Dermacentor silvarum: 119464319
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Entry
119464319 CDS
T07348
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dsv
Dermacentor silvarum
Pathway
dsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119464319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119464319
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119464319
U7-dependent histone pre-mRNA processing factors
119464319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
119464319
NCBI-ProteinID:
XP_037581158
LinkDB
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Position
9:131173952..131227737
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AA seq
738 aa
AA seq
DB search
MTSIIKLHAISGVQDESPQCYLLQVDEFKFLLDCGWDEFFSLQAVKEMKKHASQVDAVLL
SFPDCGHLGALPYLVGQCELKCPIYATVPVYKMGQMFMYDLFQSRHNMEDFTLFTLDDVD
AAFDKIIQLKYSQTINLKGKGQGLSITPLPAGHMIGGTVWRIVKDGEEDIVYAVDFNHKK
ERHLNGCALETISRPSLLITDCYNANYMQARRRTRDEQLMTNILQTLRNGGNVLVAVDTA
GRVLELAHMLEQLWRNQDSGLMAYSLALLNNVSYNVVEFAKSQVEWMSDKVMRSFEGARN
NPFQFRHLQLCHGMAELARVPEPKVVLASMSDMECGFSRELFIQWCSSPRNSVVLTSRSA
PGTLTRQLIENPHQQSLTITVKKRVRLEGSELEEYMRKEKELAAARHKAERDTELDASDS
SEESDDDMDIDEKKPLPEPKGEAKSKSMGFFKQAKKSYLMFPVKEEKIKWDDYGEIIRPE
DFVVVDKTAQEEEADEKKAEDDDLMQDVTEVPTKCLESSLQLDVNASLQFIDFEGRSDGE
SVRKIVQMMKPQRVILVRGSPEATQAMAAFCRSSGSVQGRVFTPRLGEVVDATTESHIYQ
VKLRDSLVSSLQFARAKNAELAWLDGEIATEEHLAPDGTRDDGIEEDESRESMYILQPLP
PSQVPGHATIFVNELKLSDFKQVLLRNGVQAEFSGGVLYCNGIVAVRRNEAGRINIEGCL
CEDYFKVREILYQQYAII
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattatcaaactgcacgccatttcgggcgttcaagatgaatcgccgcagtgc
tacctcctgcaagtggacgaatttaagttcttgctcgattgtggctgggacgagttcttc
agcttgcaagctgtcaaagaaatgaaaaagcatgcaagccaggtggacgcagtacttctt
tcatttcctgactgtggacacctgggggcgctgccatacttggtggggcagtgtgagctc
aagtgtcccatctatgcaactgttcccgtctacaagatgggccagatgttcatgtacgac
ttgttccagtcacgccacaacatggaggactttactctcttcaccctcgatgatgtcgac
gctgccttcgacaaaatcattcaactcaagtacagccaaacaatcaatctcaaaggcaag
ggccagggcctgtccatcactccgcttccagccggtcacatgattgggggaacagtgtgg
cgcatagtcaaggatggcgaggaggacattgtgtacgcagtggacttcaaccacaagaag
gagcggcacctcaatggctgtgcccttgagaccatcagccggccctctctgctcatcacg
gactgctacaatgcaaactacatgcaggcgcgccgaaggacgcgcgatgagcagctcatg
accaacattctccaaactctgcggaacggtggcaacgttctagtggccgtcgacaccgcc
ggccgtgtcctcgaactggcccacatgctggaacaactctggcgcaaccaggattctggc
ctgatggcctactctctggccctcttgaacaatgtcagctacaatgtggttgagtttgcc
aagtcacaggtggagtggatgagcgacaaggtgatgcgctccttcgagggtgcgcgcaac
aatcccttccagttccgacacctccaactttgccacggcatggcagaactcgccagggtc
cccgagccaaaggtcgtgctagccagcatgtcagacatggagtgcggcttctcacgggag
ctcttcatccagtggtgcagcagcccgcggaacagcgtggtgctcacaagccgctcagca
cccggcacactgacacggcaactcatcgagaatccgcaccagcagtcactcactatcacg
gtcaagaagcgtgttcgcttagaaggttctgaacttgaagaatacatgcgcaaggagaaa
gagctggccgcagcacggcacaaagctgaacgtgacacggagctcgacgcttctgactcg
agtgaagaaagtgacgacgacatggacattgatgagaagaagccactgcccgagccaaaa
ggagaggcaaaatccaaaagcatgggcttcttcaagcaggccaaaaagtcatacctcatg
tttccagtgaaggaagagaaaataaagtgggacgactacggagaaataatacggcccgaa
gactttgtggtcgtcgacaagacagcacaggaggaagaggccgatgagaagaaggccgag
gatgacgacctcatgcaggacgttacagaggttccgaccaagtgcctggagagctccctg
cagttggacgtgaatgcttcgctgcagttcattgacttcgagggccgctccgacggcgag
tcagtgcggaagattgtgcagatgatgaaaccgcagcgtgtaatcctggtgcgcggtagt
cccgaggctacacaggccatggctgccttctgccgatcgtcgggctctgtccaaggccgc
gttttcaccccgcggctaggcgaggtggtagatgcaacaacagagtcgcacatctaccag
gtgaagctgcgtgactcgctagtgagttccctgcagtttgcgcgagccaagaatgctgag
ctggcttggcttgacggcgagattgcgacagaggagcacctggctcccgatgggacccgt
gacgacggcatcgaagaagacgagagtcgtgagagcatgtacatacttcaaccattgcca
cccagtcaggtaccgggacacgcgaccatctttgttaacgaactcaaactctcagatttc
aagcaagtgcttcttcgcaacggtgtccaagctgaattctccggtggagtcctgtactgc
aacggcattgtggcagtgcgaaggaatgaagccggccgaatcaacattgaaggttgtttg
tgcgaagactacttcaaagtgcgtgaaatcctttaccagcagtatgccatcatctag
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