KEGG   Dermacentor silvarum: 119463446
Entry
119463446         CDS       T07348                                 
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
dsv  Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dsv04812]
    119463446
Cytoskeleton proteins [BR:dsv04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     119463446
SSDB
Motif
Pfam: WD40 WD40_Prp19 Katanin_con80 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_HPS5 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_SPT8 Beta-prop_RIG_2nd eIF2A Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_DCAF12 Beta-prop_VPS8 PEP5_VPS11_N Beta-prop_IP5PC_F Beta-prop_LRRK2 Ge1_WD40 VPS8_N WDR54 Cytochrom_D1 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 119463446
NCBI-ProteinID: XP_049524178
LinkDB
Position
1:complement(54438859..54610741)
AA seq 828 aa
MTTGLVAAFPPVPMAPLGSLAGGRPLPWLQLETTSYCVGVEEFVAHGSTVKCLAIGRKSG
RVMVTGGEDNKVNLWAIGKTNCIMSLTGHTTAVECVKFCPAEEMVCAGSTSGTVKIWNLE
AAKMVRTLTGHKGNVRCMDFHPHAEFLASGSMDTTIKLWDTRKKGCIYTYKGHNKCVNSL
KFSPDGRWIASGSEDGSVKLWDLPAGKMLSEFRDHCGPVNDVDFHPNEFLLASGSSDSTV
KFWDLENFNLVSSTEGDSGVVRCVFFNPDGACLFSGAEDFLKVYCWEPVKTCDTLVMGWN
RVADISVAQNQLIAGAFSLTNVAVYVIDLNRVQPFGGMPNNSTVPQYITPSPFKAGSHIR
RSFSKDKKDAADFQVMHMKPLDDGDTFPLETEGEADIKDFRDYNKIFHPSQESSLETLVE
NGMSRTPPKDNPFPAPPEDTYRPALEPQSSKVVRLSGASNPCVLTERPGATVKETRQLSV
TTSYSAMGTTFTIRPRGSLVGSGALLAPDPPTPSIMAAIPGYSSVGVVPSNIPVPASVLP
SKVTSRAMPTGPISAIATSLGKPIEKATAMVRTSSSQVVESSSTVSIVRPVMSVLPDSKE
ALAPPQKAVVHPEQKQPVDFVPSQRDTPAGLDLDEFLPRHLQASLRLGSAGIPDMSEAEA
LSTIAEQHKTLLAVLHHRLKNIKIVLAQWSTKDPKMALDTAINMKRPSLLVDVLNIVVLR
PQIWTLDMCQTILPAIFDLLQSKYESYMSTGCACLRILLKNFASVIKTNITAPPGVGVDI
SREERYNKCMSCYNQLLSIRSFLLKRQTMQGKLGHLFREMHILMQGLE
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgacgacgggcctcgtggctgcgttcccgccggtgcccatggccccgctcgggagcctg
gccggcggccggccgctgccctggctccagctcgagaccacctcttactgcgtcggcgtc
gaagagttcgtcgctcatggctcgacagtcaaatgcctcgctattggccgcaaatctggc
cgtgtcatggtcaccggcggcgaagacaacaaggtcaacttgtgggccattggcaagacc
aactgcatcatgagcttgactggacacacgacggcggtggaatgcgtcaagttctgtcca
gccgaggagatggtgtgcgcgggctccacatcgggaacagtcaagatctggaacttggaa
gctgccaaaatggtccggacactcacaggtcacaagggaaatgtgcgatgcatggatttt
caccctcacgcagaatttttggcatcagggtcaatggacactactataaagctttgggat
acaagaaaaaagggatgtatatacacttacaagggtcacaacaaatgtgtgaatagcctc
aagttcagtcctgatgggcgatggattgcatcagggagtgaggatggcagcgttaagctt
tgggacctgcctgcaggcaagatgctgtcagagtttcgggaccattgtgggcctgtaaat
gatgtcgacttccaccctaatgagtttctcctggcaagtggcagctcagacagcacagtc
aagttctgggacctggagaacttcaatcttgtctcttctactgagggtgactctggtgtt
gtcaggtgtgtcttcttcaaccccgatggtgcctgcctttttagtggtgcggaagacttc
ctgaaggtttactgctgggagcctgtaaaaacatgtgacactctggtcatgggatggaat
agagtggctgacatttctgtcgctcaaaaccagcttattgctggagcattttccttaaca
aatgttgctgtatatgtgatagacctcaatagggttcaaccatttggagggatgccaaat
aactctaccgtgcctcagtacattacccccagccctttcaaagcagggtctcatatccgg
agaagcttctctaaagataagaaggatgcagctgactttcaagtgatgcatatgaagcct
ttggatgatggtgatacttttccattggagacagaaggtgaagctgacatcaaagatttc
agggactacaacaaaatattccacccatcacaggaatcatctctggagacattggtcgag
aatggaatgtcacgcactccacccaaggacaatcccttccctgcgccccctgaggacacg
tacaggccagccctggagccacagagcagcaaggtggtgcgattaagtggtgcctcaaat
ccgtgtgtactcacggaaagacctggagccacagtgaaagagacacggcagctgagcgtc
accaccagctactcggctatgggtacaaccttcacgatacgacccaggggctcattggtg
ggctcaggggccctgctggcaccagacccaccaacacctagcataatggcagccatacca
ggctacagctctgttggagtggtgcccagcaacatacctgtgccagcaagtgttcttccc
agcaaagtaaccagtcgcgccatgcccacgggtccaatctctgccattgcaaccagctta
gggaagcctattgagaaagccactgccatggtgcgcacgtcatcatcacaagtagtggaa
agcagctcaacagtttcgatagttcgccctgtcatgagtgtgctgcctgacagcaaagaa
gccctggcaccacctcaaaaagcagttgttcaccctgaacagaagcagccagtggacttt
gtgccttcacagagggacactccagcaggcctggaccttgatgagtttcttccgcggcat
ttgcaagcaagtttacgcctgggcagtgctggtatcccggacatgtcggaggccgaagcg
ttaagcacaattgctgagcagcacaagactctcctggcagtgctacaccatcgtctaaag
aatataaaaattgttttggcgcagtggagcacaaaggatcccaagatggcacttgataca
gcaataaatatgaaacgacccagtctacttgtagacgttctcaatattgtagttttaagg
ccgcaaatatggaccttagatatgtgccagacaatactgcctgctatttttgatctactt
caaagtaaatatgagtcgtacatgtcaaccggttgtgcctgtctccgcatcctgctcaag
aacttcgcctccgtcatcaagacgaacataacagcaccgcctggtgtaggggtggacatc
tccagggaagaaaggtacaacaagtgcatgagctgctacaaccagctgctctccatccgg
tcgtttctgctcaagcgccagacgatgcaaggaaagcttggtcacctcttccgcgagatg
cacatcctcatgcagggcctcgagtga

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