Desulfolutivibrio sulfoxidireducens: GD604_08600
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Entry
GD604_08600 CDS
T06821
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dsx
Desulfolutivibrio sulfoxidireducens
Pathway
dsx03030
DNA replication
dsx03430
Mismatch repair
dsx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GD604_08600
03430 Mismatch repair
GD604_08600
03440 Homologous recombination
GD604_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsx03032
]
GD604_08600
03400 DNA repair and recombination proteins [BR:
dsx03400
]
GD604_08600
Enzymes [BR:
dsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GD604_08600
DNA replication proteins [BR:
dsx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GD604_08600
DNA repair and recombination proteins [BR:
dsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GD604_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QLA21615
LinkDB
All DBs
Position
1948785..1949543
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AA seq
252 aa
AA seq
DB search
MTGAIGPAGAAGSILTRLFRRLRPARVAPHPLITRHNERLADLDPDARLDACEFTVLDTE
LTGLDPRHEEIVSIGAVRVRSLRIVSRETFHVLVRPRKDLPKESTLIHRITPDQVRDRPR
LRHILPDFLEFVGTSLIVGHHVGLDMAFLNRAMDGIFGGRMGNPCLDTLRMAQIHRAEHW
ENYYDRYALNVSYALSDLALEWGLPLFPAHEALADAMQTAYLFLYLIKKIRGGRLETLSD
LYRAGRNWRWHS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgccatcggcccggcgggcgcggcgggatcgatcctgacgcgtcttttcaga
cgcctgcggcccgcgcgtgtcgcgccgcatccgctgatcacgaggcacaacgaacgcctt
gccgacctcgatccggacgcgcgtctggatgcgtgcgaattcacggtgctggatacggaa
ctgaccggactggacccgcgccacgaggagatcgtgtccatcggcgcggtgcgggtgcgc
agtctgcgcatcgtgtcccgtgagaccttccatgtcctggtgcggccgcgaaaggacctg
cccaaagagagcacgctcatccatcgcatcaccccggatcaggtccgggaccggccaagg
ctgcgtcacatccttccggactttctggaattcgtgggaacctcgctgatcgtggggcat
cacgtgggtctggacatggcctttttgaaccgggccatggacgggatattcggggggagg
atggggaatccgtgcctggataccctgcgcatggcccagatccaccgggccgagcactgg
gagaactactacgatcgctatgccttaaacgtgtcttatgccctgtccgatctggcgctg
gagtggggtctgccgctttttccggcccatgaggccctggccgacgccatgcagacggcg
tacctgtttttgtatctgatcaaaaagattcgcggcggcaggcttgagaccttgagcgac
ctgtaccgggccggccgcaactggcgctggcattcctga
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