Dermacentor silvarum: 119465917
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Entry
119465917 CDS
T07348
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X4
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
dsv
Dermacentor silvarum
Pathway
dsv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119465917
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsv01009
]
119465917
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsv04131
]
119465917
03029 Mitochondrial biogenesis [BR:
dsv03029
]
119465917
Protein phosphatases and associated proteins [BR:
dsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119465917
Membrane trafficking [BR:
dsv04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119465917
Mitochondrial biogenesis [BR:
dsv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119465917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
TBK1_ULD
Octopine_DH
Gly_acyl_tr_N
Motif
Other DBs
NCBI-GeneID:
119465917
NCBI-ProteinID:
XP_037582321
LinkDB
All DBs
Position
10:65700518..65797281
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AA seq
1222 aa
AA seq
DB search
MLYVFLVDTGKMVTFDMNHAVESVEHLKAVISQRFNVPIEKQVLLISGGESLQPAASVGS
YSAGTDTNPIFFFNKVSIESDSLVRSSELVSSDQDMSLELEAVVDMPPSFNTVVTRTQLA
QEFCDRARVEVRTSELLVHEQHLQQQGWAAVVANLDDMTTSLRNNAGGIEQELTEFLQSH
QQHTELLESLDEDIVLLGKIPVLPALLSSEHQDEQKGMMLLDWINSTDSKSSLKDMANQC
KACLKQLVAEGLEKCRAEVQRVMEMVADQRMLEIRGVEEWLINLDELMARARKLEQDQQE
HLQSFVQNQSSFSRLKDPSVLPDLSESHVKQLKIMLQNHEGLRDIRRRCVSAKDHLSQNL
KERLRWIIYVEKIISEAQLRLMFTTLATRQLRRQLEICRQIHMAPHTYLRAVTEVIRRRH
FSHHFLQWAGTLSSQCQQLHQHEVQARRDFNSQFSKHFLHALFPGMDDLPPPFATRNPKP
FDDNLPPLAPEDLEFLRKALPELSELLRTPDTVTLPTVVLPPSGAAQSCRDAASQPDAEA
SSSCIPPDASCQQLQPEEPDCETDEALRSASEKDCHDGACSEDRERTPKLAVSDDEFEEV
TDEPSTGLNAATADILCMPAPQDAILCSPDSLGHTSQDFQTADFYIDESMPSSISDSNGV
VPAAPSVVPPSSAVAAPVQQAQVAAELQRQLEEKSAALLTAQKELERERAERQELRHGLT
SLCEAAAAVCSDSRSDAVSLREDLAAARQMLSQEASLIGAAMDTALQALLARLENEKAAS
IAAEVDRVRREFESAEEDHRHRLEVERLKLEDAHREVHLYQQQLQQLTQLTDSLRNDSTL
ALATLKNSLQQEQESALAKATLEHELEQEALQERLRAFERSHEEEVQDLNECICEKDRQI
QMLFQERQGLEEQLHSHFAMEKEELLAQCRQECAQREQAIREELVALHEQQLNRIQHCHE
EAIQKAKEQTRLELQQEWESRMPDFKLLQRRESIEDLDTAAGDSCSLEEAKPDPCGESMM
ESTVKLPHSADPMLLELRSQLLEKQNEVNRLQQQVMAMSDNFGTQLQPSPIDKVSILTCQ
PGDIVLLCFDEGHQNYVLFVLGPNLHFLHTDCLDTLGLKTAPGTVRKGWVLAEVVEKEFC
QARKPQNRYRVPAGTRFYRVKAKPWDKEAAVRREQQRRSSLRSLTQSSFITASSATEEVA
PPPPAQSEGASAGEPYPQPLDS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacgtgttcctcgtcgatacaggcaagatggtgacctttgatatgaaccacgcc
gtcgaaagtgtggaacatctcaaagcagtgatttctcaacggttcaatgtgccgatcgaa
aaacaagtgctgctcatcagcggaggcgaaagcctgcagccggcagcttctgtgggcagc
tatagtgcaggcaccgacaccaacccaatcttcttcttcaacaaggtttccattgaatcg
gactctcttgtcaggtccagtgaactggtctcgtcagaccaggatatgtcgctggagctg
gaagcagtggttgacatgccgccttctttcaacaccgtggttacaaggacacagcttgct
caggaattctgtgatcgtgctcgggtggaagtgagaacctccgaacttcttgtccatgaa
cagcacctgcagcagcagggctgggctgctgtggttgccaaccttgatgacatgacgacg
agtctgaggaacaacgcaggaggcattgaacaggagctgacagagttccttcaaagtcac
cagcagcacacggagctgcttgagagtttggacgaagatatcgtactcctgggaaagatt
cctgttcttccggcattgctgtcttccgagcaccaggatgaacagaagggcatgatgttg
