Dermacentor silvarum: 119464476
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Entry
119464476 CDS
T07348
Name
(RefSeq) cleavage stimulation factor subunit 3-like isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
dsv
Dermacentor silvarum
Pathway
dsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119464476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119464476
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119464476
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
KorB
Motif
Other DBs
NCBI-GeneID:
119464476
NCBI-ProteinID:
XP_037581394
LinkDB
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Position
9:144700366..144770517
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AA seq
763 aa
AA seq
DB search
MFSGPGSKRESLPQMEGYIPDRVKNAEKRLEQNVYDVEAWSILLRDAQNKKVEEARPLYE
KIVTQFPNAGRYWKIYIEHEMKSRNFERVEKLFQRCLMKVLNIDLWRCYLTYVKETKGSL
PTYREKMAQAYDFALDKMGMDILSYPVWSDYINFLKSVEAVGSYAENQRITAVRKVYQRG
IINPMMNIEQLWKEYINYEQGINMLIAEKMISDRSREYMNARRVAKEYEAVTRGLNKNSP
SVPPQGTPEEAKQVELWKKYIAWEKSNPLRTDDHALITKRVMFAYEQCLLCLGHHPDVWY
EAALFLEQSSKLLTDKGDLNAGKLFSDEAAAIYERATTTLLRKNTLLYFAYADFEESRMK
HDKVHQVYNKFIEIPDIDPTLAYVQYMKFARRAEGIKTARVVFKKAREDARSGHQVYVAA
ALMEYYCSKEKTVAFKIFELGLKKYGDNSDYIMAYVDYLSHLNEDNNTRVLFERVLTSGS
LPPEKSVEIWNRFLEFESNIGDLSSILKVEKRRAAAIEKLKEFEGKETALLVDRYRFMDL
YPCSPQELKSLGYRDVTRLPVVVSSAPASKREVREETATDKQNPVFPRPDTGQMIPFKPK
QICPTGAHLVPGGVFPPPPAASELMMRLPPPHCFMGPFAAVDELMEVFRNMNLPEKPPRP
SENGVSKDHLKLFEHSQAASLQSGNPGGGGGVKRKHRDGAAAGVGGGTNAGGAGAEESEE
EDGGLAPPAHDIYRSRQQKKSHTSSMDRRNKEWWPTQEAVMTI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgttttctggacctggttcgaagcgcgaaagcctgcctcaaatggagggatacattccg
gacagggtgaaaaacgctgagaagcggctcgaacaaaatgtctacgacgtggaagcctgg
agcattctgcttagggacgcacagaacaagaaagtcgaggaggctcgaccactctacgag
aagatagtcacgcagttccccaatgccggccgctactggaagatttacattgaacacgag
atgaagtcaaggaatttcgagagagttgaaaagctgttccagcgttgtctcatgaaggtg
ctcaacattgacttgtggagatgctacctcacgtatgtcaaggagaccaagggatcgttg
ccaacctacagggagaagatggcgcaggcatacgactttgcgctcgacaagatgggcatg
gacattctctcgtaccccgtctggagtgactacatcaacttcctcaagagcgtagaggcg
gtggggtcatacgcagagaatcagcgcataacagccgtacgcaaggtctaccagcgaggc
atcatcaatcccatgatgaacatcgagcaactctggaaagagtacatcaattatgaacag
ggcatcaacatgctgattgcagagaagatgatctctgaccgtagtcgagagtacatgaac
gcgcggcgtgtggccaaggagtacgaagcggtcacccgggggctaaacaagaactcgcca
tctgtgccaccacaggggacacctgaagaagcaaagcaggtggagctatggaaaaaatac
attgcttgggagaaaagcaatcccctcagaacagatgaccatgccctcatcactaagcga
gtgatgtttgcgtacgagcagtgcctgctgtgcctgggccaccacccggacgtctggtac
gaggcagccctcttcctcgagcagtccagcaagctgctcaccgacaaaggagacctgaac
gctggcaagctcttctcagacgaggctgctgccatctacgagcgcgccaccaccactctg
ctgcggaagaacaccctcctctactttgcctacgccgacttcgaagagagtcgtatgaag
cacgacaaggttcatcaagtgtacaacaagttcattgaaattccagacatcgacccaaca
ctggcgtacgtccagtacatgaagtttgcgcgaagggccgagggcatcaagacggcacga
gtggtgttcaagaaggcgcgggaagacgctcgaagtggccaccaggtgtacgttgcagct
gcactcatggagtactactgcagcaaggagaagactgtggccttcaaaatatttgagctg
ggcctcaaaaagtacggggacaactcggactacatcatggcctacgtagactacctctca
catctgaatgaggacaacaacacaagggtgctgttcgaaagggtgctcacatcaggttca
ctgccaccagaaaagtcggtggagatttggaatcggttcctggaatttgagtccaacatc
ggcgacctctcgagcattctcaaggttgagaagcggagggctgctgctatcgaaaagctc
aaggagtttgagggcaaggagactgcgctgctagtggaccggtaccggttcatggacctc
tacccctgcagcccacaggaactgaagtcgctaggatacagggacgtgacgcggctgccc
gtggtggtgtcgtctgcgccagcgtcaaagcgtgaggtgcgcgaggagactgcaacagat
aagcagaaccccgtgttcccccgccctgacacgggacagatgatccccttcaagcccaag
cagatctgcccaactggggcgcaccttgttcctggcggcgtgttccctcctccgccagca
gcgtctgagctaatgatgaggctaccaccgccccattgtttcatgggtccctttgcagca
gttgatgagctgatggaggttttcaggaacatgaacctgcctgagaaacccccccgtccg
agcgagaacggtgtctcgaaagaccacttaaagctcttcgagcacagccaagcggccagc
ctacagtcgggcaaccccggcggcggaggcggcgtcaagcgcaagcaccgcgacggtgcc
gccgctggtgtaggcggcggcaccaacgcgggcggtgctggcgccgaagagagtgaggag
gaagacggtggcctcgcgccacccgcgcacgacatctatcggtcgcggcaacagaaaaag
agtcatacatcaagcatggatcgtcgcaataaagaatggtggccgactcaagaggctgtg
atgacaatttga
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