KEGG   Desulfolutivibrio sulfoxidireducens: GD604_02955
Entry
GD604_02955       CDS       T06821                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dsx  Desulfolutivibrio sulfoxidireducens
Pathway
dsx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GD604_02955 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsx03019]
    GD604_02955 (rny)
Messenger RNA biogenesis [BR:dsx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GD604_02955 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 Spore_YhcN_YlaJ
Other DBs
NCBI-ProteinID: QLA18758
LinkDB
Position
703824..705383
AA seq 519 aa
MDFSTVFIVIVSLCAGGAGGYYLYQFISQKTLKESRSLAERILEEAKKEAQAQKKEFLVQ
AQDDLFRQKKELENEYKERLQSLESKESQLARKQEKLEEKQEQVVARESEQLGTEKRLAS
LERALSEKQEQLERSSEEHLQRLQEISGLTVDEARKLVLAETESRTRHEAARMIRQIEME
ARETADKSGKKILALAIQRYAGDFVAEQTVTAVTLPSEEMKGRIIGREGRNIRALEAATG
VDLIIDDTPETVILSAFSPIRRQVAKMALERLITDGRIHPARIEDIVKKVEQEFEVKLRE
IGEQATFDIGVHGINPELVRLLGHLQYRTSYSQNVLQHSLEVSTLCGIMAAELGLDVKKA
KRAGLLHDIGKAVDHEIEGPHAVIGADLAKKFGEGPDIIHAIQAHHEDVPPKSILAILVQ
AADSLSGARPGARKELLESYVKRLEELENLATAFDGVSKAYAIQAGREIRVVVDSDAVDD
DKTFLLCKDIAKQIEDNLTYPGQIRVTVIRERRAVGYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggatttttccaccgtttttatcgtgatcgtgtcgctgtgtgccggaggcgccgggggc
tactacctgtatcagttcatctcccagaaaacgctcaaggaatcccgctccctggccgag
cgcatcctcgaggaggccaagaaggaggcccaggcccagaaaaaagagtttctggtccag
gcccaggacgatctgttccgccagaaaaaggaactcgaaaacgagtacaaggagcggctc
cagtccctggagtccaaggaatcccagcttgcccgcaagcaggaaaaactcgaggaaaag
caggaacaggtcgtggccagggagagcgagcagctcggcacggaaaagcgcctggccagc
ctggaacgcgccctttccgaaaaacaggaacagctcgaacggtcctccgaggaacacctc
cagcgccttcaggagatctccggcctgaccgtggacgaggcccggaagctggttctggcc
gagaccgaaagccgcacccggcacgaggcggccaggatgatccgccagatcgagatggag
gcccgggagaccgcggacaaaagcggcaagaagatcctggccctggccatccagcgctat
gccggggacttcgtggccgaacagaccgtcaccgccgtgaccctgccctcggaggagatg
aagggccgcatcatcggccgcgagggccgcaacatccgcgccctggaggcggccacgggc
gtggacctgatcatcgacgacacccccgagacggtcatcctctcggccttctcccccatc
cgccgccaggtggccaagatggccctggagcggctgatcaccgacggccgtatccatccg
gcccgcatcgaggacatcgtcaagaaggtggagcaggaattcgaggtcaagctgcgcgag
atcggcgaacaggccaccttcgatatcggcgtgcatggcatcaatcccgaactggtccgc
cttctggggcacctgcaataccgtaccagttattcccagaacgtgctccagcactccctg
gaggtctccacgctgtgcggcatcatggctgcggaactgggcctcgacgtgaaaaaggcc
aagcgggcggggcttctgcacgacatcggcaaggccgtggaccacgagatcgagggaccc
cacgcggtcatcggggccgatttggccaagaaattcggcgagggcccggacatcatccac
gccatccaggcccaccacgaggacgtgccgcccaagtccatcctggccatcctggtccag
gccgcggacagcctctccggggcccggcccggggcccgcaaggaactcctggaaagctac
gtcaagcgcctggaggagctggaaaatctggccacggccttcgacggcgtgtccaaggcc
tacgccatccaggccgggcgcgagatccgggtggttgtggactccgacgccgtggacgac
gacaagacctttcttctgtgcaaggacatcgccaagcagatcgaggacaacctcacctat
ccgggacagattcgggtcacggtcatccgcgagcgccgggccgtgggctacgcgaaatag

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