Dermacentor silvarum: 119466080
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Entry
119466080 CDS
T07348
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
dsv
Dermacentor silvarum
Pathway
dsv03013
Nucleocytoplasmic transport
dsv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119466080
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119466080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119466080
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119466080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
119466080
NCBI-ProteinID:
XP_049513563
LinkDB
All DBs
Position
10:7963347..8032324
Genome browser
AA seq
1443 aa
AA seq
DB search
MAGRPTRPTDDKTQQVKPYERRRSVLQTVTSVMRQLLTPSWLSEHPPEPVSEEKPDLING
ERDPSVYPSLASPRSTRDCAVGPDDVFNETSSFSEPVTSRPETPLQRPLERPQEQLLERS
LERTFERPLERLYARPSERLSERLSERLSERPLGHTFKRTLERSPEQTSEWPLQQSQQWS
AATPSPSSRTSLIGTASSNKRQKLWQEESPLKSPFYSGQTTYGGAAAQNRLRMLATSQTP
MVPVMARGVKPGGATAGLSNTTRQILATLEKMATPVTEAKRVPLRSRIAGGRPWTLPHHR
DPPAPTQGGPPIRSAARPAVRTVVPLRAEMSRLEVSRKESIAAESSWADAVRTKVPRMET
GRPEVPRVDASKQDPPRTEAPNVEASIVTLASVAKQKPVASAWEPPSSRSAPDRAPGGGK
MVRVIHTAHPAPLKMSGPPLQSEEELPPAVPLPPIPSLPTFSFKLAPPPPPPPPKAPLAS
PQAAPASNSSSKASNGNTGSTSSGPVSTGPVGTVTEFTFSKPEALASSSAGLLERPQRDQ
VYQFSEPWGPSGDEKQQEDKLSNDTGHRLKKPREAIKADPQAKSVLDVVRPESERSEGNK
EPEKSKAKVDKDSSSSTKDVGDLWERFKPAEGNWSCSTCMISNPASASCCQACETPSPNV
APKAAVVAPTSLPSSTPPPPQPLSASGAPTASRWECTTCLVRNETSATRCCACESPRPSS
TSSATPGATPSAVASGSLWECDTCLVRNQPMAMRCCACENPRPSASSVTPSSAEAAAAAF
NFKLPSSGPSGFGGAPFAAAATQFKFGIPASTSVKLSEAASSESAVKPFKFGITSTATLT
TTTTEITSTTAAPLKNFKFGSSSEEPSKAINFGSPASEASKTFKFGTSTEEPATTSFKFP
TTTEEPAKKSFNFGITTPGPMKAFTLGTSSEEPAKGLKPSTTTEEAAKLFNFGSSSEQST
KPLKFGCTTDEPAKLPQAGPGAEVSTKAFKFGSTTDEPAKPSQLSSSTEAAPSSFKLGQL
GHMAEPSKGFTFGSTVKEPAKPFTFGSTSSSETPTGSFKFGSTTEEPANTVKLGSSEEQQ
PATKAFKFIAPAAPAEPSKLFQFGATAEQPPKLGTPVNNPTKPFSFGAPATTAGATEAVP
KPFSFGLTGKPNDMSAPTVTAQQPSILPQAGSQTTTAGQLPGFLATATTASAAPAIVTPS
LPAAATAVEPAKPAFPTSQFVFGQKTDGSSAAFSFGSQPAPAFPQPPSGASAPLPSFGNL
TSKPPEPQAAAQQPTFGIGATSTPAFGALNPLKPAATSAVVPAATSMPVGFGCQQPTPNS
GFGLPAANVPTQSSFVFRPPTTAPPVTFQFGSTGPTSGGVFRFGAQPNQPATPLQQQPQQ
QQPAHEPFGTPFGQTAPMQFGMSPSPLFPAPDSENPFNATSGSGGPAQQRRIRKAIRRKP
TPR
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaagacccacccggcctacggatgacaagacacaacaggtgaaaccttacgaa
agacgcaggtcagtgctgcaaactgtgacttcagtaatgcggcagctgctgacaccatcc
tggctgagtgagcacccgcccgagcctgtcagtgaagaaaagccagatctaataaatggc
gaaagggatccttctgtctatccgtccctggcctcaccacggtcgacacgggactgtgct
gtgggaccggacgatgtctttaatgagacatccagcttctcggagcctgtgacatcaagg
ccggagacaccattacagcgacctttggaacggccacaagaacagctgttggagaggtcg
ttagaaaggacatttgagcggccattggaaaggttgtatgcacgaccatcagagcgattg
tcggagcggttatcggagaggctatcggaaaggccactgggacacacattcaagaggacg
ttggagcggtcgccagagcagacatcagagtggccattgcaacagtcgcagcagtggtca
gcagcaacacccagtcccagcagtcgaacaagtctcattggaacagctagctccaacaag
agacaaaaactttggcaggaagagagccctttgaagtctcctttctactctggtcagacg
acatatggtggagctgctgcccagaacaggctacgaatgctggccacgtctcagactccc
atggtccctgtcatggctcgaggtgtaaagccgggtggagcaacagccgggctaagtaac
accacccgtcaaatcctggccacccttgaaaagatggcaactcctgtgacggaggcgaag
cgggtaccactgaggagcaggatagcaggtggccggccgtggactctcccacatcacaga
gatccccctgcaccaacacagggagggcctccgatcagaagtgctgcgaggccagcagta
cgaaccgtagtgccgctgcgagcagagatgtctcgattagaggtctctagaaaggaaagc
atcgcagccgaatcctcatgggccgacgctgttaggacaaaggtgcctcggatggaaact
ggcaggcccgaagtgcctcgggttgacgcttccaagcaggacccaccaagaacagaggcc
