Desulfolutivibrio sulfoxidireducens: GD604_07190
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Entry
GD604_07190 CDS
T06821
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dsx
Desulfolutivibrio sulfoxidireducens
Brite
KEGG Orthology (KO) [BR:
dsx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsx01011
]
GD604_07190
Enzymes [BR:
dsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GD604_07190
Peptidoglycan biosynthesis and degradation proteins [BR:
dsx01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GD604_07190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
HTH_23
SLT_2
Motif
Other DBs
NCBI-ProteinID:
QLA19538
LinkDB
All DBs
Position
complement(1641196..1643385)
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AA seq
729 aa
AA seq
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MPVYLAVMLCIFVFLAPGCGAKNQADKDNIDMRANLEPELWDARILEDIKRGRPLTEQEK
NALTSRGEIQFDLDVRETEEVQMFLQYFSMEKRGTMERWLVRAEPHLAYVRAVLLSFNLP
PDLIALPFIESGYNSMAYSHAGAGGMWQFMPYTGKRFGLTVDWWEDERRNPYKATVAAAK
YLTVLHEMFGDWHLALAAYNAGEGKVSRAMAKSGQTDFFDLAKNPALLKQETRHYVPKFL
AVLKIFQNLETLGFRPVNWQAGPTMKEVPVPGGTDLLAMAQAVGMDWERFHEANAGFRRQ
VSAPGRESTVYVPQAKYELAMAFLKDPGSRPPAGYQTYLAQSGETWWSVSRRTGIPVAAL
REFNAQAPDTLSSGVAIRIPASGSSKEAGLLAEFDGTGGPAEKSRAAAKHRVRKGESLQA
IAARYGVSLGELASANRLRTTSKVSIGRWLTIPDGGDVQVARSPALPKEVRQLASAESAG
SHTIQKGDTVSAISSRYGVTPKELMAANGIDSPNTLTIGKVLVIPGSETKSAQALVAKKS
AASYVVKKGDSLHAIARRFSLDPRTLLAANSLPAPDRLQAGMVLTIPGSGPTQAKPVTPT
PKPFQVAQFTPAPKAAPTPAQAAPKPLPSSALPNPAPTPTTTTAKAPSPAAPVRTAAKSP
AMAAPAVSAPAASAAKSAQNNVNYKVTQGETVWGIAKKFNVEPKALMSTNNLRDASTLRA
GDSLTIPRP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttatctcgccgtaatgctttgtatatttgtgtttctcgccccgggctgcggc
gcgaaaaaccaagccgataaagacaatatcgatatgcgggccaacctggagcccgaactc
tgggacgcgcgcatcctcgaagacatcaagcgcggacgccccctcaccgagcaggaaaaa
aacgccctgacctccaggggcgagatccaattcgatctggacgtgcgcgagaccgaggaa
gtccagatgttcctccagtacttctccatggagaaacgcggcaccatggaacgctggctg
gtccgcgccgaaccccatctggcctatgtccgggccgtgctgctcagcttcaacctgccg
ccggacctgatcgccctgccgtttatcgaatcgggctacaacagcatggcctattcccac
gccggcgccggcggcatgtggcagttcatgccctataccggaaagcggttcggcctgacc
gtggactggtgggaggacgagcgccgcaatccctacaaagccaccgtggccgccgccaag
tacctgaccgtgctgcatgagatgttcggggactggcatctggccctggccgcctacaac
gccggggaaggcaaagtctcccgggccatggccaaaagcggccagaccgacttcttcgac
ctggccaaaaacccggccctgctcaagcaggagacccgccactacgtgcccaagttcctg
gcggtgctgaaaatcttccagaatctggaaaccctgggctttcgacccgtcaactggcag
gccggtccgaccatgaaggaggtcccggtccccggcggcacggaccttttggccatggcc
caggccgtgggcatggactgggagcggttccacgaagccaacgccggcttccgccgccag
gtcagcgccccgggccgggaaagcaccgtctacgtgccccaggccaaatacgaactggcc
atggcatttctcaaggaccccggttcccgccccccggccggataccagacctatctggcc
caatccggcgaaacctggtggagcgtctcccggcgcacgggcatccccgtggccgccctg
cgggaattcaacgcccaggccccggacaccctgtcctcgggcgtggcgatccggattcca
gccagcgggtcgagcaaggaggcgggcctgctggcagaattcgacggaacggggggtccg
gccgagaagtcccgggccgcggccaaacaccgggtgcgcaagggtgaatccctccaggcc
atcgccgcgcgctacggcgtgtccctcggcgagctggcgtcggccaaccgcttacgaacc
acaagcaaggtttccatcggtcgctggctgaccatccccgacggcggggacgtccaggtg
gcccgttccccggccctgcccaaggaggtcaggcagctcgcctcggcggaaagcgccggc
agccacaccatccaaaaaggcgatacggtcagcgccatctcctcgcgctacggcgtgacg
cccaaagaactcatggccgcaaacggcatcgactccccgaacaccctgaccatcggcaag
gtcctggtcatccccggctcggagacgaaatcggcccaggccctggtggccaaaaaaagc
gccgcgtcctacgtggtcaaaaagggcgattccctccacgccatcgcccgtcgattctcc
ctcgaccccaggacgctgctcgcggccaattccctccccgctccggacaggctccaggcg
ggaatggtcctgaccattccgggctccggccccacccaggccaagccggtcacgcccacc
ccgaaacccttccaggtggcccagttcacccccgcgcccaaggccgcgccgacgccggcc
caggccgcccccaagcccctgccctcctcggccctgccaaatccggcgccgactcccacg
acaacgacggccaaggctccgtccccggccgccccggtgcggaccgccgccaagtccccg
gccatggccgccccggccgtttccgcaccagccgcttcggccgccaaatccgcccaaaac
aacgtcaactacaaggtgactcagggcgagaccgtgtggggcatcgccaaaaagttcaat
gtcgagcccaaggcgctgatgtccaccaacaacctccgggacgcctcgacgctacgggcc
ggggacagcctgaccatcccccgtccctga
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