Desulfolutivibrio sulfoxidireducens: GD604_00520
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Entry
GD604_00520 CDS
T06821
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dsx
Desulfolutivibrio sulfoxidireducens
Brite
KEGG Orthology (KO) [BR:
dsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsx03032
]
GD604_00520 (topA)
03400 DNA repair and recombination proteins [BR:
dsx03400
]
GD604_00520 (topA)
Enzymes [BR:
dsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GD604_00520 (topA)
DNA replication proteins [BR:
dsx03032
]
Prokaryotic type
DNA Topoisomerases
GD604_00520 (topA)
DNA repair and recombination proteins [BR:
dsx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GD604_00520 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1451
Toprim_4
Lar_restr_allev
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
QLA18319
LinkDB
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Position
109312..111576
Genome browser
AA seq
754 aa
AA seq
DB search
MAKELIIVESPAKVKTIKKFLGNAYAVEASVGHVRDLPTSSLGVDEKKNFAPQYQIIQGK
QKVVTRLREAAAKAKRIYLAPDPDREGEAIAWHVAELLKDGDRPIHRIFFNEITAKAVRE
ALKNPREIDEKLFLSQQARRILDRLVGYKVSPLLWKKVKRGISAGRVQSVALKLVVEREK
ERQAFVPEEYWVFKALLAAAEPPVFEAELWKVAGKKPVIGDAETASALRAEILESPFAVA
AMVEKERAKSPPPPYITSTLQQAANQRLGFSAKRTMGAAQRLYEGVELGERGTVALITYM
RTDSVRIADEARQAAREFIVDTLGPEFYPDKPRFFKTKASAQDAHEAIRPVDPAVTPDDV
RASLPREQYALYKLIWERFLASQMAEARFWDTTAEIKAGRALFRAKGQRLIFPGYLKVYG
MEAGDEAKTLPPLAKGQSLTLAELKTDQKFTQPPPRYTEASLVRELEEKGIGRPSTYAAI
ISTLIDREYARLEEKHFVPSELGTTVSDLLSDHFATIMDVGFTAGMEAALDEVAEGQRDW
VALLTDFTGGFYPALEKAAEDMAAVKAGKETGLVCEKCGKPMVIKFGRMGEFLACSGYPD
CKNTSNFVRTPDGGIELVARQVDEPVVVGKCPECGKDLVLKKSRTGSRFVACTGYPACKH
AEPFRTGVACPREGCGGELVEKSSKRGKIFYSCDQYPQCDYAVWDWPVAEPCPKCGSKIL
VKKRTQAKGEHLACPEKSCRYTRSLDGNDPEDTE
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagctgatcatcgtcgaatccccggccaaggtgaaaaccatcaagaaattc
ctcggcaacgcctatgccgtggaggcctcggtcggtcacgtccgcgacctgcccacgagc
agcctgggcgtggacgagaaaaaaaatttcgccccccagtaccagatcatccagggcaag
caaaaagtcgtcaccaggctgcgcgaggcggcggccaaggcgaagcgcatctatttggcc
ccggacccggaccgcgagggcgaggccatcgcctggcacgtggccgaactgctcaaggat
ggggaccggcccatccaccgcatctttttcaacgagatcacggccaaggccgtgcgcgag
gccctgaaaaatccccgcgagatcgacgagaagctctttttgtcccagcaggccaggcgc
atcctggaccggctggtgggctacaaggtctcgccccttttgtggaaaaaggtcaaacgc
ggcatctccgccggccgggtgcagtccgtggccttgaagctcgtggtcgagcgggaaaag
gagcgccaggccttcgttcccgaggaatactgggtattcaaggcccttttggccgccgcc
gagcccccggtcttcgaggccgaactgtggaaggtcgccgggaaaaagccggtcatcggc
gacgccgagaccgcctcggccctgcgcgccgagatcctcgaaagccccttcgccgtggcc
gccatggtcgaaaaggagcgggccaagtccccgccgccgccctatatcacctccaccctg
cagcaggccgccaaccagcgcctgggcttttcggccaagcgcaccatgggcgcggcccag
cgcctctacgagggcgtggaactgggcgaacgcggcaccgtggcccttatcacctacatg
cgcaccgactccgtgcgcattgccgacgaggccaggcaggccgcccgggaattcatcgtg
gacacgctggggccggaattctacccggacaagccccgctttttcaagaccaaggcctcg
gcccaggacgcccacgaggccatccgtcccgtggatccggccgtcacccccgacgacgtg
cgggccagcctgccccgggagcagtacgccctgtacaagctcatctgggagcgttttctg
gcctcgcagatggccgaggcccgcttctgggacaccacggccgagatcaaggccggccgg
gccctgttccgggccaagggccagcggctgatctttcctggctatctcaaggtgtacggc
atggaggccggggacgaggccaagaccctgccgccgttggcaaagggccagtccctgacg
cttgcggaactcaagaccgaccagaagttcacccagccgccgccgcgctacaccgaagcc
tcgcttgtgcgcgagttggaggaaaagggcatcggccggccctccacctacgcggccatc
atttccaccctgatcgatcgcgaatacgcccgcctggaggaaaagcacttcgtgccctcg
gaactcggaaccaccgtgtccgaccttttgtccgaccacttcgcgaccatcatggacgtg
ggcttcacggccgggatggaggccgccctggacgaggtggccgagggccagcgggactgg
gtggccttgctcacggatttcaccggcgggttctatccggccctggaaaaggccgccgag
gacatggccgcggtcaaggccggcaaggaaacgggccttgtctgcgagaagtgcggcaag
cccatggtcatcaagttcggccgcatgggcgagttcctggcctgctcgggctaccccgac
tgcaagaacacctcgaatttcgtccgcaccccggacggcggcatcgagttggtggcccgt
caggtcgacgagcccgtggtggtggggaagtgccccgagtgcggcaaggacctggtgctc
aaaaagtcccgcaccggcagccgcttcgtggcctgcaccggctatccggcctgcaagcac
gccgaacccttccgcaccggggtcgcatgcccccgggagggctgcggcggggaactggtg
gagaaaagctccaagcggggcaagatcttctattcctgcgaccaatatccccagtgcgac
tacgccgtgtgggactggcccgtggccgagccctgccccaaatgcggctcgaagatcctg
gtcaaaaagcgcacccaggccaagggcgaacacctggcctgcccggaaaaatcctgccgc
tacacgcggtccctggacgggaacgaccccgaagacacggaataa
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