Dermacentor silvarum: 119465751
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Entry
119465751 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsv03041
]
119465751
03016 Transfer RNA biogenesis [BR:
dsv03016
]
119465751
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119465751
Spliceosome [BR:
dsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119465751
Transfer RNA biogenesis [BR:
dsv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
119465751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
119465751
NCBI-ProteinID:
XP_037582147
LinkDB
All DBs
Position
10:31602874..31653009
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AA seq
739 aa
AA seq
DB search
MTAFEEMGVLPEIARAVEDMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDDELGRGKKGGGAKPPTASTKWAMSFFDRGSALAVSPDGLTTQSRDQKGWH
GCRCTKGVQYRGKYYYEAKVTDEGLCRVGWSTQAAALDLGTDKQGFGFGGTGKKSFGKQF
DSYGEPFGMHDVIGCYLDLDNGSIKFSKNGNVFEDAFQIPQNLKRCPMFPSVVLKNAEME
FNFGATPFKHPPVDGYVAVSAAPKECIAESTVTGASVGAPKSVKNAPQAIIIEPSRELAE
QTLKCITSFKKHLKDPVIRELLVIGGVAAKEQIETLRNGVDIVVGTPGRLEDLISTGELS
LTQVRFFVLDEADGLLNQGNNDLINRIHRQIPQITAEGRRLQMVVCSATLHSFEVKNLPX
RLMHFPTWVDLKGEDSVPETVHHVVCIVDPRKDTSWMNVSRHVVTDGVHERDNVRPGAST
PETLSEAVKILKGEYTVRAIQQQNMDQGIIFCRTKLDCDNLENYLNHLSKGSRGRDNPFS
CVCLHGDRKPQERKANLETFKRGGAKFLICTDVAARGIDISGVPFVINVTLPDEKSNYVH
RIGRVGRAERMGLAISLVAAIPEKVWYHSNCSSKGRNCFNTNLTDRGGCCIWYNEPQYLA
DIEDHLNVTIQQVEPDLKIPADEFDGKVVYGQKRREMGSNYATHTAQMAPAVQELAQLEK
KSQSIFIQRYYLKDQSFLR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtttgaagagatgggcgtcttgcccgagattgcgcgggcggtcgaggacatg
gagtggacactcccgactgatgtgcaagcagaagcagtaccgctcattcttggaggtggc
gacgttcttatggccgctgaaacaggtagtggcaagactggtgccttttgtttgccgatc
ctgcaaatagtgtgggagacactgaaagacgacgagcttggccgaggcaagaagggaggc
ggagccaaaccacccactgcctccacaaaatgggccatgagtttcttcgaccgtggatcg
gcactcgccgtgagccctgatggtctgacgactcagagccgggaccagaaaggctggcat
ggatgccgttgcaccaagggagtccagtacagagggaagtactactacgaagccaaggtc
accgatgaaggcctttgccgtgtggggtggtctacgcaggccgcagctcttgatcttgga
actgacaagcaagggtttggctttggtggcaccgggaagaagtccttcggaaagcagttc
gactcatacggggagccctttggaatgcatgatgtgattggttgctacctcgacctggac
aacgggagcatcaagttttccaagaatggtaacgtctttgaggatgccttccagatacca
caaaacctgaagcggtgccccatgtttccatctgtcgtcctcaagaatgccgagatggag
ttcaactttggtgccacaccttttaagcatccaccagtggacggctacgtggcagtttcg
gctgcaccaaaagagtgcatcgccgagtccacagtcacaggagcgtctgtcggcgctccc
aagagtgtcaagaatgcaccccaagcaataatcatagagccctctcgagagcttgccgag
cagacgctgaagtgcatcacaagctttaagaagcacctgaaggatcctgtcatcagggag
ctgctggtcatcggaggtgttgctgcgaaggagcagatcgaaacgctgaggaacggggtt
gacattgtggttggaacgcctggtcgtctggaagacctgattagtacgggggagctaagc
cttacccaggtgcggttcttcgtccttgatgaagcggacggcctgctgaaccaagggaac
aatgaccttatcaaccgtatccaccggcagataccccagataacggccgaaggaaggcgt
ctgcagatggtggtgtgttcggcaaccctccattccttcgaggtcaaaaacttgccgtga
cgcctgatgcactttccaacctgggtagacctaaagggcgaggacagcgttccagaaaca
gtgcatcacgtggtgtgcattgtggacccgagaaaggacacctcttggatgaatgtgagc
cggcatgttgtgacggatggagtccatgagcgagacaatgtgcgacccggagccagcacc
cccgagaccctgtcggaggctgtgaagatcctgaagggggagtacacggtgcgtgccatc
cagcagcagaacatggaccagggcatcatcttctgccgcaccaagctggactgcgacaac
ctggagaactacctcaaccacctgagcaagggatcccgtggtagggacaacccattctcc
tgcgtctgcctccacggtgaccgaaaaccacaggaacggaaggccaacctggaaacattc
aagagaggtggtgccaagttccttatctgcactgatgtggctgctcgtggtatagacatt
tcaggcgtgccgtttgtgatcaatgtgaccctgccggacgagaagtcaaactatgttcat
cgcattggcagggttggacgagctgaaaggatgggtttagccatttctcttgttgcagct
attcctgagaaggtgtggtaccactccaactgttcaagcaagggtcgcaactgcttcaac
acgaatctgacagaccgcggtggctgctgcatctggtacaatgagccacagtacctggca
gacattgaggaccaccttaacgtcacaatccagcaagtagagcctgacctcaagatcccc
gccgatgagtttgatggcaaggtggtctatgggcagaagcgccgggagatggggagcaac
tatgctacgcacacggcacagatggcgccagctgtacaggagctggctcagttggaaaag
aagtcgcagtccatcttcatccagcgttactatctcaaggatcagtcgtttctgagatag
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