Deinococcus radiopugnans: QR90_14100
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Entry
QR90_14100 CDS
T03508
Name
(GenBank) RNA helicase
Organism
dsw
Deinococcus radiopugnans
Pathway
dsw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR90_14100
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIZ46699
UniProt:
A0A0A7KMS9
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Position
complement(3020907..3022310)
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AA seq
467 aa
AA seq
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MQAGAIPALLSGRDVITTARTGSGKTLAFLIPAAARGIGMKEVRGIRPEVLVVTPTRELA
VQIRDVARELGMTAGRITGGITPGQTRSEATGKGLISGTPGRLKDLISRRELNLAGLRYV
VLDEADELLSLGFLKDVGDILRSAQTQSQAQNGQKLQIAMASATFPGEIRTVAQQFMVNP
ERIDIAPAARAEQGNPDDILGGATGATHLLVHTTRDDVMDVAAEQIREALRAPGGCVVVF
SRTKSLVKRRAERLEGMLPGEIVSPLQGNMDQKKRERTMALLREGKSRILVATDIAGRGI
DLPEVRLVIHMDVAQTAEDHVHRSGRTARAGRPGVNLVLLIPEQRGLWQTVRRGLPPALH
PPLTPQEGQVDRAIQEKQGRGSGNGLMPGESGGGRGRGQGGGQGRGGQGGGQSRGQAQGR
GQTGHSDRGGRGAQASGQRRSESGGAGTGAGRVGPQPARGRGGRGRG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggccggggccatccccgcactcctgagtgggcgcgacgtgatcaccaccgcccgc
accggcagcggcaagacattggcctttctgattccggccgccgcgcgcggcatcggcatg
aaggaggtgcgcggcatccgccccgaggtgctggtggtcacgcccacccgcgagctggcc
gtgcagatccgcgacgtggcccgcgaactgggcatgaccgctgggcgcatcaccgggggc
atcacgccggggcagacccgcagcgaggcgacgggcaagggcctgatctccggcacgccg
ggccgcctcaaggacctgatcagccgccgcgaactgaacctcgctggcctgcggtacgtg
gtgctggacgaggccgacgagctgctgtcgctgggcttcttaaaggacgtgggcgacatc
ctgcgttcggcgcagacccagagtcaggcccagaacgggcaaaaactgcagatcgcgatg
gcctcggccacctttcccggcgaaatccgcacggtggcccagcagttcatggtcaacccc
gagcgcatcgacatcgcgcccgccgcccgcgccgagcagggcaaccccgacgacatcctg
ggcggggcgaccggggccacgcacctgctggtgcacaccacccgcgacgacgtgatggac
gtggccgccgagcagattcgtgaggcgctgcgggcgccgggcggctgtgtggtggtcttt
tcgcgcaccaagtcgctggtcaagcgccgcgccgaacgactggagggcatgctgccgggc
gagatcgtcagcccgctgcagggcaacatggaccagaagaagcgcgagcgcaccatggcc
ctgctgcgcgagggcaagtcccgcatactggtcgccaccgacatcgccggacgcggcatc
gacctgcccgaggtgcgcctcgtgattcacatggacgtggcgcagaccgccgaggaccac
gtccaccgttcgggccgcaccgcccgcgccggccgtcctggcgtgaacctggtgctgctg
attcccgaacagcgtgggctgtggcagaccgtgcgccgggggctgccgcccgcgctgcac
ccgccgctgaccccccaggaaggacaggtcgaccgcgccattcaggagaaacagggccgc
ggctccggcaacggcctgatgcccggcgagagcggcggcggacgtggccggggccagggc
ggcggtcagggtcggggcggacagggaggcggccagtcccgtggtcaggcccagggacgt
ggacagacggggcattccgaccggggcgggcgcggcgcgcaggcctcggggcagcgccgc
tcggaatccggcggtgctggcacaggtgcggggcgtgtggggccgcagcctgcgcggggg
cggggtggacgcgggcgcggataa
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