Dermacentor silvarum: 119464431
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Entry
119464431 CDS
T07348
Name
(RefSeq) protein PAT1 homolog 1-like isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dsv
Dermacentor silvarum
Pathway
dsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119464431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119464431
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119464431
mRNA degradation factors
5'-3' decay
Decapping complex
119464431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
119464431
NCBI-ProteinID:
XP_049512319
LinkDB
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Position
9
Genome browser
AA seq
840 aa
AA seq
DB search
MSKGFLAFRKESQGLHPLSHEDELLTAEVEDDYDALNDETFGGGLDDGWEEVHEKFAELE
DRARHPLDSSSVVDSLVDEDPLSLNQDVVEQSISHLGLEDDRDDDPAIKSYSKSTTSPWP
IEWGRPCSSPPPPAILQQFGGSPKTETIWTPKAGYPPADDRLSSLIWKLQQQSSTQVLPQ
AVPGKSSLPPNVHMLEELERDMLYSGGSHPVSIGSPPGESPWGAVHPEHEAGSPYSGVAT
SPGKRGSSEHSTGVLPAFNTQPKPAQFRFSPGRPLYPPPSVQAGAVPLPTQLGMSPPART
PGLVHGRMSPGIHSAGFGSRLPMPPVPHPMLGRGRVMMGPPPSVLLNNAMQSQMPLQGNL
PFRPGFSTMDLRRLLYPRQVQHPLLNKNHFASLPGNAHYQRHAYQTVFGQGSLPYDSPRQ
PSHHSYLQPQLHGNLDHRDNSNSFSGEQSDDPYAGLMTQKEKDWLVKIQLLQVQPENPDV
DDYYYVMFTKKKAEQQELPGVDGGDVDKLKFIRPERVRTESKSYTPIQFERSLGKLQVVS
VNYPRKILDMGVQRLSEDEDRKVPPDRHLLWFRQLLLDIEKLYSAVLEFEDSSCSAERRA
EIAEKLFSEVQPSEERFVQMVGVRKGRSLVLRVLPKLKAEHQVATLAALLRHLSWLQRKD
RHDGTLERGLLSAMVVIEHATLNDLIQLAASLLMNPDAAFPSTFALRVAWAIVVRAEHHF
QCEETSQSFFNEVHKKWAKLLSEMVDLLIASLKKHDIGEDDASVESKYDSAVLLLFPHER
QALASQLRRFAINSQLASELSCTSAAKPTHQAEIQLHHEQNGFGDKAALPCCGEPVTAVD
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaggatttttggctttccgcaaggagtcccaggggctgcatccgctgagtcat
gaggatgagcttctcacggctgaagttgaggatgactacgatgcgctcaacgatgagact
tttggagggggtctcgatgacggctgggaggaagtgcacgagaagtttgctgaactcgaa
gatcgtgccagacacccattggactcctcctccgtggtggattcactggttgatgaagac
cctctttcgttaaaccaggatgtggtagagcaaagcatctcccaccttggtctggaagat
gaccgggatgatgacccagctatcaagtcttactccaagtctacaacatcaccgtggccc
attgaatgggggcgcccctgttcgtcaccaccaccgccggcgattctccaacagtttggc
ggttccccgaagacggaaacaatctggacaccgaaggcaggatatccacctgctgatgac
agactttcttccctcatatggaaactacagcagcaaagctccacacaagttttgccccag
gccgttcctgggaaatcatccttgccccccaatgtgcacatgttggaagagctggaaagg
gatatgctgtattctggtggcagccatccagtgtctattgggagccctcctggtgagtcg
ccctggggggcagttcatcctgaacatgaggcggggtcgccgtactctggtgtggccact
tcgcctggaaaacggggatcatcagaacacagcactggagtcctgcctgctttcaacacc
cagccaaaaccagcacagtttcgtttcagcccgggccgaccactgtacccaccccctagt
gtgcaagctggtgctgttcccttgcctacccagcttggaatgtcgccccctgccaggaca
ccaggacttgtccatggccgcatgtcaccaggaattcattcagctggctttggaagccgc
ctgccaatgcctccggtgccccatcccatgctagggcgggggagggtcatgatgggccct
cctccatccgtgttgctcaacaacgcaatgcaaagccagatgccactgcaaggcaacctg
cctttcagacctggattcagcactatggaccttcgacgcctcctctaccctcggcaggtt
caacacccgcttctgaataagaaccactttgcatcattacccggaaatgcacactaccag
cgacatgcataccagactgtgtttggccagggcagcctgccatatgacagccctcggcag
ccatctcatcactcgtatctacagccacaactgcatggcaatttggatcaccgggataat
agcaactcattttctggcgagcaatcagatgacccttatgcggggctcatgacacagaaa
gaaaaggattggttggtcaagatccagctgctccaagtgcagcccgagaacccagatgta
gatgattactactatgtgatgttcactaaaaagaaggctgaacaacaagaacttccaggt
gtggatgggggcgatgttgacaaattgaaattcattcgaccagaacgagtgcgcacagag
tcaaaaagctacacaccaatccagtttgagcggtcacttggaaagttacaagtggtgagc
gtcaactacccaagaaaaatccttgacatgggtgttcaacggctctctgaagatgaagat
cgtaaggtccctccagatcgtcacttgttatggttccgccaacttctgcttgacatagaa
aagctctactctgccgttctggagtttgaggatagcagctgttctgcagagcgtcgggca
gaaatagccgaaaagctgtttagtgaggtgcagccctcggaagagcgcttcgttcaaatg
gtgggtgtgcggaaaggccgctccttggtgcttcgggtgcttccaaagttgaaagctgag
caccaggtagcaacattggcagccctgctgcgccacttatcatggttgcagcgcaaggac
aggcatgatggcacactggaaagagggctgctcagtgctatggtagtcattgagcacgcc
acccttaatgacctcatccaactggcggccagcttgctcatgaatccggatgctgcattt
cccagcacatttgctctccgtgtggcctgggctattgtagtgcgagcagaacaccatttt
caatgtgaagaaaccagccagtcattctttaatgaagtgcataagaaatgggcaaagctg
ctttctgaaatggtggatttgctcattgcctcactcaagaagcatgacattggcgaagac
gatgcaagcgtcgaaagtaaatatgactctgcagtgcttctgctgtttccacatgagcgt
caagcccttgcgtcacagctgcgacgctttgcaataaactctcagcttgctagtgaactg
tcctgcacttctgctgcaaagcccacgcaccaggcagagattcaattgcatcatgagcag
aatggatttggtgacaaagctgcattgccctgctgtggtgaacctgtaacagctgtcgac
taa
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