Dermacentor silvarum: 119464315
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Entry
119464315 CDS
T07348
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dsv
Dermacentor silvarum
Pathway
dsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119464315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119464315
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119464315
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119464315
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119464315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
119464315
NCBI-ProteinID:
XP_037581157
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All DBs
Position
1:62048738..62053923
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AA seq
283 aa
AA seq
DB search
MEEIVGKVGNVVFELEMALEQQLGALPLPFPGMDKSGAAVCCFYVQGNCSKASACPFRHV
KGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHIDPEAK
IKDCPWYDRGFCRHGPNCRHRHTRRVMCINYLCGFCPDGPECKFMHPKFDLPIQDPAQQA
KKANIVCHYCGEAGHKAISCHKMPAELREEQQHSRMQFHNHYGGMHRRDHEDGGGPNAGG
QRGFRPLDQVTCYKCGEKGHYANKCPKGHLAFLSSALQNTPNV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatagtaggcaaagtaggaaatgttgtcttcgagctcgagatggccctggag
caacaactcggcgcgctgccactgccgttccctggtatggacaagtccggagcagccgtg
tgctgtttttacgtgcagggaaactgtagcaaagcatctgcatgcccttttaggcatgtt
aagggtgaccgaacagtggtctgtaagcactggctgcgaggcctttgcaagaaaggtgat
caatgcgagtttctccacgagttcgacatgacgaaaatgccagagtgttacttctattcg
cgtttcaacgcgtgcagtaacaaagagtgtccatttctacatatagatcccgaagcaaaa
atcaaagattgtccttggtatgaccgaggcttttgtcggcacggcccgaactgtcgccac
cgacacacacgacgcgtcatgtgcataaactacctttgcggattttgtcccgatggacct
gagtgcaaatttatgcatccgaagtttgacttacccattcaggacccagcacagcaagcg
aagaaggccaacattgtatgccattattgcggtgaggcaggacacaaagcaatatcctgc
cacaaaatgccggctgaactgcgagaagagcagcagcactcccgtatgcagttccacaac
cactatggtggaatgcaccgacgtgatcacgaagacggcgggggcccaaacgctggagga
caacgaggcttcagaccactggaccaagtcacttgctacaagtgtggggagaaaggacat
tatgccaacaagtgcccaaagggacatttagctttccttagcagtgcacttcaaaacaca
ccgaacgtgtag
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