Desulfolutivibrio sulfoxidireducens: GD604_00380
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Entry
GD604_00380 CDS
T06821
Name
(GenBank) HD domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dsx
Desulfolutivibrio sulfoxidireducens
Pathway
dsx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GD604_00380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsx03019
]
GD604_00380
Enzymes [BR:
dsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GD604_00380
Messenger RNA biogenesis [BR:
dsx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GD604_00380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_NucTran2_2
DUF5662
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QLA18296
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All DBs
Position
complement(82307..83626)
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AA seq
439 aa
AA seq
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MSQSFKEAASICKTIMRNGYDAYVVNARLQEKAKGSEAMEIDICTDMTLADLQKIYPSTE
KTGTDTAFAIYKAESCIIFFYPADSEDGSHPEECVAMVTPRLLKKLQDTGEMPLHLACPY
LPRPKDVHDGFADLGSGEIRLLGLPDQTLRQNYLRAVRALRFSANYNLPIEHNTWMAILR
SARRVLDYVSASDIIDEWRKVEAETMAAFVKLLYESMILHGLIPEIAAMARIKQQKNETE
EETVFDHTLDVMANYPHELPYDWYGTLACLFHDVGKLHTAEFFDGRWTFYQHHRVGAKVT
RKILSRLHFPPEETDLVCFLVRHHMRFHFMLTDRGIRRFKALDEYPRLIEMVRADIKARG
GSYKEFNHNMKMLDRSDTPEDMLEPLLNGGRIMQLTGLKPGPAVGLLRDALLKAQISGDV
TNVDEAVAFVARHRAADSL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtccttcaaggaagccgcttccatctgcaaaaccatcatgcgtaacggctac
gacgcctatgtcgtcaatgccagacttcaggaaaaggccaaaggctccgaggcgatggaa
atcgacatctgcacggacatgaccctggccgacctgcaaaagatctacccctcgaccgag
aagaccggaacagacaccgccttcgccatatacaaggccgaatcctgcatcattttcttc
tatccggcggattccgaggacggctcgcaccccgaggaatgcgtggccatggtcaccccg
agactcctcaaaaaactccaggacacgggagagatgcccctgcacctggcctgtccctac
ctgccgcgtcccaaggatgtccacgacggcttcgccgacctgggatccggagagatccgc
ctgctcggcctcccggaccagaccctgcggcaaaactatttgcgggccgtgcgcgccctg
cgcttctccgccaactacaatcttcccatcgaacacaatacctggatggccatcctgcgg
tccgcccgtcgcgtcctggactacgtctcggccagcgacatcatcgacgaatggcgcaag
gtcgaggccgagaccatggccgccttcgtcaaactgctctacgaatccatgatcctgcac
gggcttatccccgaaatcgcggccatggcccgcatcaaacagcaaaaaaacgaaaccgaa
gaggaaaccgtcttcgaccataccctggatgtcatggccaactacccccatgaacttccc
tacgactggtacggcaccctggcctgcctgttccacgacgtgggcaaactgcacaccgcc
gaattcttcgacggccgctggaccttctaccagcaccaccgcgtcggggccaaggtcacc
cgcaagatcctgtctcgattgcacttccccccagaggaaaccgacctggtgtgctttctg
gtgcgccaccacatgcgcttccacttcatgctcaccgaccggggcatccgccgcttcaag
gccctggacgaatacccgcgcctgatcgaaatggtccgcgccgacatcaaggcccggggc
ggcagctacaaggaattcaaccacaacatgaagatgctcgaccgctccgacaccccggag
gacatgctcgaaccgctcttaaacggcgggcgcatcatgcaactgaccggcctcaaaccc
ggacccgccgtggggcttttgcgcgacgccctgcttaaggcccaaatctccggcgacgtc
acaaacgtcgacgaggccgtggccttcgtcgcccgccaccgcgccgcggatagcttgtaa
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