cccaatgttgaagcgagcattgtgacgctggcatctgtagccaaacagaagccggtggct
tctgcttgggaacctccgtctagtaggtcagctcctgatcgtgcaccaggaggaggcaag
atggttcgtgttatccacacagcccatccggcaccactgaagatgagtggcccaccactt
cagtcagaggaagagcttccacctgcagtgcctcttccacccatcccgagccttcctacc
ttctctttcaaactcgcaccaccaccaccaccaccaccaccaaaagcgccactagcttcc
cctcaagctgctcctgccagcaacagcagcagcaaggcaagcaatggtaacactggcagt
accagctctggccctgtcagcactggccctgttggcacagtcactgaattcaccttcagc
aagccagaggcattggccagctccagtgctggattgctggaacgacctcaaagagaccag
gtgtatcagttctctgagccttggggaccaagtggcgatgagaaacagcaggaagataaa
ctgtctaatgacacaggtcatcgactgaagaagcccagagaggccatcaaggcagatcct
caagcaaagtctgtactggatgtcgtcagaccagagagcgagaggtctgagggcaataaa
gagccagagaaatccaaggcgaaagtcgacaaggacagcagcagttccacaaaagatgtt
ggggacctctgggagcgcttcaagcccgctgaaggaaactggtcatgctcgacgtgcatg
atcagcaacccagcctcggcaagttgctgccaagcttgtgaaacgccatctcctaatgtt
gctcccaaagcagcagtagtggctcccacgagccttccttcctcaacgccacctcctcct
cagccactgtctgccagtggtgctcccacagcttctcgctgggagtgcaccacatgcctg
gtgaggaacgagaccagcgccactcgctgctgtgcctgcgagagtcctcggccatcctcg
accagcagtgctacacctggtgctacgccttctgcggtagccagtggttccctttgggag
tgtgacacatgcctcgtcaggaaccagcccatggccatgcgctgttgtgcctgtgagaat
ccccggccgtcggccagcagtgtcactccttcttcggcagaggcagctgcagcagcattc
aacttcaaattgccctcctctgggcctagtggctttggcggggcaccctttgctgcggca
gccacgcaattcaagttcggcatacctgcttcaacctcggtgaagctatctgaagctgct
tcctcagagagtgcagtaaaacccttcaaatttggcattactagcactgccacacttaca
accaccactaccgaaataacttctactactgcggcacccttgaagaatttcaagtttggt
tcttcctcagaggaaccatcaaaggccatcaactttggttcaccagctagcgaagcgtct
aagacattcaagtttggcaccagcaccgaggagccagcaacgacgtcattcaagtttcct
accactactgaggagccagcaaagaagtcattcaactttggcataacaacacctgggcct
atgaaggcatttacacttggtactagttcagaggaaccagctaagggactcaagccaagc
acaactacagaggaggcagcaaagctgttcaatttcggttcgtcttcagagcagtccacg
aaacctctgaagtttgggtgcacaacagacgagccagccaagttgcctcaggctggacct
ggtgcagaagtttctacaaaggcctttaagtttggttccaccacagatgaacctgcaaag
ccatcccagcttagcagctccacagaagctgcaccgagcagcttcaagcttggtcagctt
ggtcacatggcagagccaagcaaaggatttacttttgggtctactgtcaaggaaccggca
aagccattcacgttcggctccacttcttcatcggagacacccactggaagcttcaagttc
ggctctactacggaggagcctgcaaacactgtcaagcttggttcctctgaggaacagcag
ccagctacaaaggccttcaaattcattgcaccggcagctcctgcagaaccatctaagctg
tttcaatttggtgcgactgcggagcaaccaccaaaattgggcactcctgtcaacaatcct
actaagcctttcagttttggagcacctgcaactacagcaggagcaacagaggcagtgcca
aagccattttcatttggcttgacaggaaagcctaatgatatgtcagcccccacggtgacg
gcgcagcaaccatctattctgcctcaggcaggcagccagaccaccactgctggacagctg
cctggctttctagccacagccactacagcatctgctgcaccagcaatagtcacaccttcc
ctgccagcagcagcaactgctgtcgagcctgccaaaccagccttcccgacttcgcagttc
gtttttggccagaaaactgatggcagtagtgctgcgttttcatttggctcccagcctgcg
ccggcttttccccaacctcctagtggtgcatctgctcccttgccatcttttggcaacctg
acaagcaagcccccagagcctcaggcagcagcacagcagccaacatttggcattggggca
acatccactcctgcgtttggtgccctcaaccctctcaagcctgctgctacctctgccgta
gtgcctgctgccaccagcatgccagttggctttggctgccaacagccgacacccaattct
ggatttgggctgcctgcagcaaatgtccctacccagtcatcattcgtctttcggccccca
acaaccgcaccgccggtgactttccagtttggcagcactggccccacctcgggtggagtc
ttccgttttggagctcagccaaaccaaccggccacgcctctgcagcaacagccgcagcag
cagcagccagcccacgaaccttttgggaccccatttggccaaacagcccccatgcagttt
ggcatgtcaccctcgccactttttcctgcgccggattccgagaacccgttcaatgccacc
agcggcagtggagggcctgcgcagcagcgtcgcatccgcaaggccattcgacgaaagccc
acaccgcggtag
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integrated database retrieval system