ctagactggatcaactccacggacagcaaaagcagtttgaaagatatggccaaccagtgc
aaggcatgcctgaagcagcttgttgcggaaggccttgagaagtgccgtgcggaggtgcag
agggtgatggagatggtggccgaccagcgcatgctggagattcgcggggtcgaggagtgg
ctgatcaacctcgacgaactcatggccagggcacgcaagctcgagcaggaccaacaggag
cacctgcagtcctttgtgcaaaaccagtcaagcttctcccgcctcaaggatcccagcgtc
ctacctgacctgagtgagagccacgtgaagcagctcaaaattatgttgcagaaccacgag
ggtctgcgtgacattcgacgccgttgcgtctcggcaaaagaccacctctcgcaaaacctc
aaggaacgcctgcggtggataatttacgtcgagaagataatctccgaggcacagctgcgc
ttgatgttcaccacactggccaccaggcagctgcgcaggcagctcgagatttgccgccag
atccacatggcaccgcacacctacctccgcgccgtcaccgaggtcatccggcggcgtcac
ttctcccaccacttcttgcagtgggcgggcacgttgtcatcgcagtgccagcagctgcac
cagcatgaagtgcaggcccggagggacttcaacagccagttctccaagcacttcctgcac
gccctctttcccggcatggatgacctgcctccaccatttgcaacacggaatcccaagccg
tttgatgacaatctgcctcctctggctcctgaagacttggagttccttcggaaagcactt
ccagaactgtcagaactgcttcgcactcctgacacggtcacgttgccgaccgttgtgctg
ccgccgtcgggtgccgcacagtcctgccgagatgctgcatcgcagcccgatgcggaggct
tcatcatcttgcattccaccggacgcttcttgtcagcagctgcagccagaggagcccgac
tgtgaaaccgacgaggcgttgcggagtgcctccgagaaggactgccatgatggtgcctgt
tctgaagatcgcgagcgcaccccgaagctggcagtgtccgatgacgagtttgaagaggtc
actgatgagccgtctacaggcctcaatgctgccactgccgacatcctgtgcatgccagca
cctcaggacgcgatcctctgctccccagactctctgggccacacctcgcaagatttccag
acggcagacttctacattgatgagtcgatgccttcgtcgatatcggacagtaatggagtc
gtgcctgctgcaccaagtgtcgttccaccgtcgtctgcagtggcagcacccgtccagcaa
gctcaagtggctgccgaacttcagcggcagctagaagagaagagtgcagcgctgttgaca
gctcagaaggagcttgagagggagcgtgccgagaggcaagagctgaggcatggcctgacg
agcctgtgcgaagcagctgcggcagtgtgctcggactctcgatcggacgctgtgtcgctg
cgtgaagacctggctgccgcccgccagatgctgagccaggaggcgtcgctcattggggct
gccatggacactgcccttcaggccctgctagccaggcttgagaacgaaaaggccgcgtcc
atagcagccgaggtggacagggtgcgacgcgagtttgagtcggccgaggaagaccaccgg
caccgtctggaggtggagcgcctaaaactggaagatgcccaccgggaggtgcacctgtac
cagcagcagctccagcagctgacccaactcacagacagcctgcggaacgactcaaccctt
gccctcgccacgttgaagaacagcttgcaacaagagcaagagtctgcacttgccaaagcc
acactcgagcacgagctggaacaggaggccctgcaggagcggctgcgtgccttcgaaagg
agccacgaggaggaagtgcaggacctcaatgagtgcatctgcgagaaggaccggcagatc
cagatgctgttccaggagaggcagggcctggaggagcagctgcacagccacttcgcaatg
gagaaagaggagctgcttgcacagtgccgccaggagtgcgcccagagggagcaggccatc
agggaggaactggtcgccctccacgagcagcagctcaaccggattcaacactgccacgaa
gaagcgatccaaaaagccaaagaacagacgaggctagagcttcagcaggagtgggaaagt
aggatgccagatttcaagctgttgcagaggagggagtccattgaagacttggacaccgcc
gcgggcgactcctgctctctcgaggaggcgaaacccgacccatgcggagagagcatgatg
gagtccactgtgaagcttccccactcggctgaccccatgctgctggagttaaggagtcaa
ttgcttgagaagcaaaatgaagtcaatagactgcagcaacaagttatggccatgtccgac
aactttggcacccagcttcaaccgtcccccattgacaaggtctccatcctcacatgccag
ccgggtgacattgtgcttctctgcttcgacgaaggtcaccagaattatgtcctctttgtg
ttgggcccgaacttgcactttctgcacacggactgcctcgacaccctcggcctcaagaca
gcacctggcacagttcgcaaaggttgggtcctggctgaggttgtcgagaaagaattctgt
caagcacgcaagccacagaaccgatatcgagtgcctgctggaacccgcttctaccgggtc
aaggcaaagccgtgggacaaggaggctgctgtgcgtcgcgagcagcagcggcggtcatcg
ctccgcagtctcactcagtcgtcattcatcactgccagctccgccaccgaggaagtggca
ccgccgccgcctgcccaatccgagggcgcctccgccggagagccctatccgcagcccctc
gattcctaa
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