagcggctcggggcacgctggtgaaagtgatgtcatcgctaggcgcc
ccttacctcaagtacctgttttcccaaatgcgtggggtgctcaagagaggataccagatt
cacgtgctgacgtacacggtacatgccgtgctctcctctatgtcatctggacttgtcagt
ggagacttggatgcctgctttgaagacatcattgaggtctgccaggccgagctgttttca
gacattgccgaggagaaagaagtggcccagatcggcagcaaggtcagggaagccaaggcc
accaagagctttgccatctacaacatcctcgcctctgtggcctccagggacaccctgcgc
cagctgactccggcgctcttggaggtcctgctgtccacgacgagtcacaagactgtaaag
aagtgtgatgattgcctgcacaacattgtcatgggtctctccgcaaacaaaggcttacct
gtggaggacctgctcatctacacgtatcagaccatcagccagcatgctcccagcctcctt
gaaaagccccgcgagcccgtgccggaaccgcggttgctcgaggagaagtcggacgtgtac
ctggtgccgcaggaaccggctcgcagcggtatgcccgtgcgtaccagcaagaccgccaac
ggccacgtgatggtcgaattcggcctcaagattgtgcattccattttgaaaaaggagcag
tcgggagtgcctgatcagaaacagctggaaatgctggacccatatgttggcatgttagcc
agtttcttggactcgagctgcgtgaagatggtgacaatatcgctgcgatgctttggaccc
ctcctgaggatgcccctgcccggcctccggcagcacatgcgcaagctgagccagtcgctg
tttgtgctgctgcataagtactctggtgccggcatgaagcagggaccgaatttcgagctc
ctcgtcctcgccttcaaggtgatgacgacactggtgcgggacccctctctgtgccggcta
agcaagcagcagctcctggtgttgctgacgtacgtcgaacgtgacgtgtacgaccactcc
aggcagagcgtggccttcgccctgctcaaggccatcctccaccgaagagtggatactgaa
gagctgcacgacttgatggacaaggtggcgaccatgagcatcgaagacgaacaggctcac
attcggggccagtgtcgtgaggcctacctgcagtacgttctcgactacccgatgaagagg
cgcatgaaaaaggcggtgggcttcttcacagcgcagctggagtacagcaccgaggcaggc
cgcctctcggctctcgagatgcttgatgcctactcgaacaagtttccacagcacacgctg
tctcactacgcgcccaccctgttcgtgcccatggcagcatgcctcgtcaacgaccagtca
ccaaacgtgcagcgggtcgctgcagccggcatccggagcctcctcggcaagctggatgag
gcatccaggaaccctttgctctctgtggttctggcatggtgcaaggaaaaaatgtttgcc
actaggcgattgggagcacagacactgggcctgtttgccgaggtagagaaggagcgtttc
gagcgtcacctggctgacgtgatgcctgtcctagtcgaagagatgcaccccgacaagttc
gaagagctcacggtgcaagacatcgagcgtgccaaggaccacatcgccttcatgtacctg
gtctcgctgaccaagatagttgacgcctgcaacgtggcacgggctcctgccacgcaggaa
agctttgggaggctgtgcggttatgccgagacgtacctgctgtatccccatgactgggtg
aggttggcggcatctcagttttatggccgggtgttcgcggcatacacaccggacgaagta
gcggcagcatgcgaccctgacgctcgggcgccttcttcccgggactatttgttggtcgac
acgccgtcgaaggttcgaagcctcacggagaagtcctgctctcagttccagccggataat
gtcctggaaaagatagctgagcaggtcattcgaaaccttgtgttcctgactagggtgtcg
acgcgtgccacgcgtctaggcattgacaccttgcaccctgtcgactggatcgtgaagaag
gtgtcgcagcaggcccatgcagaggtggtgtcaaacccacggtctgttgtgaagggtctt
gtcgctcccatgtgttcaagtatcctggctgccatcagcctggacctgactcggccagag
ctgcactcgcatctgcaggtcattctgacgcccatctgtcgagagctcgaggaccagtcg
ccaagccagaatgaggagatgaaacagatggcaaacgaagcaacggctgtcataaagaag
gcggcgggcgtggaggcattcggcgccgccctggtggcactgcagggaaagctggccggc
aagaagttgaatcgaaagcgggagaaggccctggagatggtcaggaaccccgaggcagga
gcccgcaagaagatgaagctgcagttgaggaagaaggaagccctgaagcgcaagaagtct
gtacagtttggcaaggttaagaggcggaaggcgacctga
DBGET
integrated database retrieval system
